Heatmap: Cluster_27 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
- 2.79 2.23 -1.75 - -21.62 -25.09 -12.75 - 1.72 - - 1.93 - - -30.21 - - -
0.34 0.75 -0.72 0.96 -1.82 - - -1.95 0.42 -0.04 -1.23 - -0.05 -0.63 -0.6 1.08 0.94 1.57 -0.09
- 1.94 - 1.81 0.86 1.63 0.19 - - - 0.98 -1.45 -2.88 0.43 - - -0.29 -1.16 -0.98
- 2.38 - - 0.11 -0.0 - 1.4 - - - - 2.05 1.6 - - - 0.95 -
-1.32 1.66 1.41 0.31 - 0.24 2.11 -1.54 - 0.15 -1.63 - -3.77 0.19 -0.57 -0.24 -0.27 -0.52 -
0.62 -0.41 -0.69 0.74 - 1.42 -1.42 -2.81 -0.64 1.97 -2.06 - 0.94 -0.99 0.07 -1.23 0.14 0.12 -1.5
0.62 -0.41 -0.69 0.74 - 1.42 -1.42 -2.81 -0.64 1.97 -2.06 - 0.94 -0.99 0.07 -1.23 0.14 0.12 -1.5
- 3.32 - - 0.72 2.74 - - - - - - - -3.01 -1.91 - - -1.64 -
1.51 0.43 0.62 -0.28 0.79 1.18 0.19 0.0 0.2 -1.82 -1.07 -0.36 0.54 -1.03 -3.13 -1.4 -1.75 -0.8 -1.63
- 0.77 -0.63 1.21 - 0.81 -0.29 -0.49 -1.07 1.54 -1.57 -3.93 0.89 -0.7 0.74 -0.74 0.16 -0.98 -0.18
- 3.13 1.56 - -0.47 -0.99 -1.21 -2.52 -1.16 0.18 -4.23 - -2.76 -3.87 -4.37 -0.25 -2.15 -0.18 0.67
-1.25 2.53 - 2.08 -0.38 0.89 -0.76 0.18 -1.91 1.79 -4.4 - - -4.87 -2.35 - - -2.42 -
- - - - - - - - - - - - - - - - - - 4.25
- - - 2.15 0.98 3.3 - - - 0.52 - - - - - -1.18 -0.85 - -1.61
- 2.57 - 2.5 - - - - 1.02 1.99 - - - - - - - -0.23 -0.89
- 3.06 - - - - - - - - -0.6 - - -1.21 - 1.7 - 2.66 -
- 2.31 -0.15 - - -0.53 0.06 - - 2.7 - - - - 2.06 - -0.44 - -
2.3 1.04 2.3 0.31 -1.23 1.43 -29.04 -1.16 - - -1.7 -2.06 -4.65 -2.69 -1.02 -2.65 -3.33 -0.62 -2.56
- - - 2.8 - - - - 2.67 2.5 - - - - - - - - -
- 1.94 - 1.81 0.86 1.63 0.19 - - - 0.98 -1.45 -2.88 0.43 - - -0.29 -1.16 -0.98
2.12 3.65 - - - - -0.41 - - - - - 0.42 - - - - - -
- 1.53 0.98 1.14 - -0.55 -2.7 - -2.01 1.22 -3.08 -1.88 -2.41 0.31 0.58 -1.44 -0.12 1.05 0.89
-0.33 -0.77 0.65 - -0.2 -1.39 - -1.49 0.64 - -0.91 1.09 1.47 -3.41 -2.69 -0.76 - - 2.72
- 3.66 - - - - - - - 2.47 -1.67 - - -0.9 - - - - -
2.8 - - 3.59 - - - - - - - - - - - - - - -
- - 0.35 0.87 - 0.22 0.12 0.98 0.59 2.33 -0.26 -2.61 -1.32 -0.74 -0.59 -0.71 -0.59 -0.2 -1.67
- - - - - - - - - - 1.59 - - - - - - - 4.0
-0.96 1.66 0.56 0.7 -0.39 1.31 -0.47 0.76 0.23 -1.9 -2.15 - -3.38 -1.29 -0.29 0.11 -0.26 0.35 -1.36
- 4.25 - - - - - - - - - - - - - - - - -
0.91 2.63 - - - 1.66 - - 0.95 1.82 -2.24 - - -0.53 -2.62 -1.12 -1.86 -1.01 -
- - - 3.03 - - - - - - - 1.45 - - 2.1 0.42 0.27 0.37 -
1.11 2.21 -1.6 - 1.79 - - - -0.04 - - -0.03 - - -0.43 0.95 -1.31 1.76 -
- 2.53 0.07 -1.04 -0.04 2.38 - -0.44 0.57 1.12 - - - - 0.2 - - - -
- - - 4.18 - - - - - - -0.26 - - - - - - - -
- - - - - - - - - -0.71 0.11 -0.63 - 0.42 -0.07 0.56 2.51 - 2.85
- - - - - - - - - - - - - 3.24 - - - - 3.25
- 4.1 - - - - - - - - - - - - - - - 0.93 -
1.43 0.59 1.5 0.55 0.68 1.22 -0.24 -2.96 1.17 -2.37 -1.57 -2.3 -0.46 -2.19 -2.01 -1.01 -1.95 -1.34 -1.86
- 2.9 0.7 0.95 - - - - 0.59 -0.31 -1.59 - -0.44 -0.72 - 0.41 0.24 -0.03 -1.05
- 2.14 0.7 0.65 0.82 -0.46 - - 0.07 0.91 -2.41 - -0.75 -0.3 -1.95 -0.21 1.35 -1.99 -1.17
- - - 4.25 - - - - - - - - - - - - - - -
-0.83 0.47 0.19 -0.69 -0.14 0.24 -0.45 0.49 -0.79 1.22 0.27 -3.9 1.01 -0.79 -0.2 -0.31 0.05 -0.03 -0.77
- - 1.5 2.32 - 1.12 - - 0.7 2.63 - - - -1.14 - -0.45 - - -
- - - - - - - - - - - - - - - - - - 4.25
- 2.0 -1.12 - - - - - - 2.99 -2.43 - - -2.59 -1.41 -0.19 0.54 1.66 -1.35
- 2.26 - 0.77 - - - - 2.38 -0.72 0.39 - -2.98 -1.03 -0.54 -2.34 -0.5 -0.83 1.36
- - - 3.95 - - - - - - - - - - - - - 1.84 -
2.59 - -2.24 2.8 1.83 1.18 - - - - - - - - - - - - -
-1.23 1.45 -4.74 1.88 0.38 1.86 - - 0.78 - -1.77 - - -0.03 1.34 -1.0 -1.87 -0.55 -2.17
- 2.49 2.62 -0.17 - -0.35 0.93 - - 1.62 - - - -0.82 - - - - -
- - - - - - - - - - - - - - - - - - 4.25
-0.45 2.51 - - -2.18 1.64 -1.9 -2.05 -0.59 - -0.74 -2.59 -0.13 0.06 -0.75 0.67 -0.71 0.8 -0.32
2.21 3.37 - - - - - - 1.39 - -0.62 - - -1.76 - -2.12 - -2.12 -
- -0.91 1.05 2.25 0.92 - - - - -0.63 - 0.93 - -2.48 2.16 - 0.08 0.56 -
- - - - - - - - - - - - - - - - - - 4.25
- 3.22 - - - - 1.36 - - - - - - -0.43 - 2.67 - - -
- 2.53 0.4 - - - - 0.63 - 1.88 -0.14 -0.96 -0.18 0.59 - 0.47 - - 0.57
- - - 4.25 - - - - - - - - - - - - - - -
1.81 1.96 -3.38 - 0.32 -1.41 -0.35 0.06 0.56 1.16 -0.53 0.32 -0.65 -1.16 -4.07 -2.35 -1.52 -1.25 -1.76
- -0.68 0.32 0.84 -0.55 0.4 -1.48 - -2.61 -0.45 -0.19 -0.24 -0.08 0.09 -0.71 0.0 1.45 0.09 1.55
- - - 3.52 - - - - - - - - - - 1.63 - 2.14 - -
- - - 4.02 - - - - - - - - - - - - 0.86 -0.07 -
0.84 - 2.04 -0.9 -0.57 2.07 0.6 - - - -1.03 -1.45 1.59 -0.37 - -2.73 -1.2 -0.91 -1.28
-23.14 2.34 -1.02 -22.53 -24.57 -23.46 -0.18 -22.73 -21.07 0.28 0.57 -27.25 -1.91 1.12 0.28 1.79 0.33 0.57 -
-23.14 2.34 -1.02 -22.53 -24.57 -23.46 -0.18 -22.73 -21.07 0.28 0.57 -27.25 -1.91 1.12 0.28 1.79 0.33 0.57 -
- - - - -0.11 - - - - 0.99 - -1.34 -0.08 -0.86 - - 0.62 - 3.66
- - - 2.54 - - - 0.69 1.3 1.1 - - - -0.2 0.54 -0.3 - 1.83 -2.03
- - - - - - - - - - 0.91 - 1.2 - - - 1.97 - 3.45
1.75 1.37 2.36 - - - 1.48 - - - 1.29 - - -1.15 - - 1.18 - -
- - - 1.72 - - - - - - 0.6 - -2.49 1.39 - 0.53 1.58 2.22 1.2
- 1.94 - 1.81 0.86 1.63 0.19 - - - 0.98 -1.45 -2.88 0.43 - - -0.29 -1.16 -0.98
- 3.2 - - - - - - - 2.25 - - - 0.58 - - - 1.83 -
- 0.32 - - - 1.43 -0.26 - - 2.63 - -1.13 2.58 - - 0.66 - - -
- - - - - - - - - - -0.24 - - 1.45 - 0.14 2.24 1.25 2.85
0.74 -1.17 0.42 -0.1 0.75 0.91 -0.02 -1.39 0.59 0.74 -1.81 -0.64 0.38 -0.47 -0.62 -0.23 -0.7 0.15 -1.59
0.12 1.51 -0.21 -1.76 1.22 1.24 0.59 -0.24 0.97 -0.12 -3.26 -3.79 -1.98 -2.07 -1.73 -0.32 -1.4 -0.24 -0.05
0.99 2.65 1.19 0.13 - 1.29 - -0.47 -4.63 -4.31 - - 1.91 -3.62 -3.0 - - - -2.86
-16.03 - - - - - - - - - - - - - - - - - 4.25
1.53 2.14 1.56 -0.97 - 1.38 -0.11 -0.29 -0.55 -1.01 -3.38 - 0.11 -2.25 - -1.06 -1.63 -0.95 -
-13.2 - - 2.71 - - - 1.48 - -9.8 - 0.58 -0.96 -1.28 0.64 0.78 -0.54 1.7 -
-0.17 1.47 0.22 0.26 -2.16 - -1.71 -2.14 0.05 - -0.9 - 1.61 0.47 -1.79 0.87 0.64 0.42 0.27
- 2.86 - - - 2.82 - -26.57 - - -0.51 - - 0.11 - -0.78 0.07 0.33 -
- 1.29 - 2.81 - - - - - - -0.55 - - 0.65 0.16 -0.55 0.23 1.08 1.13
0.85 2.55 1.42 0.54 -0.85 -0.36 - 0.44 -0.39 0.38 -2.04 - -1.48 -2.89 -1.86 -2.36 -1.45 -0.69 -1.92
- - - - - - - - - - - - - - - - - - 4.25
- - - 4.25 - - - - - - - - - - - - - - -
- - - - - - - - - - - - - 1.18 - - - 1.91 3.7
0.14 -0.23 -0.77 -2.29 0.77 1.15 -0.25 -1.97 1.23 2.11 -3.87 - 1.58 -2.55 -2.87 -1.3 -1.82 -1.58 -2.5
-0.25 -0.18 0.82 0.21 0.35 0.62 0.28 -0.18 0.44 0.62 -1.0 -2.32 0.08 -0.49 0.01 -0.28 0.15 0.05 -3.2
1.02 - - 2.97 - - - 0.36 1.29 1.39 - - -2.46 -1.23 -0.16 -3.13 - -0.06 -2.3
- 1.23 0.19 2.81 0.04 - - - - 2.15 - - - -0.07 - - -1.52 0.12 -0.65
- 2.47 -0.43 0.26 - 0.8 - - 1.7 - -2.17 - 1.11 0.38 - -1.0 -0.79 0.16 -0.67
- - - 3.46 - 2.85 - - - - - - - - - - - - -0.25
- 3.93 - - - - - - - - - - - - - - 1.89 - -
-5.49 -20.25 - 3.78 - -13.74 - 1.96 - - - - 0.41 - - - - - -
-1.43 0.65 0.45 -0.62 -0.65 -0.32 -2.48 -0.29 -1.35 1.47 -1.36 -0.67 2.03 -1.57 0.0 -0.01 -0.43 0.07 -2.14
0.08 0.37 -1.86 1.32 - 0.68 - - 1.98 -0.18 -0.95 - -2.89 -0.35 0.47 0.36 - -0.72 1.46
0.08 0.37 -1.86 1.32 - 0.68 - - 1.98 -0.18 -0.95 - -2.89 -0.35 0.47 0.36 - -0.72 1.46
- - - - - - - - - - - - - -1.26 1.8 - -0.94 2.46 3.18
-5.07 2.13 1.17 -0.69 1.15 1.55 -0.11 -0.33 -1.48 0.53 -1.92 - 0.15 -1.16 - -2.84 -0.66 -3.62 -1.44
-0.71 - - - -0.15 0.61 - - -1.74 -1.94 1.07 - -1.9 0.66 -0.54 -0.01 -0.92 0.33 3.0
- 3.54 - - - 2.16 - - 1.23 - - - - -0.94 - - - - -
1.94 3.0 -16.22 0.3 - - - - - 2.3 - - -0.82 -1.14 - - - - -
- - - 3.72 - - 1.23 - - - - - - -2.4 -0.02 - -0.44 0.69 -
- - - - - - - - - - 0.49 - 2.44 - - - 0.66 - 3.4
-0.01 - 2.35 -0.26 0.69 - - -1.18 - - -1.12 0.73 - -0.95 -1.33 -3.05 - -0.69 2.65
1.09 1.19 -0.31 0.86 0.81 1.09 -0.13 -2.74 -2.82 -1.84 -0.96 -5.32 -0.04 -0.11 -0.06 -0.24 -0.7 0.04 -0.53
- - 2.29 1.92 - 2.75 - - - - - - - - 1.47 - -0.3 - -
- - - 3.08 - - - - - - - - - 0.5 - - 3.19 - -
1.4 2.98 0.76 - - - -0.17 - - -0.05 0.57 - 0.37 1.11 - - - - -
- - 0.8 0.5 - 1.9 - 1.81 -0.27 0.46 -2.65 - 0.11 -2.45 -1.72 0.34 1.55 -1.36 -3.3
- 3.86 - - - - - - - - - - - - - - 0.17 1.76 -
2.55 3.17 - - - 1.92 - - - - - - - -1.41 - - - - -
- 1.38 - 2.72 0.51 -0.5 - -1.18 - - - 2.36 - -1.67 -2.7 -0.57 -0.06 - -
- - - 2.75 - 3.13 - - - - - - - -0.52 - - 1.49 - -
0.39 0.09 - 1.83 0.14 1.68 0.72 0.39 -1.06 -0.42 0.4 0.14 - -1.97 -1.79 -2.4 0.36 -2.72 -
1.36 2.17 2.0 0.63 -1.47 1.26 - - - - - - - -0.21 -1.81 -1.32 0.27 -0.46 -2.81
- - - 3.36 - - - - - 2.58 - 1.29 - -1.58 - - - - -
- 3.2 - - - - - - - - - - - - - - - - 3.29
-0.09 1.45 - - -1.03 - -2.21 - - -1.34 -0.13 - 2.14 0.71 0.14 0.77 0.5 1.06 -0.04
- 0.39 0.25 1.88 - - - - 0.61 2.88 -1.86 - - -0.77 -0.54 -0.12 - 0.56 -
- - - - - - - - - - - - - - - - - - 4.25
- 2.53 - - - - - - - 2.02 - - - -0.94 0.72 -0.34 1.82 1.43 -
- 4.25 - - - - - - - - - - - - - - - - -
- 0.79 -1.21 1.74 -1.37 - -0.17 1.17 1.7 2.18 -3.77 - -0.53 -3.99 -0.61 -1.75 -4.62 -2.0 -3.0
- -2.22 0.85 0.83 1.14 0.35 0.41 -2.83 -0.44 -1.32 -1.49 -0.87 -2.66 -0.36 - 0.04 -0.24 -0.16 2.17
- - 1.5 1.54 - 1.92 - 2.28 - - 0.37 - - 0.97 -1.12 -0.16 - - -
- - - 4.25 - - - - - - - - - - - - - - -
- 1.23 - 1.96 - - 0.36 -1.41 -0.19 2.73 -3.62 - -2.59 -0.1 - -0.43 -0.13 -1.24 -1.63
1.36 1.23 1.65 - - 1.74 0.05 -0.61 -5.34 -2.1 -2.34 - -0.31 -1.34 -0.77 0.52 -0.54 0.43 -2.46
- 3.94 - - - - - - - - - - - 1.35 - - - 0.09 -
1.56 0.85 0.15 -0.04 1.07 0.48 - -1.36 -3.48 -3.41 -1.4 0.05 0.29 -0.24 0.23 -0.29 -0.07 0.5 -1.97
- 3.4 - - - 1.41 - 1.49 - - - - - - - -0.37 -0.4 - 0.57
- 2.74 - 1.75 0.72 1.6 - 1.62 - - - - - -0.54 - - - - -0.95
- 2.88 - - 0.87 1.07 - - - -0.2 -0.73 -1.26 -2.4 -1.14 - -0.43 0.11 1.75 -
- - - 4.25 - - - - - - - - - - - - - - -
0.75 - - 2.71 -1.06 0.26 1.78 0.54 -0.29 0.74 - -2.87 -1.55 -3.57 - - -0.6 -0.96 -
-1.07 0.92 - -0.41 - 0.48 - - -0.83 1.48 0.13 - 1.83 1.05 -1.59 0.06 0.69 0.05 -1.33
-1.11 0.07 0.14 0.25 -1.74 0.28 -0.14 - - - 0.37 0.02 - -0.54 -2.84 - 0.1 -1.47 3.04
-3.57 - -1.45 -2.85 -4.51 - -0.71 -1.52 -0.09 -0.35 0.53 -0.7 -1.12 1.13 -2.14 0.19 1.64 1.09 2.13
- -0.13 - 0.83 - - - - - - -0.01 -1.9 -2.52 0.29 0.22 -0.59 -1.22 0.69 3.29
- 3.37 - - - - - - - 2.21 - - - -0.46 - 1.12 - 0.15 -
- - - - - - - - - - - - - - - - - - 4.25
- 3.54 - - - 2.16 - - 1.23 - - - - -0.94 - - - - -
- 2.6 - 2.06 - - - - 0.33 - 0.29 - 0.25 -1.31 0.4 0.26 -1.78 0.23 -0.47
- - - 2.33 - - - - - - 0.18 - - 1.97 0.06 0.93 2.04 0.88 -
- - - 2.33 - - - - - - 0.18 - - 1.97 0.06 0.93 2.04 0.88 -
0.97 - - 1.5 - -0.25 - - - -2.11 - 1.86 0.65 -1.63 1.3 -23.63 - -20.65 2.36
- - - - - - - 1.84 - - - - - - - - - - 3.95
- -0.27 0.29 1.94 -1.73 - -0.74 -0.14 -1.11 - -1.86 0.04 0.72 0.58 1.04 - -1.19 - 1.97
- - - - - - - - - - - - - - - - - - 4.25
- 1.94 - 1.81 0.86 1.63 0.19 - - - 0.98 -1.45 -2.88 0.43 - - -0.29 -1.16 -0.98
- - - 4.25 - - - - - - - - - - - - - - -
- - - 4.04 - - - - - - 1.33 - - - - - - - -
-1.4 1.14 0.34 0.84 - -2.92 0.06 0.77 0.01 -2.17 0.22 -1.21 -0.93 0.66 -1.18 0.94 0.92 0.06 -2.02
- 1.96 - 1.38 - 0.08 0.09 - - -0.7 -1.94 - 0.1 0.21 1.32 0.42 0.28 -0.41 0.56
0.28 -1.52 -1.65 0.56 - -0.83 - - -0.89 - -0.2 -2.39 0.74 -0.03 0.6 0.97 0.06 0.99 2.11
-1.07 0.65 -2.01 0.73 0.61 - 0.02 0.54 1.23 2.41 -1.98 - -0.5 -1.52 -2.46 -1.26 -0.64 -0.82 -1.79
- 2.11 - 1.98 1.03 1.79 0.36 - - - 0.15 -1.28 -2.71 -0.35 - - -0.13 - -0.82
- - - 3.85 1.51 - - - - - - - - - - - - - 0.8
0.51 2.1 1.99 - 0.69 2.7 - -0.78 - -2.09 -4.32 - - -1.59 - - - - -
- 3.97 - - - - - - - - - 1.74 - - - - - - -
0.64 2.63 -1.35 - - - - - 0.13 0.44 -2.67 - 1.5 -0.35 0.58 0.69 - -0.4 -0.4
- - - - - - - - 2.87 - - - - 2.62 - - - - 2.47
0.73 2.57 - 2.07 - - - - - 2.29 -2.19 - - -0.54 - - - 0.51 -
- - - - - - - - - - - - - - - - 1.87 - 3.94
- - - 4.12 - - - - - - 0.7 - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.25
0.93 0.89 0.34 -0.28 0.41 1.61 0.25 -0.67 -0.68 1.22 -2.92 -5.32 1.11 -1.21 -2.7 -3.09 -1.78 -0.99 -2.46
-1.97 -2.78 0.65 2.01 - 0.61 -0.9 0.28 0.32 2.19 -2.39 -0.41 -2.1 -1.67 - -1.9 -2.21 0.91 -4.32
1.35 3.59 - 1.04 - -2.35 - 0.25 - -0.43 - - - - - -3.15 - - -2.81
2.44 1.12 -1.55 0.3 0.89 1.61 - - -0.0 - -2.43 -2.99 1.29 -4.25 -1.31 -2.93 -2.17 -1.82 -3.58
- - - - - - - - - - - - - - - - - - 4.25
- - - - - - - - - - - - - - - - - - 4.25
- 3.11 - - - - - - - - 2.4 - - - - - - 0.75 1.77
- - - - - - - - - - 0.9 0.89 - 0.61 -0.11 1.97 1.24 1.25 2.07
0.76 - - - - - 0.95 - - 1.07 - 1.49 - - - - - - 3.39
- 2.05 1.45 0.89 1.37 0.77 0.78 -0.13 -1.11 1.25 -2.19 - - - - - -1.66 - -
- - - - - - - - - - 0.8 -0.26 - 1.68 - 1.58 -0.76 1.57 2.73
- - - - - - - - - 0.22 1.26 - - 0.66 - 1.2 2.04 - 2.9

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.