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Heatmap: Cluster_17 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
- 3.82 - - - - - - - - - - - 1.36 1.21 - - - -
- 3.54 - - - 2.15 - 0.38 - - - - -1.53 -0.38 - - -2.57 - -1.53
- 3.47 - - - - - - - 2.01 - - - - - - - 1.96 -
-0.99 2.37 -0.38 1.35 0.98 0.72 -0.91 -1.92 -0.33 0.32 -3.04 - -2.29 -0.69 0.0 -0.38 -1.66 -0.92 -
- 2.95 - 0.91 - - -1.61 -0.12 -0.43 -0.36 -0.94 - -1.11 0.11 0.48 -2.25 -0.22 0.88 -1.84
- 2.44 - - - - - - - - -0.38 -0.19 - 0.81 1.38 1.83 1.45 0.31 -4.25
- 4.05 - - - - - - - - - - - -1.27 -1.0 - -0.27 -0.8 -3.33
- 3.63 - - 2.34 - - - - - - - - -2.86 - -1.34 - 0.08 -
- 3.59 - - - 2.8 - - - - - - - - - - - - -
- 1.59 - - - - -1.06 - 2.56 3.0 - -0.54 - - -1.06 - -1.16 - -
- 3.07 - - - - - - - - -0.83 - - -0.23 - 0.51 0.85 2.41 -0.58
- 3.8 - - - - - - - - - - 0.45 1.04 - - -0.38 - -0.26
- 3.48 - - - - - - - 1.35 -0.42 - - - - - - -0.18 1.86
- 2.73 - - - - - 0.04 1.62 2.92 - - - - - -0.83 -2.87 - -
- 4.25 - - - - - - - - - - - - - - - - -
- 3.06 2.23 - 0.35 - 0.14 - 0.17 0.19 - - - - - - -0.41 -0.8 -
- 3.16 - - - - - - - - - - - - - 2.38 2.28 - -
- 4.25 - - - - - - - - - - - - - - - - -
- 4.25 - - - - - - - - - - - - - - - - -
- 2.87 - - - - 2.12 - - - - - - 1.47 0.36 0.22 -0.08 0.22 -
- 4.13 - - - - - - 0.55 - - - - - - - - - -
- 2.87 - - - 1.46 0.81 - -0.16 0.81 - - - -1.32 0.92 - - 1.18 -
- 2.89 - - - - 0.32 - - 3.37 - - - - - - - - -
- 3.62 - - - - 1.7 - - 1.8 - - - - - - - - -
- 3.8 - - - - - - - - 1.64 0.95 - - - - - - -
- 3.78 - - 1.74 0.92 - - - - - - - - - - - - -
- 3.51 - - - 2.59 - - - - -2.09 - - - - - - - 0.39
- 3.95 - - - -0.33 - - - - - - - - - 1.44 - - -
- 3.62 - - - 1.67 - - - - -1.77 - - - 0.96 - - 0.39 -
- 3.47 2.95 - - -25.16 - - - -2.29 - - - - - - - - -
- 3.93 - - - - - - - - - - - - - - - 1.9 -
- 3.93 - - - - - - - - - - - - - - - 1.9 -
- 4.25 - - - - - - - - - - - - - - - - -
- 1.96 - -0.19 -0.25 1.33 - - 0.46 1.37 -0.02 - - 0.94 0.22 0.53 -0.34 -1.75 -1.61
- 3.09 2.97 - -1.02 - -0.78 -0.68 - - - -1.6 - -2.7 - - -1.7 -2.61 -
- 3.36 - 0.4 - - - - - 2.07 - - - - - -1.02 1.23 - -1.28
- 3.2 - 0.26 - - 1.46 0.83 - - -1.94 - 1.63 -2.48 - -1.67 -2.15 - -
-0.39 2.04 2.16 -0.19 -1.67 1.28 0.33 - 0.62 -1.58 -2.11 - -2.5 -0.17 -0.96 -2.94 -2.44 -1.19 -1.55
- 2.72 - - - - 2.24 - 1.27 1.08 -3.92 - - - - -0.48 - 1.24 -
- 3.68 - - - 1.37 - - - - - - - - - -0.03 1.41 - -
- 2.49 2.93 0.17 - 1.86 - - - - - - - - - - - 0.0 -
- 2.77 - 0.31 - - - - - - 0.65 - - 0.6 1.41 0.96 0.12 -0.9 0.71
1.35 2.0 2.92 1.93 - -0.32 - - - - - - - - - -1.87 - - -
0.79 3.55 - -1.15 0.89 - - -0.81 -0.3 -0.5 - - - - - -1.17 -1.21 -1.64 -
- 4.25 - - - - - - - - - - - - - - - - -
- 3.83 - - - - - - 0.92 - -1.65 - 1.35 - - - - - -
-0.01 3.22 - - - -0.64 -0.43 - - - -1.27 - -1.98 0.63 0.98 -0.45 -1.07 0.92 -7.1
1.88 3.65 0.77 -1.11 - - - -2.36 -1.71 - - - -3.21 - - - - - -
- 4.12 - - - - - - - - - - - - - - 0.69 - -
- 3.72 - - - - - - - - - - - 0.82 - - 1.0 1.07 -
- 3.09 2.97 - -1.02 - -0.78 -0.68 - - - -1.6 - -2.7 - - -1.7 -2.61 -
- 3.78 - - - 0.61 0.79 0.8 - - - - - -1.92 - - - - -
- 4.25 - - - - - - - - - - - - - - - - -
- 2.58 2.16 - - - 0.46 - - 1.56 - - - 0.46 0.26 - -0.74 -1.46 -0.57
- 4.03 - - - - - - - - - - - 1.41 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.