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Heatmap: Cluster_105 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
2.39 1.38 -3.4 -0.94 - - -1.38 -0.22 -1.81 - 0.12 1.08 -2.75 1.19 -1.49 -0.18 0.43 -1.39 -1.34
0.99 1.34 -1.34 0.59 -2.46 0.79 - 1.46 -2.95 -1.98 -1.34 -0.37 -3.86 -0.13 0.21 -0.22 0.52 0.54 -1.05
0.23 1.42 0.64 -0.1 0.19 1.16 -2.2 -3.22 0.9 0.28 -2.69 0.92 -0.96 -2.21 -0.71 -0.11 -0.58 -0.81 -1.56
0.05 0.91 -0.27 -1.97 0.05 1.63 -0.2 0.63 0.24 0.98 -6.39 -0.14 -0.22 -2.24 -3.19 0.3 -0.52 0.3 -4.03
1.25 2.53 -1.31 -0.71 1.17 0.2 -3.51 -0.43 - -2.43 - - 1.4 -2.58 -4.02 - -3.25 -0.9 0.94
-1.6 1.82 -0.71 0.62 - 0.65 -14.32 -1.13 - -30.39 -0.34 - 0.96 -0.07 -0.15 0.71 1.49 0.43 -0.8
2.19 1.89 - 1.31 1.18 1.13 - 1.15 - - -2.01 - - -1.29 - -1.69 - -1.69 -1.79
2.12 2.54 -0.31 0.31 1.13 0.89 - - -0.87 - - - - -1.01 - -2.54 -1.86 0.31 -
0.34 1.26 -2.27 1.34 0.86 1.64 1.26 0.45 -0.78 -0.4 -2.47 - -4.31 -1.07 -1.33 -2.05 -1.95 -0.21 -3.15
- 2.93 2.89 - - - - - 0.98 - - - -2.24 -0.02 -0.77 - -2.03 - -
1.31 0.13 0.6 - 0.21 - -1.75 -0.84 0.35 0.49 -0.77 -1.62 1.37 -0.85 0.47 -0.95 -0.12 -2.32 1.1
-31.09 1.56 1.09 1.73 -31.12 -2.59 -1.53 1.65 -2.01 -0.4 -2.18 - 1.93 -0.53 -1.51 -1.06 -1.82 -2.78 -
- - - -5.72 - - -1.67 -1.1 - -1.47 0.98 -2.13 2.13 0.21 1.65 0.5 -1.51 2.12 -0.2
1.16 1.75 -0.87 -0.44 0.45 -9.79 -0.53 -1.25 - 0.02 - - 1.84 -1.43 - -0.67 1.14 0.81 -3.81
2.81 1.15 - 1.21 0.98 0.9 0.56 0.35 - -0.57 - - -2.2 - -30.0 - - - -
1.91 0.6 0.05 0.78 1.18 1.53 1.32 0.54 0.14 -2.32 - - -1.25 -4.89 - -4.25 - - -4.16
0.05 1.38 -1.89 -2.62 - -0.89 0.64 -0.83 -0.39 -1.74 0.43 -1.75 1.1 0.29 1.01 -0.48 -0.46 0.49 0.41
0.59 0.75 -0.51 -0.64 0.42 0.43 0.41 -1.17 0.18 -3.05 0.13 -1.69 0.74 -0.1 0.27 -0.56 -0.3 -0.05 0.11
-3.46 0.39 - -1.7 0.94 0.42 0.62 -0.58 0.34 -1.58 -0.43 -31.98 0.19 0.0 0.02 0.98 0.31 0.81 0.45
- 1.86 2.02 -1.16 -0.17 1.53 - - 0.12 0.06 -0.75 - -3.29 -1.34 0.09 0.11 0.14 -0.93 -3.1
-0.1 0.03 - 3.33 2.05 - - - -1.5 - - -26.37 - -0.87 -2.04 0.06 - -1.27 -1.9
1.6 2.0 -0.63 0.84 1.57 1.63 -0.84 -3.49 -0.23 -1.7 -2.7 - -3.84 -2.06 -2.5 -1.74 -2.26 -1.37 -2.95
1.27 0.33 -0.88 0.36 0.96 1.35 -0.25 -1.68 -0.35 -2.59 -0.3 -2.42 -0.17 -1.25 0.24 0.19 0.09 -0.45 -1.1
-0.56 0.12 0.41 -2.17 0.93 0.48 -0.93 -2.69 -0.39 0.52 -1.12 -2.23 0.71 -0.67 0.06 0.37 -0.27 0.35 1.09
3.06 0.85 0.34 -0.18 0.46 0.46 -1.04 -2.17 -1.72 - -0.83 - -0.71 -1.73 -2.17 -1.07 -1.88 -1.43 -3.14
1.02 2.5 0.31 0.45 1.3 1.19 -1.19 -0.9 -1.56 -0.48 -4.2 -1.38 - -2.82 -2.49 -1.37 -2.19 -0.99 -3.67
1.99 2.8 - 1.04 -0.65 1.25 - - -0.24 0.83 - - - -1.59 - - - - -
1.64 1.07 -1.78 -0.19 0.97 1.12 -1.27 -0.6 0.05 -1.23 -1.67 - 0.67 -0.82 0.5 -0.11 -1.73 -1.16 -1.37
0.91 1.36 0.3 0.89 1.17 1.38 -2.03 -1.12 -0.2 -0.63 -3.68 0.96 -3.25 -2.99 -1.96 -0.99 -2.13 0.11 -3.54
3.43 2.11 - -0.04 0.41 - - - - - - - - -0.9 - - - - 0.15
2.48 1.81 0.94 0.48 1.27 - - - -0.73 0.86 - - - -2.12 -0.86 - - -0.03 -
-0.84 0.82 -0.55 -0.67 0.11 -0.3 -0.09 -0.26 0.27 -1.03 -0.05 -1.81 0.38 -0.1 0.38 0.15 0.55 0.61 0.16
- 2.5 1.08 - - 2.94 - - - 1.83 - - - - - - - - -
- -1.49 0.14 0.31 1.27 1.59 -3.14 -3.44 -0.26 -2.14 -0.15 -2.75 1.67 -0.0 0.08 0.46 -0.54 0.04 -2.22
1.38 1.52 - 0.87 1.22 1.04 -0.77 0.03 -1.97 -0.58 -1.4 -1.83 -1.65 -0.98 -0.79 -0.96 -0.8 -1.03 0.2
- 1.41 1.43 3.07 2.06 0.1 - - - - - - - - - - - - -
3.61 - - -19.01 - - - - - 2.76 - - - - - - - - -
- 2.65 2.02 0.03 - - - - - - - -1.31 - -0.5 -1.0 -0.55 - 1.2 1.6
-3.47 1.48 -1.31 -1.68 0.8 0.58 0.06 -0.13 -0.3 0.95 -0.45 -5.03 1.42 -0.61 -0.42 -0.46 -0.33 -0.27 -1.89
-2.18 -14.39 -18.01 -13.42 -13.65 - - -10.51 -31.19 - 1.3 0.2 2.58 -0.24 0.42 -1.54 -26.81 2.73 -17.05
0.98 -2.45 -1.59 -1.58 1.89 2.08 -2.4 -0.06 -0.35 0.56 -3.6 - 1.6 -1.57 -2.22 - -4.3 -1.23 -0.6
1.62 1.29 -0.49 - -1.21 0.57 - 1.06 - -2.63 -1.62 - - -0.93 0.63 0.68 1.77 0.02 -2.36
0.86 1.39 - - - 2.09 0.96 - 1.55 -0.52 -1.16 -2.11 -0.12 -0.67 - -0.86 -0.82 0.16 -1.84
- - - 3.54 2.87 - - - - - - - - - - - - - -
0.19 -0.35 - 0.55 1.02 1.39 0.73 -1.94 -1.61 -1.5 -1.52 - 0.77 -0.46 -0.92 0.47 -1.36 1.19 -0.01
- 3.15 2.17 2.38 - - - - - - -3.55 -3.66 - - - - -2.86 -3.98 -4.73
0.63 3.02 - - - - 0.76 0.58 1.35 - - 0.88 - -0.61 - -2.4 -0.56 - -1.99
-1.31 2.39 0.95 1.43 1.38 0.04 -1.65 - -0.35 - -1.38 - -1.32 -0.74 -1.5 -1.33 0.01 -2.57 -0.51
- 2.81 1.85 1.03 - 0.08 - - - 1.42 - -0.82 - -3.59 -1.42 -1.37 -0.27 -1.72 -4.82
1.68 1.82 1.4 -3.81 0.76 1.2 -2.6 -2.57 -0.64 - -3.07 -4.52 -2.09 -0.6 0.0 -1.74 0.43 -0.6 -2.06
0.83 1.02 0.2 -2.22 0.89 0.9 -3.16 - -1.61 -0.42 -0.71 -1.04 0.97 -0.25 -1.7 0.17 0.32 -0.64 0.76
- 2.36 - - - - - - - - - - 2.22 0.16 0.95 - -2.19 2.1 0.72
1.2 2.03 - 0.69 1.51 1.27 -2.01 -0.98 - -1.69 -0.71 - -0.94 -0.6 - -0.3 0.2 -0.51 -2.04
- - - - 1.89 1.7 - - - - - - - 2.17 - 1.54 1.16 1.26 -
3.69 - - - - - - - - 2.61 - - - - - - - - -
2.52 2.49 -0.36 0.75 - 1.32 1.01 - - -0.63 - - - - - - - - -
- 2.4 1.36 - 2.01 1.98 - - - - - 0.54 - -3.28 -1.55 0.35 - - -
- 1.6 -0.61 0.36 - - - 0.15 - -0.61 0.88 -3.34 2.11 0.88 0.84 -0.97 -0.78 -0.02 -1.8
0.27 1.21 -4.44 0.19 2.1 1.96 -1.07 1.06 -0.27 0.62 -4.46 - -0.4 -3.96 - - -4.32 -2.67 -3.36
0.27 1.21 -4.44 0.19 2.1 1.96 -1.07 1.06 -0.27 0.62 -4.46 - -0.4 -3.96 - - -4.32 -2.67 -3.36
- 3.14 1.29 0.36 - - - - 2.36 - - - - - - - - 0.36 -
-0.38 2.5 1.87 -1.68 1.48 1.81 -13.46 - -2.27 -4.68 - 0.42 -3.99 - -2.39 - -3.61 -1.36 -
0.7 0.58 1.3 0.55 1.14 1.64 -10.51 -1.31 -0.59 -2.66 -1.11 0.22 0.51 -1.96 -16.71 -11.33 -33.51 1.06 -31.9
2.1 2.44 - 1.17 1.29 1.14 - - - -0.14 -3.53 - - -2.05 -0.22 - - -1.75 -
2.73 1.76 -0.13 0.65 1.88 -0.91 -0.25 -0.53 -0.98 -2.03 -6.02 - - - - - - - -
0.17 0.73 0.07 0.32 0.87 0.42 0.24 -0.83 -0.46 -1.15 -0.04 -1.61 0.01 -0.57 -0.32 0.1 0.39 0.35 -1.29
-0.26 0.18 0.12 -3.23 0.04 1.24 -0.23 0.39 -0.09 0.39 -0.89 -1.04 -0.78 -0.12 -0.13 0.27 -0.07 0.59 -0.11
1.63 1.73 - 1.16 0.69 1.58 -1.36 - -2.3 -1.86 -1.42 -5.03 0.78 -1.03 -1.07 -2.53 -5.22 0.21 -1.16
- 0.91 0.92 0.55 0.44 0.61 -1.68 - - - -1.19 - 1.99 0.51 0.18 0.37 -4.33 -0.9 0.8
0.33 0.73 -0.16 -0.11 0.19 0.38 0.04 -0.51 0.09 0.07 -0.25 -2.6 0.52 -0.35 -0.71 0.38 0.08 0.04 -0.4
1.69 0.05 0.53 -0.46 0.61 2.18 -0.44 -3.73 -25.07 -1.71 -3.05 0.45 0.9 -10.98 - - -9.94 - 1.02
0.38 0.78 0.55 0.32 0.36 1.26 -0.96 -0.6 0.3 1.02 -2.14 0.9 -0.31 -2.19 -2.35 -0.52 -1.49 -1.52 -1.17
0.38 0.78 0.55 0.32 0.36 1.26 -0.96 -0.6 0.3 1.02 -2.14 0.9 -0.31 -2.19 -2.35 -0.52 -1.49 -1.52 -1.17
0.38 0.78 0.55 0.32 0.36 1.26 -0.96 -0.6 0.3 1.02 -2.14 0.9 -0.31 -2.19 -2.35 -0.52 -1.49 -1.52 -1.17
1.09 1.76 0.02 0.15 -2.04 -0.13 0.17 -0.96 0.76 0.34 -1.21 - - -0.11 - -0.98 - 1.12 0.66
- -3.59 2.35 2.34 3.09 - - - - -21.78 - - - - - -1.97 - - -
2.49 2.22 -0.19 1.65 0.88 1.29 - - - -4.92 -3.69 - -2.14 - - - - -3.91 -
1.0 1.84 0.35 -5.72 1.02 2.31 - -3.41 -2.36 -1.29 - - 1.85 - -0.69 - -10.82 -2.23 -
- 1.38 - -1.44 -2.4 -1.1 -0.93 -2.97 -0.43 -1.1 -0.42 -2.94 2.05 -0.5 1.33 0.58 -0.4 1.46 -1.89
0.08 1.87 0.41 0.45 - -0.29 - 1.05 - - -0.33 - - 0.95 1.55 - - 1.55 -3.02
0.2 2.41 1.38 1.28 0.28 -0.09 -2.61 -1.85 -3.63 -3.11 -0.59 -0.91 -3.56 -1.12 -0.7 -1.04 -0.31 -0.48 -1.49
2.48 2.05 0.78 1.08 1.39 -1.71 -0.27 -1.44 0.34 - - - - -4.11 - - - - -
-1.89 0.96 0.33 -0.28 0.12 2.31 -0.92 -1.27 0.72 0.34 -3.23 - -0.68 -1.07 0.14 0.3 -1.12 -1.2 -1.42
1.94 - - - - - 1.11 0.97 1.14 2.78 - - - - - 0.98 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.