Heatmap: Cluster_90 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
3.4 1.1 0.44 -3.93 -1.5 0.83 -0.07 -0.68 0.2 -1.15 -2.66 -3.27 -1.7 -4.59 -1.62 0.55 -1.42 -0.01 1.0 -0.65 -1.01 0.43 -1.43 -1.89 -1.78 -1.68 -2.3 0.2 1.32 -0.18 0.01 -1.99 -0.1 1.11 -0.75 0.59 0.4 -0.63 -0.79 -1.17 -2.98 -3.3 -1.15 -0.24 -0.32 -0.35 -0.59 0.2
3.36 1.88 -5.27 - -1.13 -0.16 -0.11 0.23 - 0.06 -3.76 - -0.85 0.48 -1.54 2.89 -1.7 -2.65 -1.23 -1.89 -4.96 -1.04 -0.77 1.45 -3.51 -1.09 -4.08 -3.41 -5.22 -2.0 -4.53 -4.83 -4.23 -4.85 -3.51 - -4.11 1.23 -2.13 0.28 1.35 1.79 -1.87 -1.16 -2.65 1.17 -2.53 -1.48
5.44 - -2.39 - - - - - 0.09 - - - - - - - -0.8 - - - - - - 0.04 - 0.79 - - - -3.87 - - - - - - - - - - - - - - - - - -
5.03 - 0.34 - -0.54 - - - - - - - - - - - 3.14 0.6 - - - - - - - 1.66 - - - - - - - - - - - - - - - - - - - - - -
5.36 - -1.71 -1.45 - - - - 2.09 - - - - - - - -0.12 - - - - - - - - -0.11 - - - - - - - - - - - - - - - - - - - - - -
4.16 1.13 -1.23 - -1.63 1.34 1.2 2.37 2.42 0.89 -0.51 0.67 - - -1.97 1.08 1.3 - - - - -0.13 - - - -0.63 - - - - - - - - - - - - - - - - - - - 0.35 - -
4.2 -0.09 -1.97 -1.17 -2.52 -0.08 -4.64 -0.59 0.86 -0.78 0.39 0.97 -0.73 -1.59 -0.63 2.82 0.3 -1.46 -2.73 -0.99 -4.64 -2.19 -0.35 -1.71 0.12 0.13 0.13 - 0.15 -1.68 -2.86 -2.71 -4.47 -2.72 -1.35 -2.45 - -1.37 -4.31 -1.93 -1.41 -2.11 -2.5 -2.71 -3.76 -2.86 -4.78 -0.72
5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
5.13 - - - -1.37 - - - 1.83 - - - - - - 1.89 2.4 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.9 - 0.01 1.42 -2.96 0.09 0.1 2.18 -1.41 -3.65 0.19 -0.35 - - -3.5 1.68 1.46 1.97 -1.64 0.19 -0.28 -0.66 0.97 -0.45 -1.44 0.72 -1.93 -2.35 -2.94 -2.47 - -4.07 -3.59 -3.54 - -3.91 -2.62 -3.89 - -2.19 -2.39 -1.56 -3.9 -2.65 -3.33 -3.89 -3.7 -4.11
4.61 1.42 -4.1 -0.86 -4.24 0.22 0.46 - -0.46 -2.22 -1.07 1.17 - - -1.65 -1.8 -0.57 0.35 -1.26 - - -1.18 - 3.01 -0.57 -1.46 -2.24 -2.97 -3.56 -0.84 - - - - - - -3.24 -3.51 - -3.0 - -3.18 - - - - - -3.73
4.99 - 0.5 - - - - - 2.04 - - - - - - 3.39 - - - - - - - - - - - - - -2.98 - - - - - - - - - - - - - - - - - -
3.95 3.2 0.51 -1.79 -1.16 - - -3.34 1.71 -3.68 - -4.14 -2.88 - -2.64 3.46 0.82 -0.58 - - - - - -4.23 -4.51 -0.02 -4.63 -2.98 -4.04 -2.49 -3.95 -3.39 -4.97 -3.46 -5.02 -2.41 - -2.19 -2.55 -0.39 -3.75 -3.64 -2.9 -3.36 -3.14 -2.06 - -2.64
4.87 3.73 - -0.29 - - - - 0.36 - - - - - - - 0.15 1.14 - - - - - - - - - - - -2.62 - - - - - - - - - - - - - - - - - -
4.8 - 1.97 - - - - - 3.34 - - - - - - 1.64 - - - - - - - 1.59 - - - - - - - - - - - - - - - - - - - - - - - -
4.92 - 0.89 - -0.48 - - - 1.76 - - - - - - 0.19 0.2 -2.36 - 2.54 - - - - - 1.72 - - - -3.6 - - - - - - - - - - - - - - - - - -3.53
4.19 2.63 -3.34 - - - - - - -1.18 -2.74 0.32 -3.19 -2.59 -4.43 - -2.77 -1.86 - - - - - -2.75 - -1.14 -2.7 - -2.11 -0.57 0.57 -1.41 -2.29 -2.01 - - -0.72 2.65 - 0.48 -1.37 0.69 -0.73 -1.64 -1.94 2.16 -0.68 -1.38
5.1 2.71 - - - - - - - - - - - - - - 2.82 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
4.94 -3.66 - -1.15 -3.24 - -1.27 - 3.07 - - - - - -7.85 2.52 0.04 - - - - - - - - -0.0 - - - -5.02 - - - - - - - - - - - - - - - - - -
4.79 - -1.05 -1.21 0.55 0.84 0.76 1.01 - 1.19 - - 0.79 -1.08 -1.9 - -0.03 -0.13 -1.21 - - - - - - 1.56 - - -2.88 -5.58 -0.69 - - - - - - -2.46 - - -1.96 -2.11 -0.88 -2.75 - -2.49 - -2.96
3.21 4.08 - - 1.14 - 2.38 2.49 - - - - - - - - 2.13 - - - - - - - - 2.14 - - - - - - - - - - - - - - - - - - - - - -
4.46 1.31 2.73 - - -0.47 - -1.93 0.88 - - - -2.69 - -1.78 -1.39 1.85 -0.84 - -1.78 -0.2 - 0.08 -0.61 0.08 0.88 -2.64 - - -4.15 - - -4.24 -2.61 - -1.28 -1.22 -2.38 - -1.5 -1.86 - - - -1.44 - -2.18 -0.62
5.07 2.68 -1.33 - - - - - 1.84 - - - - - -6.84 1.11 -2.77 -1.36 - -2.21 - - - - - -0.12 - - - - - - - - - - - -2.78 - - - - - - - - - -
5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.6 0.99 1.06 -0.9 -1.14 -0.67 1.21 1.45 3.08 -0.56 - -3.13 -2.76 -2.73 -2.38 0.72 0.56 0.99 -2.2 -3.99 - -2.13 - - -1.97 2.12 -1.46 - - -2.33 -0.84 -4.73 - - - - - -1.92 - -1.18 -0.05 -0.82 -0.65 -4.84 - -2.64 -0.1 -5.75
4.67 - 0.99 - - - - - - - - - - - - - 2.75 - - - - - - - - 3.8 - - - - - - - - - - - - - - - - - - - - - -
4.2 3.29 1.58 -1.79 -3.67 -0.38 -2.42 - 1.39 -2.63 - -1.9 - - -7.76 1.89 1.06 -0.26 - - - - - -1.47 - 1.11 - - - -2.04 -3.65 -1.1 -3.43 - - - - -2.1 - -1.02 -3.13 -1.82 -1.2 - -3.88 - -0.8 -2.06
2.31 3.17 -0.49 -3.51 -2.86 0.1 2.67 -0.31 - 0.51 - - -1.43 -0.91 -0.63 - 2.29 1.35 -2.1 -1.21 -1.91 -0.01 - -0.58 -1.39 -0.17 -2.1 -2.11 -3.77 -0.97 -0.81 -0.26 -1.15 -1.73 -1.4 -2.79 -0.62 -0.17 -2.69 -1.12 -1.27 -3.19 -0.91 -1.53 -2.42 1.16 -0.66 -1.94
3.7 1.92 2.18 1.18 -1.24 -0.35 -0.99 -2.79 - -1.44 -3.19 - -1.19 -1.3 -1.18 0.59 0.91 2.05 -0.19 1.14 1.45 1.48 0.2 -0.17 -2.9 0.16 -2.88 -4.71 - -4.12 -5.12 -4.27 -5.17 -3.67 -3.69 -3.45 -3.98 -3.4 -2.03 -4.37 - -3.9 -5.25 -5.53 - - - -2.19
5.12 - - -0.9 - - - - 2.87 -1.24 - - - - - - 2.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.93 1.01 1.59 0.62 -3.1 -0.06 -1.46 -1.4 - 0.0 -0.32 -0.42 0.14 0.27 -1.01 1.09 0.39 1.55 -0.96 -0.29 -0.94 -0.61 -3.48 -0.07 -0.02 1.08 -0.91 - -2.25 -2.41 -2.49 -4.12 -2.92 -3.86 - -5.04 - -0.2 -3.21 -4.15 -0.1 -0.32 -2.43 -2.55 -2.87 -0.38 -3.04 -1.09
4.14 4.38 0.06 - - - - - - - - - - - - - 1.32 -1.52 - - - - - 2.49 - - - - - -3.81 - - - - - - - - - - - - - - - - - -
4.33 - -1.07 -3.95 1.27 -1.38 1.66 - - -2.98 -3.66 -3.13 - -2.58 -2.07 2.2 -2.14 0.93 2.1 -0.83 0.21 - - -2.22 -2.8 -0.04 -2.62 - -2.38 -2.45 -1.29 -1.89 -3.34 -3.02 - -3.23 - -1.02 -3.13 -1.88 - -3.63 0.52 -0.73 -0.83 0.07 -1.1 -
5.09 0.04 0.31 -0.84 -4.52 0.58 0.38 0.71 -0.82 -4.38 -1.18 -3.71 -2.28 -2.96 -3.39 - -1.29 -2.26 - -2.4 - - - -1.75 -3.34 -0.17 -1.73 -2.01 - -2.0 -3.42 - -3.61 -3.2 -1.61 -1.39 -3.28 - -2.6 -2.67 -3.05 -2.29 - - - - -2.35 -2.66
4.4 2.43 -1.01 -1.03 - - - - 2.6 -1.5 -2.7 - - - -6.68 2.83 0.35 -2.69 - - - - - - - 2.12 - - - -3.99 - - - - - - - -2.7 - -2.19 - -1.44 - - - - -2.5 -
5.34 - 1.12 -0.62 - 0.41 - -0.0 - - - - - - - - 0.45 -0.17 - - - - - - - - - - - -3.87 - - - - - - - - - - - - - - - - - -
4.63 - - 1.25 - - - - - - - - - - - 2.46 2.69 1.52 - -0.68 - - - - - 2.42 - - - - - - - - - - - - - - - - - - - - - -
4.67 1.32 1.71 1.21 - - - - - - - - - - -2.45 - 1.41 2.17 -0.78 - - - 2.59 - - - - - - -0.82 - - - - - - - - - - - - - - - - - -
4.82 3.48 1.81 - - - - - 0.63 - - - - - - - - - - - - - - - - - - - - -0.86 0.0 - - - - - - - - - - - - - - - 0.94 -
5.29 - - -0.13 - - - - - - - - - - - 1.03 1.89 -1.03 - - - - - -1.06 - 0.41 - - - - - - - - - - - - - - - - - - - - - -
4.79 3.01 0.35 -1.63 -4.68 0.29 - -0.78 - -1.62 -1.93 -1.33 -3.21 -5.86 -2.11 1.02 -0.64 -1.94 - -2.77 -6.73 - - -3.44 -2.7 -0.89 -1.46 - -1.92 -3.45 -2.06 - - -6.21 - -1.43 -2.65 -2.6 -2.02 -1.47 -1.4 - -1.35 -3.08 -3.13 -2.43 -3.08 -3.46
5.01 2.8 1.2 -1.14 - - - - - - - - - - -4.99 0.14 1.7 -3.16 - - - - - - - 0.76 - - - - - - - - - - - - - - - - - - - - - -
5.4 - - - 2.25 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.22 - - - - - -
4.89 -1.1 0.6 - - - - - 3.08 - - - - - - -0.56 1.79 -1.86 - - - - - - - 1.79 - - - -3.34 - - - - - - - - - - - - - - - - - -
5.06 2.48 1.48 1.63 - - - - - - - - - - - - - 1.07 - - - - - - - 0.08 - - - - - - - - - - - - - - - - - - - - - -
5.13 - - -0.44 - - - - 1.1 - - - - - - 0.02 2.58 - - - - - - -1.12 - 1.37 - - - -5.1 - - - - - - - - - - - - - - - - - -
5.33 - -2.47 -3.62 -4.43 0.71 0.01 -0.03 - -2.65 - - -1.25 -3.18 -2.38 -2.75 -0.0 - - - - -3.34 - -3.21 - -0.64 - - - -6.55 -1.41 - - - - -3.48 - -3.27 - -2.95 - - -3.47 - - -3.49 - -
3.26 0.59 -0.0 0.29 1.4 0.34 1.16 1.35 1.29 -2.02 - -1.57 -0.94 - -1.28 2.8 -0.36 -1.26 - 0.0 0.03 - - -0.29 -0.47 -0.36 1.04 - 0.65 -0.09 0.14 - -3.28 - -1.59 - - -0.88 - -1.51 - -1.09 - 0.21 - -1.41 - -0.91
4.61 - 2.15 0.95 -0.77 1.13 -0.4 1.21 - -2.57 - - -2.06 - -4.79 1.7 0.31 -2.32 - -1.18 - - - 0.32 -0.49 -1.65 - - - - - - -3.61 - -1.95 -1.75 - -1.55 - -1.23 -0.69 - - - -0.28 -1.77 -1.54 -
5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
5.28 - - - - - - - 2.68 - - - - - - - 0.85 - - - - - - - - -0.06 - - - -5.14 - - - - - - - - - - - - - - - - - -
4.95 - - -2.72 - - - -2.12 0.58 -1.99 -3.35 - - - -5.95 3.58 -2.48 - - - -3.05 -2.35 - - -3.19 0.62 -3.31 - - -4.91 -4.5 -3.66 - - - - - -3.3 - - -2.98 - - - - - -2.29 -
4.76 3.22 - -0.42 -2.98 - - - 1.38 - - - - - -7.95 0.89 1.3 - - - - - - - - 1.89 - - - - - - - - - - - - - - - - - - - - - -
4.87 2.65 0.88 - -4.66 - - -2.22 - - -1.25 -3.84 - - -2.94 1.68 0.13 -0.21 - -3.42 -2.34 -3.55 - -1.18 -2.73 -0.32 - -2.14 -1.9 -3.62 -2.63 -2.7 -4.56 -2.26 -2.38 -3.11 -1.73 -1.38 -2.0 -3.17 - - -3.68 - -2.33 - -3.48 -3.67
4.39 3.22 - - 3.41 - - - - - - - - - - - - - - - - - - - - 2.82 - - - - - - - - - - - - - - - - - - - - - -
3.29 3.26 0.23 1.43 0.44 -0.23 -0.63 -4.2 - -4.43 -2.91 -3.9 - - -4.94 - 0.09 1.62 0.3 0.5 0.82 1.47 1.05 0.93 1.77 0.72 -0.5 - - -5.63 - - - - - -4.58 - - - - - -1.26 -4.07 - - - - -
3.76 3.06 1.34 0.96 -4.3 - - - 3.03 - - - - - -4.95 2.8 2.01 -2.76 - - - - - - - 1.2 - - - - - - - - - - - - - - - - - - - - - -
5.37 1.77 - - - - - - - - - - - - - - - - - - - - - - - 1.67 - - - - - - - - - - - - - - - - - - - - - -
4.15 4.34 -3.74 -1.21 - - - - 1.83 - - - - - - -2.44 1.33 - - - - - - -1.57 - 1.56 - - - -6.22 - - - - - - - - - - - - - - - - - -
4.32 2.27 1.05 -0.63 -3.59 - - - 2.94 - - - - - -5.3 1.88 1.46 - - - - - - -2.3 - 2.53 - - - -5.07 - - - - - - - -2.36 - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.