Heatmap: Cluster_108 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- 1.35 - -0.25 - - - - - - - - - - - - 0.13 -0.25 3.97 4.58 - -0.26 - - - 1.19 - - - - - - - - - - - - - - - - - - - - - -
-0.05 0.91 1.31 0.19 0.01 0.54 -0.18 0.36 0.29 -0.62 -1.83 -1.57 -1.51 -3.69 -0.47 -1.25 0.49 -0.66 1.58 2.57 1.13 0.76 -0.32 -1.31 -1.41 -3.5 -2.71 0.48 0.49 -0.49 -0.24 -0.53 -0.67 0.19 -0.59 -0.15 -0.36 -1.13 -0.64 -1.22 -4.24 -3.53 -0.37 0.28 -0.37 -1.17 0.22 -0.0
-8.54 - - - -10.64 - -6.23 - - -6.65 -6.74 -8.34 -4.49 -8.52 -3.74 -5.62 0.39 -2.12 1.99 5.21 1.38 -2.29 -8.12 -3.25 -0.09 -7.26 -8.35 -9.38 -6.08 -2.61 -6.85 -3.35 -2.79 -9.88 - -6.8 -4.43 -2.5 -5.2 -3.38 - -7.49 -2.8 -4.73 -2.02 -2.56 -4.37 -7.05
- 0.67 2.66 - 1.55 - - - - - - - - - - - 3.18 0.26 - 4.52 - - - - - 1.96 - - - - - - - - - - - - - - - - - - - - - -
- 0.54 1.64 0.75 -3.43 - - - 0.42 - - - - - - 1.59 2.62 -0.43 1.96 4.52 -0.47 0.76 - - - 0.04 - - - -6.66 - - - - - - - - - - - - - - - - - -4.88
- - -0.31 -1.5 - - - - - - - - - - - 0.94 - -2.41 -23.71 5.2 2.29 0.91 - - - 0.38 - - - - - - - - - - - - - - - - - - - - - -
-1.02 0.2 -0.53 1.88 -1.45 - -2.09 - -4.29 - - - - - -5.41 -1.92 1.13 -0.15 3.03 4.75 -1.61 - -1.17 - -3.44 0.34 - - - -3.88 - - - -1.67 - - - -2.77 - - - - - -3.81 - -3.71 - -
0.72 - 1.2 -0.47 -1.01 1.36 0.14 0.22 1.26 -1.89 - -3.56 - - -2.43 0.82 1.66 1.19 0.18 3.28 -1.37 -0.7 1.67 - 2.36 1.71 -3.67 -2.15 -1.34 -2.28 -3.88 -3.42 -1.64 -3.45 - -1.68 -1.45 -3.21 - -3.5 -1.1 - - - - -0.48 - -0.17
4.13 - 1.43 -1.29 1.34 - - - - - - - - - -5.4 2.88 1.53 0.04 - 3.58 - - - - -2.91 - - - - -3.55 - -1.42 - - - - - - - - -0.89 - - - - - -1.2 -
- - -0.78 - -1.16 - - - - - - - - - - 3.33 3.35 -0.78 - 4.66 - - - - - -0.18 - - - - - - - - - - - - - - - - - - - - - -
- 1.54 -0.07 0.26 0.34 -2.4 - - 1.42 - - - - - -0.72 0.76 1.35 -2.62 -2.19 4.96 - - - - -2.65 0.93 -1.58 - - -7.75 - - - - - - - - - - - - - - - - - -5.23
2.12 2.8 2.39 -0.67 - - - - 0.61 - - - - - - -1.98 1.44 -2.01 2.0 4.04 -1.92 0.54 - -1.53 - 1.79 - - - -5.48 - - - - - - - - - - - - - - - - - -
2.64 0.35 -0.2 -6.96 -0.5 0.97 1.39 0.95 -2.31 -1.5 -10.62 -4.61 -2.54 -3.14 -2.26 2.57 -0.62 -1.98 -0.74 1.81 2.16 -0.71 -0.59 -4.11 0.01 -4.45 -2.4 -2.04 0.12 -0.1 1.42 -2.93 -0.21 -1.24 -3.6 -1.0 0.93 -0.85 -0.8 -2.74 -6.39 -3.34 -1.82 -3.25 -1.33 -0.88 -0.5 0.09
-4.04 -2.06 1.0 -0.48 -4.88 - - - -2.39 -4.71 - - - - -8.01 1.28 1.51 -2.39 2.8 4.65 0.69 1.91 - -3.78 - 0.59 - -3.55 - -6.28 - -4.06 - - - - - - - - -3.53 - - - - - - -5.66
- - - -1.74 - - 2.5 - -1.57 - - - - -1.08 - - - - 3.15 4.91 0.34 - - - - -0.03 - - - -5.43 - - - - - - - - - - - - - - - - - -
- - - - -1.29 - - - - - - - - - - 1.06 1.79 - -0.39 5.3 - -0.48 - - - 0.36 - - - - - - - - - - - - - - - - - - - - - -
1.66 - 3.47 1.13 - - - - - - - - - - - 3.52 1.87 -6.43 1.9 3.03 - - - 1.14 - 1.25 - - - - - - - - - - - - - - - - - - - - - -
- - 3.0 1.81 - - - - - - - - - - - 1.23 2.82 - - 4.55 - - - - - 1.84 - - - -2.55 - - - - - - - - - - - - - - - - - -
- -0.12 -3.22 -2.1 -2.86 - - - -1.97 - - - - - -8.37 -2.9 - - 2.29 5.29 0.16 -2.37 - -3.9 - -0.52 - - - -8.02 - - - - - - - - - - - - - - - - - -
- - 2.81 0.93 2.35 - - - 1.31 - - - - - -2.31 - 1.46 - -0.6 4.56 -7.17 2.08 - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.69 2.08 0.73 -3.3 - - - 0.43 - - - - - -6.21 0.27 3.06 -0.14 - 3.51 -1.46 - - -0.67 - 2.31 - - - - - - - - - - - - - - - - - - - - - -
- - 1.27 - -1.09 - - - - - - - - - - - - -0.04 2.27 5.03 2.39 - - 0.47 - -4.3 - - - - - - - - - - - - - - - - - - - - - -
3.53 - 1.51 -0.16 - - - - 1.39 - - - - - - -0.48 1.21 -2.43 -0.14 4.63 - -2.28 - - - -0.08 - - - - - - - - - - - - - - - - - - - - - -
- - 1.15 - -3.33 - - - - - - - - - - 0.5 0.99 - 3.39 4.84 - - - -0.17 - 1.13 - - - - - - - - - - - - - - - - - - - - - -
-3.15 -1.3 -1.25 -2.22 -3.46 -3.08 -3.6 -3.2 -0.52 -4.32 -2.24 -1.36 -3.92 -4.55 -3.18 -2.53 1.04 -0.46 2.27 4.75 0.94 -0.55 0.78 0.94 -2.77 -2.52 -4.3 -4.41 -3.74 -2.35 -4.57 -5.37 -4.58 -5.02 -6.49 -4.4 -4.52 -2.33 -4.85 -3.26 -0.06 0.13 -2.66 -4.05 -4.25 -2.92 -5.1 -2.72
3.44 -0.72 1.32 0.8 - - - - 0.39 - - - - - - 1.26 -0.97 - 3.24 3.65 -0.38 1.75 - -2.36 - 0.79 - - - - - - - - - - - - - - - - - - - - - -
2.38 - 3.38 0.15 - - - - 0.02 - - - - - - - 2.24 -1.59 2.52 3.71 -0.36 1.56 - - - 0.97 - - - -4.23 - - - - - -1.81 -1.32 - - - - - - - - - - -
- - -2.73 - - -1.38 - - - -2.74 -1.09 -2.3 - - -4.59 - 0.48 0.42 - 4.0 3.43 2.75 -1.11 0.83 0.95 1.73 -0.45 -1.87 -0.84 -4.34 -2.62 - - - -2.35 - - - - - - - - -0.69 - - - -1.91
- - 0.27 - -2.99 -1.41 -4.12 -4.97 - -0.06 0.07 -0.44 0.71 0.26 -0.59 -0.71 0.2 0.87 2.04 3.05 -0.36 -0.62 -2.79 -2.89 -0.59 0.18 -0.48 -0.83 -0.27 -0.2 -0.21 -0.33 -0.65 -0.84 -5.51 -1.93 -0.94 1.0 -1.55 0.37 0.65 1.01 -0.71 0.15 -0.2 1.3 -1.15 0.21
- -0.14 0.15 -2.06 0.52 - - - -1.46 - - - - - - 1.42 0.3 - 3.39 4.67 -0.57 1.76 - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.91 2.51 1.08 -0.21 - - - - - - - - - - 2.09 3.17 - - 4.09 -0.48 0.89 - - - 1.44 - - - - - - - - - - - - - - - - - - - - - -
- - -0.51 - - - - - - - - - - - - 1.06 - - - 5.41 - - - - - 1.46 - - - -4.06 - - - - - - - - - - - - - - - - - -
2.72 - 0.59 -2.62 -4.73 - - - 1.44 - - - - - - 3.11 1.08 -1.57 2.89 3.56 -0.38 2.35 - - - -0.2 - - - - - - - - - - - - - - - - - - - - - -
- - 1.52 - - - - - - - - - - - - - 2.36 - - 5.19 - - - - - 1.81 - - - - - - - - - - - - - - - - - - - - - -
0.48 2.19 1.43 0.73 1.13 -0.87 0.56 - - - - - - - - 3.7 2.84 -2.7 - 3.12 -1.42 - - -2.59 -0.57 1.31 -0.34 - - -6.62 - - - - - - - - - - - - - - - - - -
- - 3.0 - -0.79 - - - - - - - - - - 2.5 3.71 - - 3.83 - - - - - 2.66 - - - -3.21 - - - - - - - - - - - - - - - - - -
- 3.4 2.01 0.71 0.3 - 0.58 - - - - - - - -4.84 1.58 2.24 0.7 2.79 1.77 - 0.41 - - -1.1 2.78 - - - -4.39 - - - - - - - - - - - - - - - - -0.52 -
-1.89 -1.3 -0.45 -2.26 -0.47 0.06 0.78 -1.77 -1.97 -4.79 -4.11 -2.66 -7.68 -7.08 -5.27 0.87 -0.09 -1.04 2.49 4.28 -1.01 -1.83 -3.68 -3.37 2.07 -0.39 2.94 -5.1 -7.78 -5.7 -6.96 -7.39 -8.27 -6.5 -7.54 - -5.96 - - -5.85 -5.86 - -6.94 -5.91 - -6.39 -7.16 -6.11
2.21 1.45 2.48 1.01 -3.09 - - - - - - - - - - 1.41 2.25 -2.87 2.13 3.81 - -1.61 - -0.52 - 2.52 - - - -6.26 - - -4.12 - - - -3.15 - - - - - - - - - - -
1.72 -1.59 0.42 -3.31 -0.26 0.22 -0.58 -0.84 -0.61 0.17 -3.29 -4.56 -1.3 -1.12 -0.46 -0.56 0.59 -0.76 1.77 1.58 1.12 0.24 -1.28 -2.56 -0.66 -0.8 -2.76 0.67 0.08 -0.1 0.78 -0.36 0.14 0.31 0.34 0.76 0.36 0.22 -0.87 -0.13 -1.34 -1.42 -0.21 -0.05 -0.22 0.25 -0.04 -0.3
- -0.3 1.6 -0.38 -1.55 -3.13 -4.0 -4.16 -1.36 -2.62 -5.48 - -3.45 -4.07 -2.89 -0.22 1.11 1.23 2.25 3.14 -0.53 0.45 1.28 0.25 -1.53 -2.32 -0.85 0.97 0.55 -0.49 -0.89 -4.84 -1.27 0.36 1.47 0.87 -0.71 -1.93 0.21 -2.85 -2.4 -2.48 -1.93 -2.23 -1.68 -1.48 -1.75 0.36
- -2.34 1.27 -2.4 -0.64 -1.25 -1.99 -0.99 -1.27 -2.71 - - -2.68 -2.74 -2.72 - 1.35 -0.91 2.86 3.29 0.04 0.21 -1.96 -0.75 -1.84 -6.6 -1.24 1.39 0.1 -0.8 -0.72 -5.95 -0.87 0.37 1.83 1.18 -0.48 -1.11 0.45 -1.92 -2.74 -2.2 -2.05 -1.88 -2.01 -0.78 -1.56 0.08
- 4.24 1.62 2.09 -2.46 - - - - - - - - - -2.75 0.93 2.76 -0.37 - - - - - - -1.75 3.47 -1.65 - - -2.98 - - - - - - - - - - - - - - - - - -3.0
-3.41 - -1.08 -0.35 -0.2 - -1.67 -1.05 - - - - - - -4.48 -2.37 0.66 -2.31 1.08 5.14 2.05 -0.94 - - -3.91 -0.45 - - - -6.59 - - - - - - - - - - - - - - - - - -4.1
- - - 1.07 0.52 - - 2.87 - - - - - - - - - - - 3.76 - - 4.05 - - 2.82 - - - - - - - - - - - - - - - - - - - - - -
2.48 - 2.35 0.57 0.59 - - - - - - - - - - 3.83 3.04 0.59 - 2.36 - - - - - 2.21 -0.8 - - -4.04 - - - - - - - - - - - - - - - - - -
- 0.3 1.13 1.7 0.81 - - - 0.88 - - - - - -4.15 3.29 1.68 - - 4.49 - - - - - 1.13 - - - - - - - - - - - - - - - - - - - - - -
-1.4 -2.24 -2.26 -1.68 -2.1 - -2.55 - 0.59 - - - - - -9.52 -1.6 -0.4 - 2.95 5.11 0.03 -2.11 - -3.85 -4.18 -1.82 -4.46 - - - - - - - - - - - - - - - - - - - - -
- - -8.65 -4.39 -9.03 -7.3 - -6.6 - -0.37 -2.8 -4.1 -1.39 -0.36 -0.64 -1.84 0.29 -0.89 3.38 4.29 0.94 -0.66 - - -3.68 -4.67 -4.67 -3.21 -3.88 -0.48 -0.86 -4.04 -1.45 -2.74 -5.09 -4.45 -2.65 0.38 -3.05 -0.49 0.79 -0.78 -0.73 -1.43 -2.88 0.74 -0.76 -1.65
- - - - - -3.13 -5.64 -4.43 -3.2 -2.53 -4.89 - -4.31 -2.35 -3.52 - 0.87 -0.79 2.89 4.55 1.84 0.19 1.26 -3.73 -2.22 -0.91 -3.87 -3.08 -3.47 -1.63 -1.72 -2.28 -2.72 -2.11 -2.52 -5.9 -3.73 -0.47 -3.22 -0.82 -0.64 -1.16 -2.33 -1.82 -1.26 -0.75 -3.0 -3.02
3.9 - 2.51 -1.68 1.16 - - - - - - - - - - 2.87 2.51 -0.15 -0.3 1.81 - 0.45 - -0.5 - 2.18 - - - -4.81 - - - - - - - - - - - - - - - - - -
- - 0.38 -0.94 -3.76 - - - -0.83 - - - - - - 0.55 -0.15 -8.64 0.63 5.26 -0.08 0.73 - -5.95 - -0.83 - -6.13 - -6.54 - - - - - - - - - - - - - - - - - -
- - 3.36 1.18 - - - - - - - - - - - - - - - 5.15 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -1.54 - - - - - - - - - - - - - 2.77 2.43 1.04 4.61 0.32 0.51 - -1.11 0.65 1.91 -1.28 - - - - - - - - - - - - - - - - - - - - -
- - 1.24 - - - - - - - - - - - -1.12 - - - - 5.5 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.05 1.31 1.16 - - - - - - - - - - -4.31 - 2.65 1.75 -0.02 -1.01 - 0.86 - 0.85 - 3.56 - - - -3.32 - - - - - - - - - - - - - - - - - -
- -0.78 -0.43 0.76 0.82 1.4 -0.31 -0.81 - -1.58 1.34 1.04 -1.87 - -0.42 - 0.41 -0.94 0.3 4.0 2.22 -0.84 - - -1.02 -0.71 0.16 -0.74 -3.55 -1.14 -1.82 1.13 - - - - -2.51 -1.19 - - - -1.84 - 0.11 - - -1.29 -0.46
- -0.28 2.81 0.14 -1.79 - - - 0.13 - - - - - - 0.8 0.7 -0.36 3.82 3.83 1.11 -4.59 - -2.7 - 1.49 - - - -6.18 - - - - - - - - - - - - - - - - - -
1.68 -1.18 1.38 -0.02 -2.63 - - - - - - - - - - -1.04 0.66 -0.7 2.65 4.55 0.24 1.81 - - - 1.79 - - - - - - - - - - - - - - - - - - - - - -
- - 2.43 0.48 - - - - - - - - - - - 2.3 3.94 -6.1 - 4.03 -0.35 - - - - 1.93 - - - - - - - - - - - - - - - - - - - - - -
1.29 - 2.3 1.14 - - - - - - - - - - - - 2.78 - - 4.28 - - - - - 3.11 - 1.83 - - - - - - - - - - - - - - - - - - - -
- - 2.91 - - - - - - - - - - - - - - - - 5.34 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.45 2.21 1.93 -0.68 -3.8 - - - 0.4 - - - - - -7.91 2.56 2.31 -1.31 1.35 3.06 2.08 0.63 - -1.82 - 1.95 - - - - - - - - - - - - - - - - - - - - - -
4.13 - 1.43 -1.29 1.34 - - - - - - - - - -5.4 2.88 1.53 0.04 - 3.58 - - - - -2.91 - - - - -3.55 - -1.42 - - - - - - - - -0.89 - - - - - -1.2 -
- - - - - - - - - 0.08 - - - - 1.17 - 0.11 - - 3.97 - - - - - - -0.25 - - -1.93 2.32 1.75 1.61 -9.08 - - - 2.24 1.01 1.21 - - - 0.95 -0.43 - 1.53 -0.3
-0.9 1.33 0.28 0.17 -0.68 - - - - - - - - - -5.8 1.48 0.49 -1.03 2.48 4.94 -2.82 - - - - -0.23 - - - -5.73 - - - - - - - - - - - - - - - - - -
- 4.1 2.36 1.21 - - - - - - - - - - -2.62 - 3.69 - - - - - - - - 3.37 - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.