Heatmap: Cluster_127 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
1.55 2.68 1.31 0.48 -1.9 -3.05 -1.59 -4.71 2.86 -1.75 -5.98 - -4.85 -5.84 -1.72 3.1 2.16 -0.1 -3.14 - -5.13 -3.44 - 2.33 -1.68 2.36 -1.17 -4.71 - -3.59 -4.93 - -4.71 -5.11 - -4.88 -3.52 -2.57 - -4.06 - - -5.55 -3.63 -5.41 -3.56 -2.78 -4.64
1.78 2.96 1.13 0.51 -2.11 - - -3.31 2.07 - - - - - -4.89 3.81 2.97 -1.17 - - - - - -2.42 - 2.6 - - - -3.7 - - - - - - - - - - - - - - - - - -
1.26 3.15 1.24 1.25 -3.17 -6.23 - -6.03 2.74 -8.66 - - - - -5.11 3.24 2.82 -0.22 - - - - - -1.45 -4.64 2.67 -6.17 -7.71 -3.91 -2.43 -6.96 -2.75 -7.06 -2.92 -2.22 -5.54 -5.53 -4.61 -7.31 - -6.93 -6.11 - -6.74 -7.89 -5.31 -5.05 -6.48
1.52 3.06 1.26 1.16 -2.62 -5.18 - -6.24 3.13 -7.35 - -7.76 - - -4.97 3.39 2.47 -0.4 - - - - - -1.88 -3.77 2.42 -6.88 -7.06 -3.73 -2.84 - -3.98 -6.83 -3.48 -2.27 -7.61 -6.56 -5.45 - -7.09 -7.1 -5.73 - - -7.84 -6.63 -6.25 -7.0
1.21 2.29 1.4 0.2 -0.48 -1.27 -1.5 -0.16 2.32 0.87 -5.94 -5.27 -0.1 0.46 0.18 2.69 1.83 -0.32 -2.46 0.65 0.93 0.19 -4.48 -1.42 -4.14 1.92 -5.52 -6.54 -5.56 -2.32 -3.52 -5.45 -3.04 -4.12 -6.98 -5.56 -4.21 -0.38 -5.29 -0.35 -5.74 -3.79 -0.03 -1.97 -3.01 -0.57 -3.52 -4.13
1.6 3.12 1.5 0.81 -3.16 -8.06 -6.56 -6.26 2.84 -9.29 -9.07 -6.51 -9.07 -9.47 -5.41 3.42 2.44 -0.02 - -8.09 - -9.5 - -1.11 -6.0 2.67 -7.61 -7.98 -5.17 -4.19 -8.5 -4.96 -8.19 -5.0 -3.81 -6.8 -8.4 -5.61 -9.41 -10.46 -6.03 -6.66 -9.32 -10.62 -9.42 -5.42 -7.06 -5.31
1.31 3.19 1.48 0.7 -3.6 - - - 1.9 - - - - - -5.33 3.84 2.46 -1.02 - - - - - -0.86 -2.36 2.63 - -3.39 -2.31 -3.59 - -3.64 -4.54 -3.27 -1.88 - - - - - - - - - - - - -
- 3.61 1.02 1.62 -3.18 - - - 2.14 - - - - - -6.23 3.89 3.13 -1.41 - - - - - - - 1.12 - - - -6.26 - - - - - - - - - - - - - - - - - -
1.31 3.11 1.96 0.71 -2.37 -12.08 -8.7 -8.94 2.41 - - - -12.37 -11.4 -5.43 3.66 2.69 0.07 - - - - -10.81 -0.84 -10.08 2.35 -10.42 -12.61 -11.31 -5.27 -13.58 -11.28 -13.77 -11.42 -9.97 -12.64 -12.8 - -12.17 - -12.34 -11.49 -11.84 - - -12.84 -12.35 -9.93
0.6 2.96 1.62 0.6 -2.36 -5.54 -5.18 -5.06 2.7 -4.75 -3.88 -1.34 -5.39 -6.24 -5.68 3.48 2.56 -0.3 - - - - - -1.03 -6.23 2.4 -4.71 -6.25 -0.39 -5.12 -5.83 -6.7 -6.44 -5.04 0.92 -3.99 -6.25 -4.19 - -6.62 - -5.26 -6.02 - - -3.15 - -6.56
1.39 3.07 1.76 0.68 -2.88 -6.54 -6.01 -6.45 2.6 -9.47 -5.98 -5.53 -8.49 - -5.56 3.41 2.32 -0.41 - - -9.52 - - -1.49 -8.31 2.35 -10.24 -8.42 -5.97 -5.39 -10.7 -8.06 -0.79 -9.19 -4.18 0.37 0.2 -8.77 - - -7.87 -7.7 -9.97 - -8.87 -7.84 -8.08 -0.58
-0.53 3.77 1.47 0.96 -2.04 - - - 2.49 - - - - - -4.28 3.5 2.37 -0.91 - - - - - - - 2.58 - - - -4.43 - - - - - - - - - - - - - - - - - -
0.99 2.93 1.28 0.76 -2.05 -3.84 - -3.35 2.5 -1.33 -0.38 0.09 -1.67 -2.36 -2.89 2.81 2.18 -0.19 -4.13 -3.68 -4.57 -3.57 -3.42 2.1 -1.38 2.21 -1.24 -5.03 -4.91 -3.29 -4.43 -3.87 -5.65 -3.98 -6.67 - - -1.44 -6.29 -3.9 -1.15 -1.38 -2.83 -2.6 -4.44 -0.57 -4.69 -3.54
1.99 3.19 1.24 1.08 -2.75 - -5.33 -5.64 3.15 -7.72 - -7.16 -6.49 -7.3 -5.04 3.27 2.31 -0.61 -7.33 - - - - -1.51 -7.29 2.44 -8.41 - -5.0 -4.74 -7.08 - -9.13 -6.53 -6.58 -8.38 -7.09 -8.59 - -6.49 -5.78 -6.33 -6.36 -7.97 - -7.33 -7.24 -8.19
0.78 3.23 1.42 0.61 -2.95 -7.16 -5.65 -9.21 2.43 -7.74 -7.99 - -7.09 -9.29 -5.37 3.37 2.72 -0.16 -4.72 -7.02 -9.13 -5.45 -8.43 -1.0 -5.34 2.26 -6.53 -6.11 -3.79 -2.59 -5.99 -2.4 -3.9 -0.21 -1.05 -3.27 -2.87 -4.27 -5.39 -4.81 -1.42 -1.13 -3.01 -6.92 -6.86 -4.27 -2.32 -1.07
-0.73 3.09 1.68 1.35 -2.0 - -3.74 - 2.5 - - - - - -6.02 3.86 2.59 -0.24 - - - - - -2.16 -3.7 2.42 - - - -4.52 - - - - - - - - - - -3.49 - - - - - - -
1.58 3.25 1.57 1.1 -2.67 - -4.23 - 3.06 - - - - - -4.43 3.2 2.44 -0.03 - - - - - -1.44 - 2.53 - - - -5.97 - - - - - - - - - - - - - - - - - -
1.18 2.97 1.71 1.0 -1.85 - - - 2.06 - - - - -5.15 -5.85 3.89 2.84 0.2 - - - - - -1.5 - 2.22 - - - -5.49 - - - - - - - - - - - - - - - - - -
2.76 2.72 1.54 1.04 -1.26 - - - 3.02 - - - - - -4.84 3.59 2.2 -1.35 - - - - - -3.38 - 2.01 - - - -6.89 - - - - - - - - - - - - - - - - - -
0.94 3.19 1.26 1.36 -2.57 -6.66 -6.03 -7.28 2.92 - - -6.35 - - -5.11 3.66 2.79 -0.75 -2.71 -4.76 -5.63 -4.19 - -2.86 -6.37 1.84 -7.02 - - -5.82 - - - - - - - - - - - - - - - - - -
1.7 2.96 2.25 0.99 -2.2 -2.41 -3.5 - 2.39 -7.78 - - - - -5.87 3.66 2.76 -0.57 -2.65 -3.83 -6.87 -4.27 - -1.36 - 1.85 - - - -5.12 - - - - -6.93 - - - - - - - - - - - - -5.89
1.98 3.28 1.25 0.75 -3.03 - -7.73 -6.62 3.08 - - - - - -4.95 3.4 2.38 -0.68 - - - - - -2.05 -7.69 2.33 - - - -5.27 - - - -8.03 - - - - - - - - - - - - - -
0.76 2.91 0.88 1.29 -2.4 -1.85 -1.68 -2.53 3.19 -3.18 -0.33 -0.76 -3.64 -5.15 -4.23 3.39 2.2 -0.83 -2.89 -4.02 -3.98 -3.74 -7.73 -0.99 -3.03 1.92 -4.46 -1.21 -2.32 -2.88 -3.2 -3.29 -4.46 -3.63 -6.29 -5.66 -5.5 -3.47 -4.84 -2.08 -2.75 -2.75 -2.7 -3.79 -4.37 -4.16 -3.85 -3.12
1.5 2.94 1.75 0.16 -1.83 -11.53 -4.51 -3.98 2.56 - - - - - -4.88 3.14 2.5 0.88 - - - - - 0.06 -7.11 3.13 -6.55 - -5.05 -3.65 - -3.53 - -5.58 -4.25 -6.16 - -4.37 - - -6.22 -4.8 -6.73 -7.01 -6.16 -6.25 -6.53 -3.69
1.52 3.24 1.32 0.9 -1.19 -2.28 -1.5 -2.48 2.85 -5.81 - - - - -4.17 3.14 2.55 -0.74 - - - - - -1.48 -3.59 2.55 -4.48 - -3.79 -4.42 -3.91 - -3.61 -5.26 -2.76 -5.0 -2.99 -3.24 - - -2.25 -3.33 -2.6 -5.49 - - - -3.68
1.48 2.86 2.19 1.09 -1.72 -5.87 -3.21 - 2.86 - -5.58 -2.27 - - -4.87 3.05 2.63 -0.07 - - - - - -0.83 -4.35 2.46 -6.9 - -3.14 -5.29 - - -5.69 -5.28 -2.12 - - -6.43 - - -6.12 - - -6.01 -6.53 -5.36 - 0.32
-0.26 2.8 0.63 1.48 -1.46 -0.34 -2.46 -1.94 3.69 - - - - - -5.76 3.4 2.47 -1.64 - - - - - - - 2.28 - - - -4.25 - - - - - - - - - - - - - - - - - -
1.08 3.2 1.04 1.22 -0.39 -2.01 -2.44 -2.64 2.68 -6.31 - - -8.18 - -5.35 2.87 2.3 0.74 -5.61 -3.89 -7.53 -4.73 -6.83 -0.15 -3.59 3.15 -6.55 -5.59 -4.64 -3.52 -8.6 -6.0 -5.49 -3.62 -3.29 -5.18 -3.95 -5.62 - -5.37 - -6.7 -6.44 -6.24 -7.3 -5.56 -6.52 -4.55
1.02 3.23 0.89 1.11 -2.82 -6.27 -8.07 -5.77 3.06 -8.71 -9.23 -9.53 - -7.97 -4.99 3.46 2.69 -0.74 -8.11 - - - - -2.35 -5.66 2.4 -7.4 -7.52 -5.5 -3.43 -7.8 -4.55 -6.84 -3.4 -3.65 -6.61 -5.56 -5.9 -8.7 -9.46 - -7.44 -7.36 - -9.61 -5.97 -6.79 -6.09
1.5 2.78 1.4 1.69 -0.78 -3.07 -1.26 -1.99 2.56 0.18 -2.23 -1.38 -1.24 -1.9 -1.71 2.48 2.12 -0.85 - -4.88 - - - -1.09 -4.46 1.63 - -0.79 -0.59 -1.84 -0.51 -1.58 -2.75 -1.28 - -2.66 -1.58 0.28 -4.47 -2.71 0.02 -0.52 -3.07 -3.94 -3.99 -0.13 -3.09 -1.58
1.59 3.18 1.38 0.92 -2.98 - -8.51 -5.57 2.98 - -8.45 - -7.95 - -5.12 3.38 2.36 0.0 - -8.35 - -9.37 - -1.25 -5.39 2.61 -7.35 -8.11 -6.75 -3.27 -8.85 -6.56 -9.78 -5.81 -4.61 - -9.2 -7.61 - - -7.99 -9.13 - -8.62 - -8.97 -8.28 -8.2
1.44 3.42 0.49 1.05 -2.53 -1.48 -0.35 -3.16 2.99 - - -6.33 - - -4.65 3.27 2.42 -0.81 - - - - - -3.42 - 2.59 - - - -5.46 - - - - - - - - - - - - - - - - - -7.56
0.3 3.16 0.61 0.63 0.05 0.74 0.28 0.34 2.87 -0.84 -1.68 -1.76 -1.58 -3.0 -0.45 2.84 2.06 -0.73 -4.11 -1.73 -1.14 -1.94 - -2.55 -2.86 2.09 -3.54 -5.18 -4.81 -2.78 -3.39 -2.28 -5.19 -5.24 -6.9 -4.14 -3.34 -2.49 -6.75 -2.96 -4.19 -5.95 -3.06 -1.35 -4.14 -2.29 -2.2 -3.18
1.07 3.33 1.95 0.88 -1.81 -3.1 -1.37 - 3.16 -5.57 - - - - -5.85 3.17 2.28 -0.71 - - - -4.46 - -1.48 - 2.42 - - -5.02 -5.18 - - - -5.2 - - - - - - - - - - - - - -4.56
-2.89 2.98 1.44 1.22 -1.43 - - - 3.48 -7.57 - - - - -4.74 3.28 2.98 -0.84 - -2.54 -5.08 - - -2.15 - 2.26 - - - -5.95 - - - - - - - - - - - - - - - - - -
1.55 2.9 1.49 0.54 -1.28 -1.58 -0.57 -2.08 2.96 -5.75 - - - - -4.85 3.22 2.47 -0.15 - - - - - -1.98 -5.52 2.92 - - - -4.87 - -4.17 - -4.28 -5.36 - - - - -4.63 - - - - - - - -4.47
0.9 3.06 1.07 2.14 -3.97 -3.32 -1.42 - 2.13 - - - - - -5.58 3.66 3.14 -0.03 - - - - - -2.18 - 1.88 - - - -6.67 - - - - - - - - - - - - - - - - - -
0.74 3.09 1.54 0.91 -2.46 -3.95 - - 3.25 -6.54 - -5.26 - - -5.71 3.63 2.15 -0.45 - - - - - -1.69 - 2.39 - - -6.35 -5.93 -6.08 - - - -6.15 - - - - - - - - - - - - -5.51
1.44 2.6 1.8 1.24 -2.99 - - - 3.75 - - - - - -5.39 3.02 2.75 -0.54 - - - - - -1.12 - 1.9 - - - -5.55 - - - - - - - - - - - - - - - - - -
1.56 3.08 2.11 0.9 -1.94 - -4.66 -7.36 2.44 - - -7.57 - - -5.55 3.52 2.51 -0.24 - - - - - -1.03 -5.28 2.52 -6.26 -7.3 -4.62 -5.07 -7.06 -7.69 - - -2.29 - - - - - - - - - - - - -8.13
1.17 2.85 1.45 1.01 -2.1 -5.99 -4.53 -7.09 2.7 - -7.5 - - - -5.36 3.76 2.96 -0.17 - - - - - -1.51 -7.93 2.14 - - - -5.64 - - - - - - - - - -8.04 - - - - - - - -9.87
-0.99 3.31 0.93 0.58 -4.66 - - - 3.81 - - - - - -5.84 3.39 2.43 -0.47 - -3.19 - - - -3.58 - 1.73 - - - -5.72 - - - -6.72 - - - - - - - - - - - - - -
1.59 3.56 0.8 0.84 -4.33 -5.93 -4.05 -5.34 3.48 -7.83 - - - - -5.47 3.11 2.5 -0.7 - -3.7 - - -4.82 -1.67 -6.07 1.54 -6.69 - - -5.18 - - - - - - - - - - -6.86 - - - - -7.95 - -
0.19 3.64 1.96 0.86 -1.16 - -2.95 - 2.53 - - - - - -4.27 3.28 2.47 -0.65 - - - - - -0.41 - 2.49 - - - -5.22 - - - - - - - - - - - - - - - - - -
0.56 2.18 1.53 -0.02 -2.86 - - -2.27 2.37 -2.2 - - - -3.29 -2.7 3.44 1.72 0.52 - - - - - 0.3 - 3.2 - - - -1.48 -2.72 - -1.79 -1.42 - -1.35 -2.38 0.05 - -2.54 - -1.9 - - -3.33 1.16 -1.55 -2.15
1.36 2.5 2.0 1.2 -0.92 -6.72 -6.18 -6.58 2.09 -8.1 -9.19 -6.73 -8.86 -9.54 -5.24 3.72 3.08 0.21 -5.77 -6.38 -8.03 -8.12 - -0.96 -6.14 2.38 -7.09 -11.85 -9.48 -5.7 -10.29 -9.18 -11.92 -9.03 -8.05 -10.34 -11.43 -8.23 - -9.02 - -9.91 -8.98 - -10.27 -7.98 -10.93 -6.53
0.81 3.19 1.62 0.9 -2.51 - - - 2.93 - - - - - -5.0 3.64 2.58 -0.23 - - - - - -1.89 -6.4 2.25 - - - -5.88 - - - - - - - - - - - - - - - - - -
2.05 3.63 1.73 0.64 -4.21 - - - 2.54 - - - - - -3.92 2.92 2.43 -0.77 - - - - - - - 2.83 - - - - - - - - - - - - - - - - - - - - - -
1.37 3.27 1.36 0.78 -3.29 -9.06 -7.55 -6.9 2.98 -11.23 -7.74 -7.89 - - -5.18 3.43 2.37 -0.01 - -9.06 -8.38 -9.41 -10.51 -1.18 -5.83 2.57 -8.0 -10.29 -7.56 -4.66 - -9.65 -12.38 -10.49 -6.24 -9.22 -8.49 -7.81 -8.88 -9.26 -8.97 -10.22 -9.12 -10.83 -10.79 -8.35 - -6.78
0.67 3.68 1.25 0.82 -2.29 -3.75 -2.68 -3.98 2.95 - -5.6 - -6.05 - -4.27 3.35 2.3 -0.64 - -5.47 - - - -2.38 - 2.04 - -1.33 -3.59 -4.35 - - - - - -4.74 -5.04 - -5.06 -4.03 -4.67 -3.1 -3.79 -6.01 -5.97 -5.25 - -4.5
0.61 3.02 1.79 0.49 -1.05 -3.27 -3.12 - 2.03 - - -4.16 - -5.8 -4.97 3.55 2.61 0.84 - - - - -4.4 -0.16 -2.95 2.48 -5.45 -5.72 -2.53 -5.25 - -8.66 - -4.59 0.9 -5.96 -5.25 -4.36 - - - -5.78 - - -4.34 - - -6.55
1.56 3.12 1.78 0.62 -2.65 -7.33 -5.12 -9.48 2.71 - -5.87 -4.16 -7.94 -7.98 -5.58 3.56 2.34 -0.31 - - -9.4 - - -1.2 -4.93 2.38 -7.18 -7.8 -2.94 -5.45 -8.25 -7.72 -3.83 -8.9 -0.72 -2.93 -2.93 -8.47 -8.03 - -6.89 -7.6 - - -8.78 -7.48 - -3.88
1.67 2.9 1.65 0.1 -2.87 - - - 2.56 - - -4.8 - - -4.81 3.85 2.49 0.02 - - - - - -2.25 -4.35 2.2 - - -2.87 -5.53 - - - - -0.17 - - - - - - - - - -4.08 - - -
1.19 2.7 0.33 0.99 -1.18 -1.12 0.51 0.33 2.55 0.47 -5.51 -5.74 0.34 -1.49 -0.34 2.47 2.13 0.02 -0.61 -1.73 -2.35 -3.18 -6.14 0.13 -0.97 2.03 -1.76 -6.63 -5.4 -4.39 -5.04 - -6.05 -7.4 -5.59 -4.28 -4.38 0.47 - -2.46 -0.6 -1.68 -2.08 -4.5 -7.41 0.47 - -6.13
1.03 3.57 1.25 1.36 -1.86 - - - 1.98 - - - - - -5.92 3.73 2.7 0.3 - - - - - -1.12 - 1.78 - - - -7.83 - - - - - - - - - - - - - -4.48 - - - -
-1.39 3.08 1.16 1.04 -3.27 -2.36 -1.86 -1.96 -0.16 -1.83 -3.35 - -2.88 - -3.14 3.53 2.92 1.32 -2.09 -2.78 -3.01 - - 1.54 -2.92 2.24 -3.36 -1.37 - -2.86 -2.51 -3.37 -4.14 -3.39 - -3.14 -3.3 -3.26 - -2.47 - - - -3.5 -2.78 -2.71 -1.0 -2.57
1.19 3.32 2.21 0.74 -2.73 - - -7.68 2.2 - - - - - -5.56 3.54 2.67 -0.06 - - - - - -0.94 - 2.36 -9.29 - - -5.49 - - - - - - - - - - - - - - - - - -9.76
2.11 3.2 2.03 1.4 -2.49 - - -4.55 3.11 - - - - - -4.48 2.79 2.4 -1.54 - - - - - -2.85 - 2.61 - - - -3.58 - - - - -5.13 - - - - - - - - - - - - -
0.69 3.28 1.22 0.79 -5.8 -5.92 -4.64 -3.97 3.35 - - - - - -5.93 2.99 2.6 -0.71 -1.29 1.67 -2.54 - -5.86 -1.38 - 1.78 - - - -5.84 -7.91 - - -7.12 - - - -6.9 - - - - - - - - - -8.59
1.74 2.94 1.92 0.81 -2.07 - -5.65 -1.94 2.42 -4.9 -6.5 - -6.04 -6.32 -4.9 3.06 2.52 0.68 - - - - - -0.09 -6.29 2.85 - -5.2 -5.77 -2.82 -6.41 -2.42 -4.91 -2.46 -2.33 -4.52 -6.35 -2.91 -5.2 -7.04 -3.8 -3.53 -5.4 - -6.44 -2.98 -3.31 -2.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.