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Heatmap: Cluster_213 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Archegoniophore (female)
Antheridiophore (male)
Antheridium (male)
Sperm
Sporeling
Thallus
Thallus (vegetative)
Thallus (MpPAP1OX-1)
Thallus (Tak1-2)
Thallus (MpPAP1OX-3)
Thallus (MpPAP1OX-2)
Thallus (Tak1-3)
mid rib (male)
Gametophyte
Gemmaling (female, hpt2040)
Gemmaling (male, hpt2040)
Gemmaling (BC3-38)
Gemmaling (Tak1)
Gemmaling
Gemma cup
gemma cup (male)
Aseptically grown rhizoids, thalloid, gemmae
Control
Cold (3°C)
Dark (3 days)
Heat (33°C)
Light (435 uEm-2s-1)
Osmotic (100 mM mannitol)
Nitrogen deficiency (0 mM KNO3)
Salt (40 mM NaCl)
Cold-Dark
Cold-Light
Cold-Mannitol
Cold-Nitrogen deficiency
Cold-Salt
Heat-Dark
Heat-Mannitol
Heat-Nitrogen deficiency
Heat-Salt
Light-Salt
Mannitol-Dark
Mannitol-Light
Mannitol-Nitrogen deficiency
Nitrogen deficiency-Dark
Nitrogen deficiency-Light
Salt-Dark
Salt-Mannitol
Salt-Nitrogen deficiency
ZT2 (2 hours after light)
ZT6 (6 hours after light)
ZT10 (10 hours after light)
ZT14 (2 hours after dark)
ZT18 (6 hours after dark)
ZT22 (10 hours after dark)
1.62 - - 5.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.57 - 1.79 5.5 - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.09 - - - - - -1.13 - - - - - - -1.0 - - -1.1 - - - - - -
1.65 1.39 - 5.53 - -4.08 -0.26 - - - - - - -0.13 - - - - - - - - - - - - - - - - - - - -2.28 - - - - - - - - - - - - - - - - - - - -
2.66 - - 5.5 - - - - - - - - - - - - - - - - - - - - - - - - - - -0.59 -0.71 - - -0.64 - -0.83 - - - - - - - - - - - - - - - - -
2.83 - - 5.49 - - - - - - - - - - - - - - - - - - - - - - - - 0.83 - - - - - - - - - - - - - - - - - - - - - - - - -
2.69 - - 5.54 -2.94 - - - - - - - - - - - - - - - - - - - - - - - -0.36 - - - - - - - - - - - - - - - - - - - - - - - - -
2.31 - - 5.62 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.15 - - 5.63 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.77 - - 5.62 -1.64 - - - - - - - - 0.24 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.14 - - 5.62 -1.6 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.63 - - 5.51 - - - - - - - - - - - - - - - - - 2.82 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.