Coexpression cluster: Cluster_31 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0098798 mitochondrial protein-containing complex 2.61% (3/115) 6.03 1.2e-05 0.001352
GO:0098800 inner mitochondrial membrane protein complex 2.61% (3/115) 6.27 7e-06 0.001569
GO:0046390 ribose phosphate biosynthetic process 1.74% (2/115) 5.82 0.00055 0.006841
GO:0009260 ribonucleotide biosynthetic process 1.74% (2/115) 5.82 0.00055 0.006841
GO:0009152 purine ribonucleotide biosynthetic process 1.74% (2/115) 5.82 0.00055 0.006841
GO:0009205 purine ribonucleoside triphosphate metabolic process 1.74% (2/115) 5.97 0.000441 0.007052
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 1.74% (2/115) 5.97 0.000441 0.007052
GO:0009199 ribonucleoside triphosphate metabolic process 1.74% (2/115) 5.97 0.000441 0.007052
GO:0009145 purine nucleoside triphosphate biosynthetic process 1.74% (2/115) 5.97 0.000441 0.007052
GO:0009201 ribonucleoside triphosphate biosynthetic process 1.74% (2/115) 5.97 0.000441 0.007052
GO:0009141 nucleoside triphosphate metabolic process 1.74% (2/115) 5.97 0.000441 0.007052
GO:0015985 energy coupled proton transport, down electrochemical gradient 1.74% (2/115) 5.97 0.000441 0.007052
GO:0009144 purine nucleoside triphosphate metabolic process 1.74% (2/115) 5.97 0.000441 0.007052
GO:0009142 nucleoside triphosphate biosynthetic process 1.74% (2/115) 5.97 0.000441 0.007052
GO:0015986 ATP synthesis coupled proton transport 1.74% (2/115) 5.97 0.000441 0.007052
GO:0006754 ATP biosynthetic process 1.74% (2/115) 5.97 0.000441 0.007052
GO:0003712 transcription coregulator activity 1.74% (2/115) 5.68 0.00067 0.00715
GO:0006164 purine nucleotide biosynthetic process 1.74% (2/115) 5.68 0.00067 0.00715
GO:0015318 inorganic molecular entity transmembrane transporter activity 2.61% (3/115) 4.11 0.000709 0.007217
GO:0022890 inorganic cation transmembrane transporter activity 2.61% (3/115) 4.27 0.000516 0.007708
GO:0008324 cation transmembrane transporter activity 2.61% (3/115) 4.14 0.000667 0.007865
GO:0015075 ion transmembrane transporter activity 2.61% (3/115) 4.0 0.000892 0.008688
GO:0072522 purine-containing compound biosynthetic process 1.74% (2/115) 5.44 0.000946 0.008831
GO:0032991 protein-containing complex 4.35% (5/115) 2.68 0.001146 0.010272
GO:0009165 nucleotide biosynthetic process 1.74% (2/115) 5.23 0.001268 0.010518
GO:1901293 nucleoside phosphate biosynthetic process 1.74% (2/115) 5.23 0.001268 0.010518
GO:1901137 carbohydrate derivative biosynthetic process 1.74% (2/115) 5.14 0.001446 0.011565
GO:0015078 proton transmembrane transporter activity 2.61% (3/115) 4.68 0.000219 0.016333
GO:0090407 organophosphate biosynthetic process 1.74% (2/115) 4.68 0.002744 0.021198
GO:0098662 inorganic cation transmembrane transport 1.74% (2/115) 4.33 0.004429 0.023072
GO:0098660 inorganic ion transmembrane transport 1.74% (2/115) 4.33 0.004429 0.023072
GO:0006163 purine nucleotide metabolic process 1.74% (2/115) 4.33 0.004429 0.023072
GO:0098655 cation transmembrane transport 1.74% (2/115) 4.33 0.004429 0.023072
GO:0010038 response to metal ion 0.87% (1/115) 8.14 0.003543 0.023342
GO:0097526 spliceosomal tri-snRNP complex 0.87% (1/115) 8.14 0.003543 0.023342
GO:0046540 U4/U6 x U5 tri-snRNP complex 0.87% (1/115) 8.14 0.003543 0.023342
GO:0034220 ion transmembrane transport 1.74% (2/115) 4.28 0.004746 0.023626
GO:0019693 ribose phosphate metabolic process 1.74% (2/115) 4.39 0.004122 0.023676
GO:0009150 purine ribonucleotide metabolic process 1.74% (2/115) 4.39 0.004122 0.023676
GO:0009259 ribonucleotide metabolic process 1.74% (2/115) 4.39 0.004122 0.023676
GO:0022857 transmembrane transporter activity 2.61% (3/115) 3.16 0.004733 0.024094
GO:0046034 ATP metabolic process 1.74% (2/115) 4.44 0.003826 0.024484
GO:0005215 transporter activity 2.61% (3/115) 3.11 0.005161 0.024596
GO:0072521 purine-containing compound metabolic process 1.74% (2/115) 4.23 0.005073 0.024706
GO:0098796 membrane protein complex 2.61% (3/115) 3.23 0.004069 0.025316
GO:0034654 nucleobase-containing compound biosynthetic process 2.61% (3/115) 3.08 0.005459 0.025474
GO:0140513 nuclear protein-containing complex 1.74% (2/115) 4.5 0.00354 0.025576
GO:1902600 proton transmembrane transport 1.74% (2/115) 4.5 0.00354 0.025576
GO:0010035 response to inorganic substance 0.87% (1/115) 7.14 0.007074 0.025975
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 0.87% (1/115) 7.14 0.007074 0.025975
GO:0005751 mitochondrial respiratory chain complex IV 0.87% (1/115) 7.14 0.007074 0.025975
GO:0045277 respiratory chain complex IV 0.87% (1/115) 7.14 0.007074 0.025975
GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) 0.87% (1/115) 7.14 0.007074 0.025975
GO:0098599 palmitoyl hydrolase activity 0.87% (1/115) 7.14 0.007074 0.025975
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 0.87% (1/115) 7.14 0.007074 0.025975
GO:0120114 Sm-like protein family complex 0.87% (1/115) 7.14 0.007074 0.025975
GO:0097525 spliceosomal snRNP complex 0.87% (1/115) 7.14 0.007074 0.025975
GO:0030532 small nuclear ribonucleoprotein complex 0.87% (1/115) 7.14 0.007074 0.025975
GO:0018130 heterocycle biosynthetic process 2.61% (3/115) 2.93 0.007281 0.026305
GO:0006139 nucleobase-containing compound metabolic process 3.48% (4/115) 2.35 0.008154 0.028099
GO:0055086 nucleobase-containing small molecule metabolic process 1.74% (2/115) 3.89 0.008049 0.028173
GO:1901362 organic cyclic compound biosynthetic process 2.61% (3/115) 2.88 0.008022 0.028524
GO:0019438 aromatic compound biosynthetic process 2.61% (3/115) 2.96 0.006926 0.030421
GO:0009117 nucleotide metabolic process 1.74% (2/115) 4.01 0.00686 0.030733
GO:0006753 nucleoside phosphate metabolic process 1.74% (2/115) 4.01 0.00686 0.030733
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 0.87% (1/115) 6.56 0.010592 0.032062
GO:0000375 RNA splicing, via transesterification reactions 0.87% (1/115) 6.56 0.010592 0.032062
GO:0003714 transcription corepressor activity 0.87% (1/115) 6.56 0.010592 0.032062
GO:0000398 mRNA splicing, via spliceosome 0.87% (1/115) 6.56 0.010592 0.032062
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 0.87% (1/115) 6.56 0.010592 0.032062
GO:0140110 transcription regulator activity 1.74% (2/115) 3.75 0.009768 0.032178
GO:0006725 cellular aromatic compound metabolic process 3.48% (4/115) 2.27 0.00976 0.03263
GO:0046483 heterocycle metabolic process 3.48% (4/115) 2.28 0.009619 0.032646
GO:1901360 organic cyclic compound metabolic process 3.48% (4/115) 2.25 0.010191 0.033085
GO:0019637 organophosphate metabolic process 1.74% (2/115) 3.53 0.013129 0.039213
GO:0004129 cytochrome-c oxidase activity 0.87% (1/115) 6.14 0.014098 0.039474
GO:0016675 oxidoreductase activity, acting on a heme group of donors 0.87% (1/115) 6.14 0.014098 0.039474
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 0.87% (1/115) 6.14 0.014098 0.039474
GO:0005261 cation channel activity 0.87% (1/115) 6.14 0.014098 0.039474
GO:0015252 proton channel activity 0.87% (1/115) 6.14 0.014098 0.039474
GO:0006812 cation transport 1.74% (2/115) 3.36 0.016353 0.044132
GO:1901135 carbohydrate derivative metabolic process 1.74% (2/115) 3.36 0.016353 0.044132
GO:0005575 cellular_component 6.09% (7/115) 1.42 0.016105 0.044539
GO:1901567 fatty acid derivative binding 0.87% (1/115) 5.82 0.017591 0.044778
GO:0120227 acyl-CoA binding 0.87% (1/115) 5.82 0.017591 0.044778
GO:0006357 regulation of transcription by RNA polymerase II 0.87% (1/115) 5.82 0.017591 0.044778
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 0.87% (1/115) 5.82 0.017591 0.044778
GO:0000062 fatty-acyl-CoA binding 0.87% (1/115) 5.82 0.017591 0.044778
GO:0006811 ion transport 1.74% (2/115) 3.23 0.019269 0.048498
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_25 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_44 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_53 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_117 0.059 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_132 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_137 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_213 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_217 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_226 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_230 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_254 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_262 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_23 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_30 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_58 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_72 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_97 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_106 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_137 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_151 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_176 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_4 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_5 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_9 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_32 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_70 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_79 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_104 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_105 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_110 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_117 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_118 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_155 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_166 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_171 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_175 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_67 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_112 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_134 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_169 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_210 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_35 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_88 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_157 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_165 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (115) (download table)

InterPro Domains

GO Terms

Family Terms