Heatmap: Cluster_11 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
- 1.3 -1.0 - - - - -1.35 - - -0.35 - 0.39 0.51 0.21 2.27 0.47 1.88 0.07
- - - - - - - - - - -0.02 - 2.85 1.26 2.84 - 0.34 - -
- - - - - - - 2.59 - - - - - 1.28 2.94 0.13 0.82 - -
- - - - - - - - - - 0.64 - - - 4.12 - - - -
- - - - - - - - - 1.57 -1.74 2.17 -2.02 0.25 2.45 -0.61 0.87 0.61 -1.7
- - - - - - - - - - 1.22 - - 1.22 2.31 0.58 1.08 2.2 0.21
1.18 - - -2.05 - - -0.77 1.7 1.06 1.13 -1.82 -0.01 -1.21 -3.1 2.51 -2.11 -0.7 - -
- 0.24 - - - - -0.48 0.78 -0.42 -0.64 0.05 0.3 -0.87 0.07 1.75 0.94 0.53 1.76 -
-0.34 - - - - - - - 2.09 - - -0.13 - - 2.62 -4.71 - -0.14 2.58
- - - - - 3.25 - - - - 1.26 - - - 2.83 - - - -
- - - - - - - - 1.03 1.05 - - - 1.24 2.67 -0.95 1.73 0.65 -0.44
- - - - - - 1.48 - - - - - - -0.31 3.94 - - - -
0.76 - 1.05 - 0.34 1.3 - - 1.21 - - - - - 3.2 - - - -
0.34 -0.54 -2.26 -0.36 - -1.52 -2.08 -1.12 -0.29 0.13 0.29 1.2 -2.26 1.16 1.88 -1.25 -0.88 0.56 0.02
-2.96 -1.02 -0.17 -0.22 -3.0 -0.17 -2.04 -2.47 - -4.17 0.69 1.1 -0.02 1.3 2.04 -0.02 -0.11 0.38 -0.77
- - - - - - - - - - - - 2.47 - 2.27 - 0.61 - 2.83
- - - - - - - - - - - - - - 3.97 - 1.75 - -
- 0.82 0.77 - 1.03 - - - 0.41 0.04 -0.46 - -0.14 0.9 0.72 -0.77 0.72 1.54 -0.26
0.16 1.46 -0.36 -0.27 -0.46 0.84 - -1.64 -2.28 -2.29 -1.63 -0.77 0.18 0.86 0.87 -1.34 -1.3 1.78 -1.46
- - - - - - - - - - -1.12 - 1.62 0.57 2.29 2.26 1.86 -0.54 -
- - - - - - - - - - 0.26 - - 2.25 2.67 -1.35 1.45 0.93 0.72
0.25 0.02 -2.98 - - -0.91 -0.69 0.74 -3.0 -3.74 0.18 -24.75 -0.78 -0.99 2.72 0.19 1.16 -0.3 -0.6
- - - - - - 3.23 - - - - - - - 3.27 - - - -
- - 1.04 0.83 - - 0.55 - - - -1.21 - -3.24 1.97 2.82 - -1.99 0.85 -3.06
- - - - - - - - - - - - - - 4.25 - - - -
-0.69 1.95 - - - 0.2 - -1.15 - -0.78 -1.14 -0.02 -2.66 -1.52 2.66 -0.17 -1.64 1.23 -0.99
- - - - - - - - - - - 1.82 - 2.72 2.13 - 1.4 0.94 -
- - - - - - - - - - 0.09 - - 1.95 1.97 0.58 1.4 2.59 -
- - - - - 2.53 0.89 - - - -1.42 1.22 - 1.38 2.02 -1.95 -2.12 0.52 -3.18
1.04 0.02 -1.98 -2.37 -0.17 0.18 - -2.4 0.34 0.24 -0.72 -0.04 -2.39 0.83 0.8 1.52 0.52 0.08 -2.37
- - - - - - - - - - - - - 2.53 3.73 - - - -
- - - - 2.8 - - - - - - - - -1.25 3.24 - 0.55 - -0.51
- - - -0.56 - - -1.19 0.6 -0.02 - 1.06 -1.26 -0.2 1.22 1.83 -0.42 -0.07 1.61 0.47
- - - -0.02 - - 0.81 -0.93 - -1.86 -0.25 - - 0.9 3.33 -0.02 -0.83 0.21 -
- - - - - 1.39 - - - 1.58 - - - 1.04 2.94 1.19 - -0.48 -0.57
- - - 2.15 - - - - - - - - - - 3.4 0.14 0.07 0.91 -
-1.81 0.16 -2.14 -1.1 -4.62 -1.16 -0.74 0.36 -1.53 -0.05 0.53 0.01 0.11 0.62 0.86 0.99 0.74 0.41 0.44
-28.02 - - -3.62 - - -1.19 - -31.67 -4.46 1.15 -0.95 1.33 0.64 1.05 1.85 1.7 1.18 -1.13
- - - - - - - - - - - - - 0.37 3.46 - - - 2.74
- - - - - - - - - - - - - - 4.25 - - - -
-4.02 -2.25 -2.41 -3.06 -3.45 -3.12 -6.65 1.25 -4.27 -2.33 -0.59 -7.19 -5.09 1.96 3.25 -0.83 -0.41 -3.54 -4.84
- - - 1.29 - - 1.7 - - 1.81 - - - -1.09 2.81 - - 1.21 -
- - - - - - - - 2.31 - - - - - 3.81 - - - -
- - - - - - - - - 2.75 - - 2.31 -0.78 2.36 - 0.7 - -
- - - - - - - - - - - - - - 4.25 - - - -
0.4 0.87 -0.1 -0.18 0.07 -0.33 -0.86 -0.84 -0.51 0.88 -1.06 -5.43 -1.46 0.56 0.21 -0.16 -0.73 1.36 -0.02
- - - - - - - - - - - - - 0.59 3.71 - 2.14 - -
-0.23 1.56 - - - - -0.77 - -0.74 -0.67 - 0.48 -1.09 0.56 1.52 1.66 0.77 0.9 -1.2
- - - - - 0.02 - 1.4 - - - - 0.13 -0.88 3.06 - 0.16 2.09 -
- - - - - - - - - - - - - - 3.42 - 3.06 - -
- - 1.1 - - - - - - 2.87 - - - - 3.14 - - -0.39 -
- - - - - - - - - - - - - - 4.25 - - - -
- - - - - - - - - 2.17 - 2.17 - 0.97 2.3 - - 1.65 -
- - - - - - - 0.21 - - - - -12.13 - 4.16 - - - -5.32
- - - - - - - - -0.95 - 1.01 0.87 - 0.73 2.41 1.62 1.61 -0.78 -0.05
- - - - - - - 1.28 1.59 - - - - 2.03 2.2 - - 2.08 -0.63
- - 1.45 -0.37 - - - -0.85 0.88 - -1.33 -7.23 - -0.23 3.13 - 0.74 0.08 -1.56
- - - - -10.78 -2.7 - -3.26 1.12 0.3 0.82 0.2 -30.95 -1.53 2.8 1.4 0.46 -0.93 -0.83
-0.14 1.6 -3.73 -1.37 -0.4 -1.26 -2.06 -0.77 -0.3 -0.11 -0.57 -3.71 -0.52 0.47 0.75 -0.31 0.72 1.07 0.85
- - - - - - - - - - 2.13 - - 2.16 2.84 1.35 - - -1.2
0.06 0.94 - - -0.29 1.43 -1.51 -0.43 - - 0.69 0.33 -3.25 0.29 1.79 0.66 -0.02 -0.34 -1.27
- - - - - - 2.53 2.36 - - - - - - 2.84 - -0.11 - -
- - 1.34 - -0.47 - 0.43 -23.45 2.12 0.55 - - - -23.13 2.71 - - 1.04 -
-2.58 0.64 -1.22 -0.68 0.39 -1.97 -0.95 -0.18 -3.07 -0.13 -0.55 0.71 1.78 -0.56 1.64 -1.07 -0.13 0.13 -2.46
- - - - - 3.3 - - - - 0.76 - - 0.4 2.62 - - - -
- - - -6.64 - - - - -25.63 0.33 -24.67 -0.35 1.33 -2.69 3.26 -1.79 - 2.14 -
- - - - - - - - - 1.5 0.18 - 0.48 -1.41 3.0 2.19 - - -0.5
0.14 - - - - - - - 0.7 - 1.12 1.37 - 1.45 1.01 1.23 0.8 0.85 -0.2
- - - 1.58 0.08 - - - - 1.35 0.06 - - 0.81 2.1 -1.2 1.48 -1.59 0.83
- - -0.14 -0.29 0.06 -0.84 1.46 -1.12 -1.67 0.07 -0.78 1.05 -1.98 -0.07 2.53 -1.28 - -0.12 -3.03
- - - 1.52 - - - 0.72 - - -0.03 -1.31 -0.87 -0.6 2.12 0.98 -0.43 1.72 0.63
1.48 0.61 0.17 - 0.52 0.28 -2.62 - -1.83 -0.77 0.04 -18.9 -9.11 -0.04 1.24 -0.61 1.41 0.01 0.26
- - - - - - 2.08 0.03 - 1.34 - - -0.91 -0.58 3.02 - - -0.13 0.04
- - - - - - - - - - - - - - 4.25 - - - -
- -1.07 - - - -0.55 - - - -0.45 1.35 - - 0.56 2.4 1.57 1.32 1.01 -1.58
- - - - - - - - - - - - - - 4.25 - - - -
- - - - - - - - - - - - - 2.42 2.49 - - - 3.0
-2.21 - -2.48 - - - - - - - -2.3 -1.07 2.61 1.21 1.32 - -4.45 0.44 2.49
0.06 -2.07 -1.85 -0.19 0.09 0.67 -0.49 -0.54 -0.24 -0.36 -0.96 -0.39 0.15 -0.31 0.38 0.62 0.78 0.95 0.27
0.84 -1.02 -2.34 - -0.7 -14.75 -5.59 - -18.24 - -0.12 1.5 -7.24 1.22 1.26 2.23 -3.63 1.17 -1.42
- - - - - - - - - - - - - - 4.25 - - - -
0.88 -0.59 -1.59 -4.46 -5.42 -1.16 -0.24 -2.22 -0.64 -0.15 -1.54 - 1.71 0.53 1.93 0.81 0.5 - 0.01
1.04 -0.23 -0.16 -2.81 0.01 0.67 0.27 0.5 0.17 -3.31 -1.24 - -3.64 -0.0 1.44 -0.88 -0.55 0.91 0.36
- - - - - - - - - - - - - 1.88 3.36 - 1.2 1.25 -1.48
- - - - - 0.66 - - -0.68 -0.62 -2.2 -2.52 - 1.16 2.29 0.84 0.1 1.52 1.53
-1.07 -2.44 -0.56 -1.12 - - -2.43 1.42 -2.07 -1.97 -4.33 1.22 0.78 0.45 1.49 -0.16 -0.67 1.58 0.1
1.24 0.53 -0.65 -21.82 0.54 - -9.81 -0.62 -2.31 -1.49 0.3 0.02 -2.09 1.09 1.66 -0.66 -0.07 0.56 0.11
- - - - - - - - 1.71 - - - - 1.25 2.55 0.95 1.14 1.25 -0.01
1.05 0.59 - -0.19 0.02 0.9 -1.28 -0.1 -1.03 -0.19 0.15 -1.06 -1.99 0.34 0.74 -0.71 -0.25 0.98 -0.42
-2.52 1.0 -1.29 - 1.09 -0.12 -1.03 -0.03 -1.56 -0.16 -0.26 - 0.96 -0.18 1.35 -0.56 0.43 0.38 0.14
- - - - - 1.9 - - - - - - - 1.45 3.49 - - 0.35 -
0.86 -0.23 -0.68 -0.58 0.16 0.26 -0.11 -0.96 -0.17 -1.39 0.44 - -1.0 0.47 1.05 0.4 0.37 0.58 -0.76
- - - - - - - - - - -0.38 - - 0.54 3.84 -1.21 1.02 - -
-1.43 -1.97 -2.18 -1.59 -1.01 -1.86 -0.2 -0.23 -0.37 -1.33 -0.08 -2.16 0.84 1.18 2.46 -0.25 0.37 -0.56 -0.74
- 0.56 - - - - -1.69 - 0.69 - 0.4 - - 2.12 2.31 -0.02 0.65 0.42 0.11
- - 2.01 - - - - - - - - - - - 3.91 - - - -
-1.01 - -3.04 -0.82 -1.06 -0.53 -0.61 1.07 -0.48 -0.16 -0.26 0.74 -0.41 0.21 0.93 1.2 0.58 0.83 -1.38
-1.01 - -3.04 -0.82 -1.06 -0.53 -0.61 1.07 -0.48 -0.16 -0.26 0.74 -0.41 0.21 0.93 1.2 0.58 0.83 -1.38
- -0.49 - 1.87 - - -28.44 - -18.09 - - 1.38 - - 1.8 - - - 3.1
- -2.11 0.72 -0.41 0.48 -0.07 -1.89 -3.08 -0.45 -1.84 -0.56 -1.54 -0.4 1.32 1.76 -0.22 0.21 1.11 -0.37
- - -0.04 - - 1.06 - - - - 1.48 1.7 - 0.62 1.96 -0.04 1.03 -0.72 -0.22
- -3.5 -0.77 0.07 -2.42 0.12 0.54 0.15 -0.74 -0.83 0.1 -0.05 0.06 0.63 1.06 0.98 0.6 0.57 -0.75
0.04 - 0.03 - - - 0.26 - 0.29 - - -0.38 - 1.44 2.52 - - 2.38 -3.54
- - - - - - - - - - - 0.67 -16.61 - 4.12 - - - -
- -1.7 - - - -1.26 - - - - 0.3 1.64 0.73 1.29 2.55 0.24 0.44 0.37 -2.64
-4.82 -5.28 -2.07 -2.45 -2.07 -3.55 -2.72 -2.67 -4.84 -3.14 0.12 -3.6 1.14 0.91 3.25 -0.16 -0.44 -0.11 -1.18
- - - - - - - - - - - - - - 4.25 - - - -
- - -1.21 -1.41 - -0.58 - - - - 1.68 - - 1.12 2.67 -1.54 -0.25 0.14 1.8
- - - -27.88 - - -1.6 -7.84 0.72 0.62 -0.54 0.63 -1.18 0.49 1.46 2.0 -0.29 1.41 0.23
-1.24 0.17 -4.66 0.45 0.24 -1.04 0.09 -1.37 -0.3 -1.38 - 0.29 1.88 - 2.6 - - - -0.39
- - - - - - - - - 1.79 - - - -1.02 3.65 - - -1.11 1.0
- - - - - - - - - - - - - - 3.97 - 1.72 - -
- - - - - - 2.48 - - - - - - 0.05 3.22 1.62 - - -
1.53 - - 0.15 - - - - -1.08 - -0.1 - - 1.18 2.98 -0.33 -0.98 0.99 -2.84
- - - - - - - - - - - - - 3.12 3.36 - - - -
- - - - - - - - - - - - 2.52 - 3.31 - -0.34 - 1.34
0.92 1.22 -2.9 -1.5 -0.33 1.62 - -0.22 -0.97 -2.05 -0.89 -3.8 0.92 -1.64 1.32 - 0.08 0.93 -0.86
- - - - - - - - - - -1.24 - -0.78 1.35 2.97 - 0.79 2.56 -
- - - 1.6 2.08 - 0.04 - - 1.15 - - -1.32 -0.96 2.77 - - -0.44 -
- 0.08 - 1.99 2.66 - - 1.15 - - - - - -0.33 1.88 -1.73 - - -0.59
- -0.51 0.39 0.34 - -2.24 - - 0.01 -1.73 -0.68 -0.32 -1.14 1.17 1.3 0.88 0.9 0.65 1.22
- - - - - - - - - - -0.06 - - 0.38 2.63 -0.55 - - 3.3
- - - - - - - - - - - - - - 4.25 - - - -
- 0.39 - -0.97 - - - 0.83 -1.57 - -1.06 - 2.26 -0.75 1.82 0.35 0.25 0.6 0.76
- - - - - 1.33 - - - - - - - - 2.91 0.01 2.64 - 0.79
-0.59 0.04 0.19 -1.31 -0.33 1.14 -0.84 -0.55 -1.27 -2.58 -1.17 -1.77 1.48 -1.43 1.57 0.21 0.02 0.17 -0.36
- - 1.53 - - - - - - - 0.02 - - -0.62 3.57 - 0.84 -0.41 -
- - - - - - - - - - - - - - 4.25 - - - -
- - - -15.61 - -9.8 0.89 -0.65 0.78 - 0.89 -2.25 1.71 -0.09 1.96 0.05 0.06 0.52 0.17
- - - - - - - - - - - - - 2.44 3.76 - - - -
0.09 0.43 - 0.1 0.53 0.39 0.29 -0.71 -0.98 0.1 -0.29 -2.39 1.2 -0.83 1.05 0.37 -0.37 -0.08 -1.32
- - - - - - - - - - -2.55 - 2.77 1.33 2.99 -0.33 -2.07 -1.23 -3.07
- - - - - 1.93 - - - - -0.76 - - -1.13 3.82 - - - -
- - - - - - - - - - - - - - 4.25 - - - -
- - 1.95 - - - - - 0.68 2.02 - 1.01 - - 0.93 0.34 0.59 0.52 0.44
- - - - - 2.91 - - - - - - - 0.57 3.08 - - - 0.62
- - -0.62 0.87 - - - -3.81 -0.41 - 0.32 -1.82 -3.43 2.22 2.62 -2.43 -0.83 0.8 -0.38
- - - - - - - - - - - - - - 3.08 - 2.76 - 1.91
- - - - - - - - - 1.25 0.75 - - 0.83 2.57 -0.13 1.76 0.38 0.66
0.7 1.17 -2.9 - 0.68 - - -2.38 -1.02 - -0.01 0.92 -0.7 -1.55 1.52 -0.04 0.51 0.91 0.78
- - 0.52 - - - -0.76 - - - 0.43 - - 2.38 1.6 0.59 0.87 1.4 0.51
0.16 0.49 - - - 0.45 -1.25 -0.29 0.53 -0.2 0.23 -1.72 -1.89 0.97 2.1 -0.03 0.63 -0.22 -2.4
- - - - - 2.77 - 1.26 - - -1.1 - - -0.43 2.54 - 0.8 0.0 -
- - - - - - - - - - - -1.14 - 0.48 3.42 - 1.97 1.32 -
- - - - - - - - - - - 2.47 - - 3.61 0.3 - - -
- - - - - - - - 2.21 - - 1.14 - 1.06 2.67 0.88 - 0.93 -
- - - - - - - - - - - - - - 4.03 0.8 - -0.18 -
- - - - - - - - - - - - - - 4.25 - - - -
- - - - - -0.28 - - - - - 2.5 - - 3.58 - -6.0 - -0.91
-0.47 0.39 -0.48 0.56 0.74 -0.14 -0.44 -0.92 -0.06 -1.3 -0.5 -3.39 0.19 0.59 1.02 0.1 -0.04 0.69 -1.24
0.29 -1.73 - 1.0 1.31 -0.34 -0.14 -2.6 0.85 -0.03 -1.32 - -2.07 -0.04 1.83 -0.28 -2.13 0.74 -1.06

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.