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Heatmap: Cluster_111 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

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Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
2.17 0.13 0.78 0.74 0.01 1.75 0.0 0.0 0.0 0.31 2.89 21.36 4.92 2.52 3.71 4.71 2.16 7.42 0.06
23.05 26.09 13.62 15.23 20.82 26.67 15.01 19.68 14.97 14.69 21.27 54.49 28.79 21.38 24.37 29.75 26.37 30.18 23.38
0.0 2.71 1.06 0.67 0.0 1.54 0.0 0.63 0.49 0.0 1.81 5.49 5.98 1.84 1.32 5.1 3.12 4.51 1.52
0.55 0.17 0.0 0.0 0.75 0.56 0.71 0.63 1.41 2.43 0.97 9.76 5.35 1.21 2.29 1.04 1.43 4.52 0.96
0.0 0.0 0.2 0.0 0.02 0.09 0.05 0.07 0.05 0.15 0.12 0.47 0.11 0.05 0.1 0.06 0.03 0.28 0.11
0.45 0.4 0.74 0.01 0.25 0.1 0.73 0.21 0.44 0.3 2.75 7.59 4.69 2.2 2.71 3.39 2.7 2.24 3.15
3.83 2.14 5.26 1.22 1.44 2.89 1.49 2.19 3.18 1.32 6.27 9.19 9.25 5.04 4.47 9.58 8.37 9.44 4.61
1.45 1.94 0.15 0.25 1.14 1.35 1.29 1.71 1.93 1.69 4.22 13.11 6.0 4.28 3.67 6.41 6.39 5.11 4.86
7.03 7.56 7.15 6.1 7.52 8.29 5.45 9.37 6.65 5.28 6.13 18.71 13.16 5.74 7.19 9.89 8.92 11.96 8.6
0.05 0.92 1.4 2.12 0.25 0.59 0.25 0.0 0.41 0.0 0.38 5.16 1.58 1.26 2.09 2.17 1.74 3.33 1.1
10.02 10.85 8.43 11.0 13.18 12.73 12.74 12.3 14.25 15.25 14.34 14.42 12.61 13.88 16.56 19.61 16.11 21.17 12.78
8.12 8.59 7.64 8.65 10.29 11.96 10.05 9.69 11.11 11.02 11.24 16.1 12.4 9.48 11.74 13.22 12.66 12.85 9.89
0.48 0.0 0.13 0.0 0.08 0.32 0.0 0.0 0.0 0.0 1.58 1.45 5.73 0.48 1.81 4.91 2.5 6.76 0.47
0.58 0.47 0.55 0.94 0.45 1.04 0.68 0.32 0.21 0.68 1.01 2.73 1.28 1.05 1.56 1.31 1.16 2.47 0.73
8.64 7.87 10.12 8.12 8.09 11.03 7.22 10.46 7.09 5.54 9.11 25.12 11.95 11.72 12.89 16.06 12.68 16.45 6.63
0.36 1.1 2.1 0.88 0.41 1.13 0.0 0.81 0.49 1.91 0.88 5.8 2.14 1.36 1.23 1.46 1.56 3.32 0.69
0.29 0.33 0.8 0.41 0.27 0.0 0.49 1.24 0.08 0.08 2.05 5.04 2.65 1.35 2.1 2.98 1.79 3.04 1.1
0.29 0.33 0.8 0.41 0.27 0.0 0.49 1.24 0.08 0.08 2.05 5.04 2.65 1.35 2.1 2.98 1.79 3.04 1.1
6.75 3.55 1.73 1.93 3.94 7.8 3.66 0.37 6.54 0.0 4.26 18.19 10.9 5.32 7.4 8.86 5.81 9.88 7.06
0.41 2.56 0.19 0.0 1.64 4.2 2.05 5.74 2.6 2.66 4.25 2.65 0.43 4.21 3.46 7.94 6.17 6.23 3.18
0.0 0.26 0.0 0.09 0.19 0.12 0.12 0.0 0.0 0.11 0.24 2.22 2.15 0.26 1.82 1.6 0.72 4.4 1.67
11.69 16.98 10.82 18.59 25.27 19.87 13.67 3.31 9.93 10.18 14.72 28.18 19.11 11.14 12.76 23.28 26.95 14.1 9.03
0.0 0.07 0.0 0.09 0.12 0.0 0.07 0.14 0.2 0.0 0.26 1.55 1.26 0.1 0.1 0.76 0.13 1.46 0.7
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 12.28 8.1 0.0 0.61 0.62 0.26 5.15 1.42
6.69 7.63 3.7 4.04 6.76 8.5 6.45 8.4 6.99 8.14 6.62 6.13 6.57 7.77 9.22 13.17 10.62 13.01 6.87
0.43 0.78 0.5 0.56 0.22 0.0 1.07 0.69 0.0 0.46 1.89 5.83 6.27 2.64 2.84 4.34 2.49 2.69 0.64
7.19 15.0 2.76 2.67 10.93 13.58 3.45 2.18 5.85 4.88 10.3 19.95 14.39 11.24 7.61 17.61 18.99 10.46 12.1
1.4 0.0 0.0 0.03 0.0 0.0 0.41 0.0 1.86 0.35 0.0 26.08 6.45 10.11 1.01 9.4 0.71 16.57 0.0
0.12 0.0 0.0 0.36 0.69 0.25 0.36 0.7 0.72 0.0 0.63 8.54 4.31 0.78 1.54 1.58 0.77 1.74 0.5
0.0 0.0 0.0 0.26 0.69 0.57 0.45 0.3 0.24 0.5 1.03 7.59 4.96 1.32 2.89 2.6 1.72 3.24 1.35
0.33 0.1 0.32 0.55 0.5 0.81 0.57 0.07 1.04 1.02 1.39 0.07 2.1 0.72 0.81 3.32 2.02 2.94 0.84
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.81 5.06 1.58 1.5 0.87 1.8 2.81 0.17 2.4
1.91 0.44 0.85 1.0 0.63 0.0 2.1 6.61 0.37 2.36 4.3 20.11 12.17 1.37 9.23 9.93 7.99 6.9 0.49
2.58 3.71 0.77 1.75 1.29 3.02 0.43 0.7 0.33 2.22 2.4 7.39 3.46 2.33 2.43 4.61 4.53 3.2 3.68
0.17 0.29 0.32 0.27 0.53 0.0 0.0 0.79 0.18 0.0 1.93 4.52 2.82 2.3 1.4 2.26 2.16 1.89 4.36
0.0 0.14 0.0 0.1 0.0 0.0 0.1 0.0 0.0 0.0 0.0 2.77 1.08 0.08 0.0 0.06 0.09 0.16 0.09
0.0 0.05 0.0 0.16 0.07 0.0 0.06 0.0 0.01 0.0 0.01 1.55 0.55 0.2 0.34 0.5 0.45 1.67 0.19
2.67 2.19 1.48 2.55 2.28 3.04 2.47 0.25 1.46 0.3 4.77 20.43 8.02 5.11 6.69 5.98 5.56 7.35 7.96
0.09 0.0 0.14 0.0 0.0 0.0 0.14 0.15 0.0 0.0 1.55 7.79 2.7 1.56 0.19 1.96 1.39 4.2 1.5
0.09 0.0 0.14 0.0 0.0 0.0 0.14 0.15 0.0 0.0 1.55 7.79 2.7 1.56 0.19 1.96 1.39 4.2 1.5
14.97 11.53 9.16 6.58 11.26 15.78 7.53 13.04 10.54 16.1 14.3 35.01 16.1 14.57 18.68 25.57 20.44 21.25 11.48
0.0 0.25 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.41 2.59 0.12 0.05 1.73 0.03 2.08 0.0
0.11 0.2 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.01 0.27 3.48 1.64 0.24 0.6 0.36 0.23 1.52 0.57
0.03 0.08 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.09 1.11 0.57 0.14 0.22 0.12 0.12 0.54 0.2
0.03 0.08 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.09 1.11 0.57 0.14 0.22 0.12 0.12 0.54 0.2
0.0 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.78 0.48 0.0 0.0 0.0 0.0 0.54 0.2
0.0 0.0 0.22 0.0 0.0 0.15 0.44 0.05 0.27 1.04 0.65 0.07 0.67 0.63 0.68 1.22 0.76 1.78 0.42
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.76 0.28 0.0 0.0 0.78 0.0 1.17 0.53
0.55 0.95 0.43 0.28 0.54 1.37 0.28 1.07 0.48 0.56 1.84 0.98 4.55 1.48 2.1 4.78 2.93 4.98 0.6
1.46 0.0 0.1 0.5 0.14 0.3 3.91 2.13 3.2 0.69 0.27 7.51 4.72 4.64 3.12 5.84 0.27 16.6 0.26
0.11 0.0 0.0 0.2 1.02 0.64 0.2 0.0 0.1 0.0 0.47 4.94 2.27 0.02 0.0 0.17 0.0 1.48 1.3
3.35 2.57 1.38 1.59 3.26 3.83 3.26 0.74 2.81 0.32 5.63 11.59 10.16 4.68 6.64 7.7 7.16 5.99 6.09
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.43 0.0 0.0 0.0 1.63 0.0 0.0 0.0
0.0 0.0 0.0 0.07 0.0 0.0 0.14 0.1 0.0 0.0 0.47 4.2 4.61 0.25 0.0 3.8 0.74 4.24 0.0
0.71 0.0 3.71 1.47 1.04 0.0 1.77 0.0 0.41 0.0 0.89 9.69 0.13 1.29 3.43 5.96 0.32 6.8 0.78
0.34 0.63 0.12 1.35 0.76 0.58 0.4 0.73 0.84 0.53 0.67 12.32 8.35 1.84 2.23 3.72 2.87 7.23 1.33
0.71 0.24 0.84 1.24 0.26 1.53 0.0 0.16 0.0 0.16 0.19 7.61 3.28 0.52 1.58 0.91 0.87 2.63 0.32
0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.56 0.74 2.91 3.78 0.41 1.54 3.26 3.21 4.72 2.08
17.06 10.37 11.03 17.59 26.19 22.76 14.4 7.91 16.01 22.96 12.85 27.94 21.02 14.61 16.96 20.72 19.53 20.12 14.81

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)