Heatmap: Cluster_7 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
1.46 0.39 -2.49 -3.02 -1.99 -0.58 -3.43 0.61 -0.8 2.09 -1.81 -2.89 1.99 -1.85 -1.11 -0.76 -0.55 -1.17 -1.21
0.42 0.39 0.24 0.49 0.14 0.16 -0.11 -0.22 0.37 0.15 -0.2 0.2 0.34 -0.43 -0.51 -0.54 -0.51 -0.61 -0.79
- - - - 0.73 - - - 1.07 2.16 0.34 0.25 - 1.71 - 0.68 -0.09 -0.92 0.99
- - - - - - -0.26 0.2 2.89 2.43 - - -2.38 - 0.7 - -0.57 0.8 -
-0.84 -2.98 -1.56 -3.1 - -1.13 0.8 0.43 1.6 2.01 -1.04 - 0.51 -0.53 -0.46 -0.07 0.03 0.47 -0.85
-0.01 0.44 0.42 -1.64 -1.72 -0.06 -1.22 -2.62 1.87 1.53 -3.38 0.97 -24.64 -1.06 0.23 -0.88 0.61 -1.37 -1.27
- - - - - - - - 3.0 2.94 - - - -0.67 - - - 1.43 -
- - - - - - - - 2.41 3.53 -0.17 - - - - - 0.31 - -
-0.44 -0.5 1.14 0.59 0.52 0.78 -2.54 -6.53 2.01 1.68 -2.05 0.21 -0.98 -3.69 -6.86 -3.29 -0.86 -1.36 -2.05
0.86 0.77 0.61 0.29 0.51 -0.09 0.19 -1.71 0.37 0.58 -0.5 -1.05 0.51 -0.97 -1.22 -0.32 -0.84 -0.4 -1.15
0.5 0.57 0.08 0.38 0.27 0.27 -0.01 -0.15 0.61 0.34 -0.37 -0.64 0.18 -0.54 -0.54 -0.5 -0.5 -0.48 -0.81
1.32 - - 0.23 - - - - 1.19 3.19 -3.1 0.92 - -1.05 -0.49 - -1.5 - -1.37
0.5 0.88 -0.99 -0.56 -1.0 -0.59 -0.41 -0.3 0.63 1.15 -0.73 -0.64 0.85 -0.34 -0.07 -0.26 -0.17 0.03 -0.88
0.14 0.01 0.28 0.43 0.1 -0.1 0.13 -0.12 0.55 0.32 -0.16 -0.0 0.19 -0.23 -0.3 -0.47 -0.45 -0.49 -0.45
0.44 0.47 0.3 0.62 0.24 0.38 0.13 -0.02 0.54 0.28 -0.4 -0.57 0.42 -0.64 -0.66 -0.88 -0.76 -1.08 -0.71
- - - - - - - - 2.71 2.29 -1.36 - -0.95 -3.11 0.62 0.83 1.39 - -0.64
- - - - - 1.37 - - 2.11 2.05 -1.03 - 1.88 0.44 -1.39 - 0.42 -0.52 -
0.09 -2.93 1.03 0.33 0.45 0.35 -3.28 -4.81 1.81 2.08 -2.57 0.26 -2.12 -2.8 -2.22 -1.83 -1.56 0.1 -1.55
0.99 0.67 -0.51 -0.45 -0.26 0.06 -0.65 -0.29 0.58 1.11 -0.82 -0.78 0.75 -0.83 -0.51 -0.27 -0.25 -0.41 -1.01
- - - - - - - - - 3.4 - - - - - 1.03 - 2.68 -
- - - - - - - - 3.32 3.18 - - - - - - - - -
- - -0.07 - - - 1.04 - 2.97 2.76 -2.36 - - -2.56 - - - -1.34 -0.74
0.66 0.29 -0.15 0.22 0.4 0.25 -1.14 -0.56 -0.03 0.63 -0.57 -0.38 0.88 -1.12 -0.51 0.08 -0.54 0.01 -0.39
- - - - - 0.51 0.88 -0.88 1.7 3.14 -2.62 - -3.03 -0.21 -2.0 -1.07 -1.22 -0.56 -2.82
- - - - - - - - - 3.44 - - - -1.13 - - - 2.95 -
- - - - - - - - - 3.44 - - - -1.13 - - - 2.95 -
- - - - - - - - 3.41 3.06 - - - - - - - - -
0.21 0.19 0.3 0.47 0.18 0.06 0.03 -0.13 0.58 0.38 -0.25 -0.14 0.11 -0.46 -0.35 -0.45 -0.56 -0.29 -0.72
0.29 0.21 0.23 0.44 0.17 0.18 0.27 0.06 0.55 0.34 -0.24 -0.08 0.22 -0.38 -0.5 -0.77 -0.64 -0.85 -0.67
- - 1.79 - - 1.83 - - 1.28 2.53 -0.49 -2.57 - -0.29 - -22.82 - 1.07 -
- - - - - - - - 3.06 3.13 - - - - - 0.94 - - -
0.95 1.25 -0.4 -1.2 -0.75 -0.34 -0.19 0.15 2.03 1.23 -2.45 -1.16 -3.45 -2.09 -1.27 -0.49 -1.04 -0.32 -1.68
0.5 0.72 0.27 0.61 0.31 0.35 0.22 0.05 0.78 0.42 -0.56 -1.37 -0.3 -0.85 -0.54 -0.59 -0.71 -0.58 -1.43
- - - - 1.79 - - - 2.06 3.51 - - - - - - - - -
0.59 0.44 0.55 0.26 -0.06 0.1 -0.4 -0.27 0.47 0.31 -0.41 -1.9 0.52 -0.31 -0.5 -0.09 -0.41 -0.27 -0.43
1.66 1.46 -1.31 -1.17 -2.47 -2.55 0.23 -0.12 1.65 1.14 -2.14 -3.93 -1.43 -0.51 -0.36 -1.17 -0.66 -0.08 -1.7
0.16 0.28 0.07 0.47 0.1 0.09 0.07 -0.07 0.62 0.46 -0.3 -0.19 0.22 -0.42 -0.5 -0.59 -0.48 -0.46 -0.38
1.48 1.46 -1.96 -1.54 -1.74 1.01 -4.55 -0.68 0.25 1.74 -1.72 -0.24 1.09 -2.0 -2.07 -2.28 0.03 -2.25 -2.61
- - - - - - - - 3.24 3.26 - - - - - - - - -
- - - - - - - - - 2.69 0.23 - - 0.06 0.88 -0.15 0.79 2.55 -
- - - - - - - - - 3.06 -1.45 - - -1.62 -0.34 0.29 -0.1 2.69 -0.89
- - - - - - - - - 3.66 - - - -0.37 - - -3.32 2.45 -
- - - - - - - - - 3.03 - - - 0.43 - 1.05 - 2.89 -
- - - - - - 2.06 0.41 2.19 2.47 -1.13 - - 0.11 -1.46 0.25 -1.81 - -
1.13 -1.65 0.63 0.13 0.16 -0.08 -1.35 -2.82 1.76 1.87 -2.67 -4.91 1.15 -1.7 -2.27 -1.93 -1.39 -1.5 -1.81
- - - - - - - - 2.43 3.13 - - - - 2.28 - - - -
- - - - - - - 1.07 1.39 2.47 - - - 1.0 0.27 -0.69 -0.9 1.71 0.12
0.15 0.39 0.46 0.59 0.06 0.09 0.4 0.15 0.96 0.64 -0.45 -0.65 -0.34 -0.58 -0.7 -0.68 -0.69 -0.73 -1.45
- - - - - - - - 3.72 2.17 - - - - - - - 0.44 -
1.12 0.56 -4.11 -3.69 0.74 -0.07 -1.1 1.18 -0.14 2.55 -5.57 -2.33 1.26 -4.09 -4.38 -3.02 -3.47 -2.81 -5.02
- 1.73 - - - - - - 1.92 3.0 - - 0.67 - - - - 1.2 -
- - - - - - - - 2.1 3.42 0.06 - - 0.92 - -0.95 -0.99 - -
0.95 0.16 -0.84 -1.11 -0.63 -0.21 -1.26 -0.63 -0.23 1.72 -0.58 0.35 1.23 -1.22 -0.62 -0.0 0.11 -1.11 -1.73
1.42 0.68 -2.1 -0.95 -0.24 -0.83 -1.36 -0.32 0.86 1.85 -2.26 -0.01 1.39 -1.72 -0.77 -1.4 -1.45 -1.8 -2.36
- - 0.5 - - - - 0.65 1.87 2.82 -1.82 - 0.58 - - -0.24 0.25 -1.18 0.02
0.42 1.22 0.8 -0.44 -0.68 -1.05 -2.71 -1.86 0.34 1.65 -0.35 -2.92 1.44 -1.76 -1.02 0.25 -0.43 -1.72 -2.05
0.71 0.76 -1.58 -0.87 0.2 1.01 -1.55 -1.74 0.57 0.96 -1.34 0.18 0.26 -0.97 -0.68 0.31 0.2 -0.08 -1.49
0.71 0.76 -1.58 -0.87 0.2 1.01 -1.55 -1.74 0.57 0.96 -1.34 0.18 0.26 -0.97 -0.68 0.31 0.2 -0.08 -1.49
- - - - - - - - - 3.47 - - - - - - - 2.99 -
0.95 1.43 -0.06 0.97 0.51 1.05 0.99 0.49 0.74 0.88 - -16.99 0.07 -8.3 - - -6.16 - -
- - - - - - - - 3.0 2.94 - - - -0.67 - - - 1.43 -
- - 1.05 - 0.42 - -1.46 -0.6 3.1 2.5 - - - - - - -1.55 - -
- - - 2.13 - - - - 2.38 3.24 - - - - - - - -15.41 -
- - - 1.34 - - 0.24 0.07 2.6 3.03 - - - - - - - - -
- - - - - - - - 2.67 2.69 -0.07 - - 2.39 - - - - -
1.39 2.06 -0.31 -3.71 -2.48 -2.77 -0.24 -1.35 0.75 2.07 -1.93 -4.14 1.45 -2.31 -2.41 -3.25 -2.38 -3.95 -3.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.