Coexpression cluster: Cluster_9 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 32.9% (51/155) 1.09 0.0 1.7e-05
GO:0005515 protein binding 13.55% (21/155) 1.54 1.1e-05 0.0012
GO:0006139 nucleobase-containing compound metabolic process 9.03% (14/155) 1.94 1.9e-05 0.001219
GO:0003674 molecular_function 42.58% (66/155) 0.67 1.5e-05 0.001228
GO:0006270 DNA replication initiation 1.94% (3/155) 6.02 9e-06 0.00143
GO:0090304 nucleic acid metabolic process 7.74% (12/155) 2.04 3.9e-05 0.001811
GO:0007034 vacuolar transport 1.94% (3/155) 5.44 3.6e-05 0.001968
GO:0046483 heterocycle metabolic process 9.03% (14/155) 1.8 5.5e-05 0.002015
GO:0006725 cellular aromatic compound metabolic process 9.03% (14/155) 1.81 5e-05 0.002046
GO:1901360 organic cyclic compound metabolic process 9.03% (14/155) 1.76 7.2e-05 0.002355
GO:1901363 heterocyclic compound binding 19.35% (30/155) 1.05 9e-05 0.002451
GO:0097159 organic cyclic compound binding 19.35% (30/155) 1.05 9e-05 0.002451
GO:0003676 nucleic acid binding 10.97% (17/155) 1.4 0.000255 0.00641
GO:0003724 RNA helicase activity 1.29% (2/155) 6.02 0.000348 0.007118
GO:0004345 glucose-6-phosphate dehydrogenase activity 1.29% (2/155) 6.02 0.000348 0.007118
GO:0008186 ATP-dependent activity, acting on RNA 1.29% (2/155) 6.02 0.000348 0.007118
GO:0009057 macromolecule catabolic process 2.58% (4/155) 3.53 0.000391 0.007514
GO:0006259 DNA metabolic process 3.87% (6/155) 2.61 0.000468 0.008504
GO:0030145 manganese ion binding 1.29% (2/155) 5.7 0.000578 0.009442
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 1.29% (2/155) 5.7 0.000578 0.009442
GO:0034641 cellular nitrogen compound metabolic process 9.03% (14/155) 1.4 0.000884 0.013769
GO:0006402 mRNA catabolic process 1.29% (2/155) 5.22 0.001201 0.017069
GO:0000956 nuclear-transcribed mRNA catabolic process 1.29% (2/155) 5.22 0.001201 0.017069
GO:0019001 guanyl nucleotide binding 3.23% (5/155) 2.56 0.001606 0.018109
GO:0006401 RNA catabolic process 1.29% (2/155) 5.02 0.001593 0.0186
GO:0006302 double-strand break repair 1.29% (2/155) 5.02 0.001593 0.0186
GO:0000272 polysaccharide catabolic process 1.29% (2/155) 5.02 0.001593 0.0186
GO:0016161 beta-amylase activity 1.29% (2/155) 5.02 0.001593 0.0186
GO:0036094 small molecule binding 12.26% (19/155) 1.1 0.001379 0.018794
GO:1901265 nucleoside phosphate binding 11.61% (18/155) 1.1 0.001919 0.020247
GO:0000166 nucleotide binding 11.61% (18/155) 1.1 0.001919 0.020247
GO:0003677 DNA binding 5.16% (8/155) 1.73 0.002949 0.030137
GO:0006006 glucose metabolic process 1.29% (2/155) 4.56 0.003081 0.030535
GO:0010629 negative regulation of gene expression 1.29% (2/155) 4.44 0.003679 0.035385
GO:0010468 regulation of gene expression 3.87% (6/155) 2.01 0.003913 0.036562
GO:0034655 nucleobase-containing compound catabolic process 1.29% (2/155) 4.32 0.004326 0.039297
GO:0050789 regulation of biological process 5.16% (8/155) 1.62 0.004763 0.042094
GO:0060255 regulation of macromolecule metabolic process 3.87% (6/155) 1.93 0.00511 0.042843
GO:0003723 RNA binding 3.87% (6/155) 1.94 0.004991 0.04295
GO:0065007 biological regulation 5.16% (8/155) 1.59 0.005465 0.043588
GO:0019222 regulation of metabolic process 3.87% (6/155) 1.92 0.005353 0.043762
GO:0005680 anaphase-promoting complex 0.65% (1/155) 7.02 0.007682 0.04407
GO:0006177 GMP biosynthetic process 0.65% (1/155) 7.02 0.007682 0.04407
GO:0031683 G-protein beta/gamma-subunit complex binding 0.65% (1/155) 7.02 0.007682 0.04407
GO:0046037 GMP metabolic process 0.65% (1/155) 7.02 0.007682 0.04407
GO:0003922 GMP synthase (glutamine-hydrolyzing) activity 0.65% (1/155) 7.02 0.007682 0.04407
GO:0010011 auxin binding 0.65% (1/155) 7.02 0.007682 0.04407
GO:0042562 hormone binding 0.65% (1/155) 7.02 0.007682 0.04407
GO:0000152 nuclear ubiquitin ligase complex 0.65% (1/155) 7.02 0.007682 0.04407
GO:0070449 elongin complex 0.65% (1/155) 7.02 0.007682 0.04407
GO:0035299 inositol pentakisphosphate 2-kinase activity 0.65% (1/155) 7.02 0.007682 0.04407
GO:0050896 response to stimulus 2.58% (4/155) 2.35 0.007954 0.044842
GO:0019318 hexose metabolic process 1.29% (2/155) 4.12 0.005765 0.044888
GO:0044270 cellular nitrogen compound catabolic process 1.29% (2/155) 3.85 0.008275 0.045101
GO:1901361 organic cyclic compound catabolic process 1.29% (2/155) 3.85 0.008275 0.045101
GO:0010605 negative regulation of macromolecule metabolic process 1.29% (2/155) 3.78 0.009203 0.047767
GO:0009892 negative regulation of metabolic process 1.29% (2/155) 3.78 0.009203 0.047767
GO:0050661 NADP binding 1.29% (2/155) 3.78 0.009203 0.047767
GO:0032561 guanyl ribonucleotide binding 2.58% (4/155) 2.26 0.009993 0.049513
GO:0005525 GTP binding 2.58% (4/155) 2.26 0.009993 0.049513
GO:0009056 catabolic process 2.58% (4/155) 2.26 0.009993 0.049513
GO:0004519 endonuclease activity 1.29% (2/155) 3.7 0.010174 0.049656
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_17 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_40 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_46 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_79 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_109 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_110 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_121 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_181 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_183 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_205 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_224 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_238 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_26 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_76 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_83 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_112 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_22 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_55 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_71 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_80 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_87 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_88 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_89 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_104 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_125 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_146 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_148 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_162 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_165 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_47 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_114 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_141 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_149 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_175 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_197 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_259 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_262 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_277 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_16 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_19 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_25 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_28 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_31 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_32 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_48 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_63 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_80 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_97 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_104 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_106 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_113 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_185 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_190 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_197 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (155) (download table)

InterPro Domains

GO Terms

Family Terms