Heatmap: Cluster_182 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Archegoniophore (female)	Antheridiophore (male)	Antheridium (male)	Sperm	Sporeling	Thallus	Thallus (vegetative)	Thallus (MpPAP1OX-1)	Thallus (Tak1-2)	Thallus (MpPAP1OX-3)	Thallus (MpPAP1OX-2)	Thallus (Tak1-3)	mid rib (male)	Gametophyte	Gemmaling (female, hpt2040)	Gemmaling (male, hpt2040)	Gemmaling (BC3-38)	Gemmaling (Tak1)	Gemmaling	Gemma cup	gemma cup (male)	Aseptically grown rhizoids, thalloid, gemmae	Control	Cold (3Â°C)	Dark (3 days)	Heat (33Â°C)	Light (435 uEm-2s-1)	Osmotic (100 mM mannitol)	Nitrogen deficiency (0 mM KNO3)	Salt (40 mM NaCl)	Cold-Dark	Cold-Light	Cold-Mannitol	Cold-Nitrogen deficiency	Cold-Salt	Heat-Dark	Heat-Mannitol	Heat-Nitrogen deficiency	Heat-Salt	Light-Salt	Mannitol-Dark	Mannitol-Light	Mannitol-Nitrogen deficiency	Nitrogen deficiency-Dark	Nitrogen deficiency-Light	Salt-Dark	Salt-Mannitol	Salt-Nitrogen deficiency	ZT2 (2 hours after light)	ZT6 (6 hours after light)	ZT10 (10 hours after light)	ZT14 (2 hours after dark)	ZT18 (6 hours after dark)	ZT22 (10 hours after dark)
Mp1g01920.1	-	-	-	5.29	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.89	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp2g06600.1	-	-	-	4.89	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.5	4.1	-	2.12	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp2g08110.1	1.95	-	-	4.97	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.58	-	-	-	-	-	-	-	-	-	-	1.52	3.52	0.53	0.69	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp2g15960.1	-	-	-	5.03	-	-	-	-	-	-	-	-	-	0.21	-	-	-	-	-	2.49	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.49	1.77	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp2g24480.1	-	-	-	4.77	-	-2.62	1.61	-	-	-	-	-	-	-0.53	-	-	-	-	-	-	-	-	-	-1.63	-	1.35	0.49	-	-	0.01	-	-2.12	-	-	-	-0.41	1.05	3.43	1.58	-	-	-	-	-	-0.47	-	-	-	-	-	-	-	-	-
Mp2g24570.1	-	-	-	4.93	-	-2.08	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.48	-	-	-	-	-	-	-	3.93	-	-	-	-	-	-	2.35	-	-	-	-	-	-	-	-	-
Mp3g07370.1	-	-	-	5.19	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.02	-	-	3.22	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp3g22340.1	-	-	-	4.91	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.54	-	2.42	2.36	-	2.93	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp5g04460.1	-	-	-	4.9	-	-	-	-	-	-	-	-	-	-0.77	-	-	-	-	-	-	-	-	-	-	-	1.77	-	-	-	-	-	-	-	-	-	1.3	-0.51	3.75	1.79	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp7g13140.1	-	-	-	4.51	-0.99	-1.1	0.85	-	-	-	-	-	-	-1.49	-	-	-	-	-	-	-	-	-	0.82	-	0.39	-	-	0.66	-	-	-0.14	-	-	-1.03	1.88	-1.21	3.16	0.37	0.94	-	-	0.78	-	-1.04	-	-1.05	-1.05	-0.98	-	-	0.48	-0.72	-
Mp7g16840.1	-	-	-	5.41	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.51	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp7g18650.1	-	-	-	5.21	-	-	1.7	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.77	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp8g02060.1	-	-	-	5.28	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.91	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Mp8g13130.1	-	-	-	5.22	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.7	-	-	-	-	-	-	-	-	-	-	2.75	-	-	-	2.74	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.