Heatmap: Cluster_29 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Diurnal Dark 2h	Diurnal Dark 6h	Diurnal Light 2h	Diurnal Light 6h	Diurnal Light 10h	Diurnal Light 14h	20°C Liquid	4°C Liquid	20°C Desiccation	4°C Desiccation	20°C plate	CadmiumCl 250 µM, 24h	Dark, 24h	HL (900 µmol photons m-2 s-1, 1 h)	Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h	Mannitol 300 mM,24h	NaCl 150 mM, 24h	UV (exactly 385 nm, 1400 µW/cm2, 1h)	pH = 9, 24h
Zci_00248.3	-	-	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_00450.1	-	-	3.63	-	-	-	2.73	-	-	-	-	-	-	-	-	-	-	-	-
Zci_00599.1	-	-	4.01	-	-	-	-	-	-	-	-	-	-	1.54	-	-	-	-	-
Zci_00793.1	-	-	2.68	-	-	3.1	-	-	-	-	-	-	-	1.15	-	-	-	0.84	-
Zci_01236.1	-	-	3.48	-	1.3	0.72	-	-	-	-	-	1.89	-	-	-	-	-	-	-
Zci_01283.1	-	0.6	1.16	0.69	-0.82	0.24	-0.93	-1.11	-	-	-0.15	-0.33	-2.23	1.08	0.98	0.2	-1.03	1.28	-0.24
Zci_01411.1	-	-	-	-	2.94	-	-	-	-	-	-	-	-	2.27	1.52	-	-	1.85	-
Zci_01418.1	-	-	-	-	3.73	2.04	-	-	-	-	-	-	-	-	-0.65	-1.09	-	-1.02	-
Zci_01915.1	-0.25	-	-	-	2.88	-	-1.3	-1.33	-	-1.26	-1.06	2.72	-0.05	-1.2	-	-0.23	-2.26	-	-4.17
Zci_02144.1	-	-	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_02336.1	-	-	-	-	3.95	-	-	-	-	-	-	-	-	-0.35	-	0.48	0.45	-	-
Zci_02648.1	2.85	-	3.56	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_02665.1	-	-	-	-	3.83	-	-	-	-0.75	1.64	-	-	-	-2.39	-0.86	-	-2.58	-	-2.6
Zci_02934.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_03047.1	-	-	2.07	-	-	-	-	-	-	-	-	-	-	2.55	0.45	0.88	1.19	1.78	-
Zci_03099.1	-	-	2.78	-	-	2.27	0.15	-1.18	-	-0.97	-3.25	-	-	-1.07	1.49	-	-0.7	-0.3	-1.19
Zci_03206.1	-	-	2.22	-	3.37	-0.65	-	-	-0.94	-0.87	-3.44	-	-1.5	-2.59	-0.64	-1.68	-1.12	-	-1.88
Zci_03261.1	-	-	-	-	3.26	-	-0.42	-1.5	-0.17	-0.26	-	-	-	-0.73	-3.0	1.49	-1.77	1.13	-0.76
Zci_04395.1	-	-	-	1.27	2.61	-	-	-	0.56	-	0.75	-	-	1.7	-	-1.49	-2.15	1.56	-0.78
Zci_04396.1	-	-	-	1.27	2.61	-	-	-	0.56	-	0.75	-	-	1.7	-	-1.49	-2.15	1.56	-0.78
Zci_04764.1	-	-	-	1.61	2.86	1.45	-	1.21	-	-6.97	-	-	-	-	-	-	-	1.67	-1.26
Zci_04961.1	-	-	-	-	3.2	0.86	-	0.19	-	0.26	-	-0.28	-	-0.49	-	-0.16	0.85	-0.79	-0.25
Zci_05118.1	-	-	2.9	-	-	-	-	-	0.22	2.26	-	0.69	-	0.09	0.27	-	-1.84	-	0.48
Zci_05162.4	-	-	3.5	0.96	-	0.63	0.69	-	-	-	-	-	-	0.14	-	-1.16	0.07	-	-
Zci_05162.5	0.16	-	2.43	-1.05	-	3.13	0.31	-	-	-	-	-	-	-2.58	-	-1.0	-2.89	0.1	-2.47
Zci_05312.1	-1.42	-	1.88	-0.18	0.01	-0.05	-1.66	-1.6	-1.29	-0.26	-1.73	-2.17	-1.55	0.94	0.93	-0.54	0.51	1.44	-0.52
Zci_05695.1	-	-	0.47	-	0.19	1.42	-	0.05	-0.2	-1.26	-0.48	-	-	0.62	2.0	0.12	0.09	1.06	-0.04
Zci_06332.1	-	-	2.34	-	-	-0.03	-	-	-	-	-	-	-	-0.37	2.4	0.28	0.57	2.07	-
Zci_06590.1	-	-	2.62	-	-	-	-	-	-	-	-	-	-	0.09	-	3.01	1.65	-	-0.8
Zci_06711.1	-	-	2.87	-	-	-	-	-	-	-	0.18	-	-	2.67	-	1.13	-	1.01	-
Zci_06724.1	-	-	3.38	1.69	-	1.65	-	-	-	-	-	-	-0.63	-	-	-0.28	-	-	-0.34
Zci_06758.1	-	-	0.76	1.02	1.72	-	-	-	-	-	0.63	1.96	-	-1.35	1.1	-0.13	-1.43	1.34	-2.29
Zci_06782.1	-0.68	0.74	1.36	-	0.89	2.04	0.9	-	-	-	-1.27	1.91	-	-0.22	-0.6	-	-1.94	-	-1.42
Zci_06930.1	-	-	2.48	1.36	1.39	-	-	-	0.62	0.2	0.9	-	-	0.05	-	-0.48	-1.85	0.72	-
Zci_07162.1	-	-	1.46	-	-0.08	1.27	-1.66	0.3	-1.47	2.04	-0.22	-	-	-1.66	0.26	-1.65	-0.28	1.44	-0.66
Zci_07401.1	-	0.39	1.7	1.3	-	1.15	-	0.74	-	-	-0.93	-	-	-	-	0.11	-0.48	2.33	-0.45
Zci_07470.1	-	-	-	-0.65	3.51	2.11	-	-	-	-	-0.7	-	-	-3.56	-0.59	-	0.35	-	-
Zci_07479.5	-	-	3.32	-	-	-	-	-	-	-	-	-	-	3.16	-6.14	-	-	-16.04	-13.25
Zci_07633.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_07860.1	-	-	1.91	-	-	2.21	-0.3	-	-	-	-	-	-	1.77	-	-	-	2.39	0.18
Zci_07962.1	-	-	3.22	-	2.83	-	-	-	-	1.2	-	-	-	-	-	-	-1.72	-	-
Zci_08046.1	-	-	-	-	3.1	-	-24.81	-	-	1.64	-	-	-	-	-	-	2.87	-	-
Zci_08046.4	-	-	-	-	3.1	-	-24.81	-	-	1.64	-	-	-	-	-	-	2.87	-	-
Zci_08048.1	-	-	3.34	-	-	-	-	-	-	2.89	-	-	-	-	-	-	0.52	-	-
Zci_08443.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_08512.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_08713.1	-	-	2.87	-	-	3.29	-	-	-	-	-	-	-	0.33	-	-	-0.66	-	-
Zci_08892.2	-	-	1.56	2.56	-	-	-	-	-	-	-1.06	-	-	-	2.06	1.02	1.8	-	-
Zci_08951.1	-0.21	-0.8	1.21	0.57	0.73	0.6	-1.08	-5.12	-1.5	-0.43	0.38	-0.16	-2.69	0.12	-2.27	-0.01	0.78	0.83	-0.22
Zci_08965.1	-	-	-	-	2.94	-	1.78	1.38	-0.5	-0.97	-	1.81	-	-	-	-	-	-0.87	-
Zci_08970.1	-	-	-	0.34	3.37	-	-	1.48	-	0.66	0.87	-	-	-1.06	-	-1.32	-1.52	-	-
Zci_08972.1	-	-	1.53	-	3.9	-	-	-	-	-	-	-	-	-0.89	-	-	-0.58	-	-
Zci_09219.1	-	-	3.08	-	-	1.7	0.52	2.1	-	-	-	-	-	-0.16	-	-	-0.57	-	-
Zci_09232.1	-	-	2.83	-	-	-	-	1.44	-	1.06	-	-1.07	-	-0.03	-2.79	-	0.47	1.89	-1.26
Zci_09270.1	-	-	-	1.56	2.82	-0.62	-	-1.02	-0.85	-	-0.54	-2.69	-3.16	-0.99	0.66	0.29	-2.89	1.28	-1.09
Zci_09323.1	-	-	-	-	3.83	-	-	-	-1.52	-	-1.63	-	-3.91	0.16	0.64	-2.6	-3.78	-1.11	-0.69
Zci_09360.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_09520.1	-	-	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_09528.1	-0.32	0.88	2.1	-0.93	-	-0.11	0.79	-0.84	-0.66	0.84	-1.7	-	-	-1.08	0.86	-1.73	-0.01	1.01	-
Zci_09559.1	-	-	-	-	3.62	-	-	-	-	-	-	-	-	1.94	-	-	1.52	-	-
Zci_09577.1	-	-	-	-	3.72	-	-	-	-	-	-	-	-	1.15	1.87	-	-	-	-
Zci_09818.1	-	-	3.27	-	-	-	-	-	-	-	-	-	-	-	-	2.24	-	2.22	-
Zci_09818.2	-	-	3.27	-	-	-	-	-	-	-	-	-	-	-	-	2.24	-	2.22	-
Zci_09924.1	-	-	3.57	-	-	-	-	-	-	0.41	-	-	-	-2.26	-	1.02	0.91	0.43	-1.55
Zci_09929.1	-	-	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_10006.1	-	-	3.83	0.92	-	-	1.22	-	-	-	-	-	-	-	-	-	-0.78	-	-
Zci_10053.1	0.4	-0.22	0.64	1.1	0.26	1.59	-3.66	-	-3.37	-2.78	-1.4	-1.43	-3.34	-1.03	0.99	0.76	0.91	0.58	-2.35
Zci_10417.1	-	-	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_10626.1	-	-	3.46	2.28	0.78	-	-	-	-	-	-	-	-1.25	-1.81	-	-	-	-0.45	-
Zci_10832.1	-	-	2.32	-	1.03	1.35	-	-	-	0.95	-	-	-	-0.21	1.4	1.24	-1.26	-0.26	-1.36
Zci_11035.1	-	-	-	0.98	2.36	-	0.74	-	-	-	0.73	-	1.78	0.44	-1.34	-	1.41	-	-0.42
Zci_11133.1	-	-	3.11	-	-	-	-	-	-	-	-	1.15	-	-	-	-	-	3.03	-
Zci_11336.2	-1.74	-	2.22	-	-2.4	2.3	-	-	-	1.05	-0.32	-	-	-0.32	0.48	-1.91	0.46	-2.48	1.04
Zci_11361.3	0.94	-0.09	-	-	-	0.4	-0.48	-1.43	0.05	-	0.24	1.81	-1.88	1.08	0.54	-1.61	0.9	0.44	-0.68
Zci_11452.1	-	-	2.0	-	2.64	-	-	-	-0.43	1.15	-2.83	-	-	1.05	0.45	-1.52	-	0.91	-
Zci_11600.1	-	-	1.97	-	-	-	1.1	-	-	1.07	-2.35	-	-	2.76	-1.28	-	-0.85	0.55	0.52
Zci_11664.1	-	1.1	-	-	-	2.62	-	-	-	1.49	0.78	2.33	-	-0.89	-	-	-0.72	-	-
Zci_11726.1	-	-	3.94	-	-	-	-	-	-	-	-	-	1.86	-	-	-	-	-	-
Zci_11780.1	-0.08	-0.53	1.34	0.38	0.17	1.09	0.15	-0.87	-1.05	-2.6	-0.27	-3.64	0.31	-0.14	-0.37	0.74	-0.05	0.04	-1.09
Zci_11801.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_11923.1	-	-	-	-0.15	2.72	-	2.75	-	1.02	-	-	-	-	0.08	-	-2.14	-0.89	-0.23	-3.67
Zci_11935.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_12210.1	0.06	-1.02	1.47	0.61	-0.19	0.29	-3.83	-3.84	0.19	-0.63	-0.55	-0.5	-0.99	-1.46	-0.81	0.74	1.28	-0.24	0.45
Zci_12236.1	-	-	3.11	-	-	-	-	-	-	-	-	-	-	1.02	-	-	-	3.06	-
Zci_12261.1	-	-	1.09	1.99	-	-	-0.06	-	-	0.0	0.06	-1.85	-	0.89	1.16	-2.23	0.57	1.78	-1.29
Zci_12542.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_12572.1	-	-	3.6	-	-	-	2.54	-	0.06	-	-	-	-	-	-	-	-	-	-
Zci_12676.1	-	-	3.76	-	-	-	-	-	-	-	-	-	-	0.7	-	-	1.94	-	-
Zci_12787.1	-	-	-	-	2.89	-	-	-	-	1.13	0.99	-	-	0.27	-	1.14	0.88	-0.49	0.54
Zci_12941.1	-	-	2.65	2.56	-	-	-	-	-	-	-	-	-	-0.03	1.07	-0.66	-0.4	-0.17	0.53
Zci_13498.2	-	-	1.7	-	-	2.35	-	1.53	-12.52	-	-	1.23	-	-1.97	0.44	0.71	-	1.12	-
Zci_13516.1	-	-	-	-	3.96	-	-	-	-	1.79	-	-	-	-	-	-	-	-	-
Zci_13551.1	-	-	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_13576.1	1.1	1.28	3.1	-	-	-	1.62	-	-	-	-	-	-	-	-	-	1.05	-0.5	-
Zci_13797.1	-	-0.91	1.22	-	2.64	-0.61	-0.61	-0.7	-	-	0.08	-	-	0.37	-2.57	0.41	0.23	1.36	-1.34
Zci_13856.4	-28.1	1.14	1.28	-	-	1.57	-	-	0.29	0.27	-	0.98	-8.63	0.39	-0.1	-0.44	1.18	-	0.8
Zci_13880.1	-	-	0.59	-	3.11	0.08	-	-	-	0.8	-1.75	-	-	-0.57	1.01	-	0.74	-0.64	-0.35
Zci_13893.2	-	-	-	-	3.49	-	-	-	-	2.95	-	-	-	-	-	-	-	-	-
Zci_14181.1	-	-	-	-	3.39	-	-	-	-	-	-0.79	-	-	-1.07	-	-0.02	2.07	1.05	-2.03
Zci_14192.1	-0.92	-0.95	-1.56	1.14	2.62	1.77	-0.29	-	0.06	-	-1.27	-	-3.22	-1.97	0.3	-0.69	-0.85	-1.03	-1.65
Zci_14207.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_14271.1	-0.1	-	1.94	0.53	0.54	-	-0.77	-	0.41	-2.58	-0.2	-4.46	1.58	-0.3	-1.32	0.81	0.36	-0.34	-1.7
Zci_14342.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-20.51	-	-	-	-	-
Zci_14426.1	2.27	-	2.83	-	2.04	-	-	-	-	1.2	-	-	-	-	-	-	-0.59	-	-
Zci_14474.1	-	-	-	-	4.16	-	-	-	-	-	-0.34	-	-	-	-	-	-	-1.35	-
Zci_14795.1	-3.52	0.11	2.86	0.56	2.57	-8.47	-18.03	-1.28	-21.47	-0.47	-27.86	0.81	-13.6	-27.61	-1.85	-11.67	-16.64	-9.47	-
Zci_15255.1	-	-	3.21	-	2.81	-	0.93	-	-0.46	-	-	-	-	-	-	-	-	-	-3.05
Zci_15270.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_15271.1	-	1.62	2.54	-	-	2.36	-	-	-	-	-	2.01	-	-0.79	-	-	-	-1.58	-
Zci_15414.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_15645.1	-	-	-	-	2.95	1.14	-0.19	-	0.48	-	-0.29	-1.44	-1.26	-0.32	-1.48	0.05	-0.49	-0.39	0.58
Zci_15706.1	-1.7	-1.35	0.39	1.36	1.82	-2.56	0.38	0.05	0.52	-0.8	-1.2	-0.64	-1.9	-1.4	-2.61	0.37	0.66	0.17	-1.04
Zci_15707.1	-1.7	-1.35	0.39	1.36	1.82	-2.56	0.38	0.05	0.52	-0.8	-1.2	-0.64	-1.9	-1.4	-2.61	0.37	0.66	0.17	-1.04
Zci_15860.1	-	-	3.33	-	-	-	-0.03	-	1.36	1.33	-	0.88	0.05	-	-	-	-	-	-
Zci_15905.1	-	-	3.29	-	-	-	-	-	-	-	-1.38	-	-1.18	-0.63	-0.67	-0.83	1.37	1.98	-
Zci_16016.1	-	-	4.18	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-0.23	-
Zci_16046.1	-	-	4.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Zci_16066.1	-	-	2.25	-	-	2.09	-	-	-	1.81	-0.41	-	-0.23	-	-	0.51	-	-	1.78
Zci_16137.1	-	-	-	-	3.97	-	-	-	-	-	0.84	0.57	-	-	-	-	-	-	-
Zci_16441.1	-	1.67	-	-	-	1.76	-	-	-	-	-0.7	2.52	-2.5	-0.78	-2.07	0.34	1.93	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.