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Heatmap: Cluster_360 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
1.13 2.28 0.91 0.75 1.11 0.21 0.16 0.15 0.03 0.58 0.04 20.75 7.6 0.72 0.42 0.35 0.26 0.56 0.48 1.72 0.23 1.25 1.87 0.43 0.0 0.44 0.0 1.34 0.28 0.01 1.17 0.16 0.42 0.11 1.64 1.32 0.0 0.56 0.05 0.0 0.0 0.16 0.54 0.82 0.72 0.0 0.0 0.25
51.91 37.32 37.99 41.06 29.28 16.44 38.37 36.34 45.97 66.53 44.34 265.52 28.05 39.94 36.52 24.08 37.94 27.07 61.88 54.35 27.81 31.53 33.58 24.71 17.34 22.4 53.98 73.75 121.31 22.96 36.57 22.26 16.47 21.97 34.95 26.29 35.7 29.52 29.98 36.31 15.01 27.79 24.59 23.47 22.46 28.62 58.19 14.75
0.06 0.07 0.12 0.14 0.65 2.3 0.24 5.15 5.53 2.08 4.0 60.14 5.22 0.34 0.73 0.09 0.03 0.17 1.5 0.11 0.24 0.32 0.08 2.14 0.26 1.37 1.05 0.23 24.0 0.26 0.6 0.35 0.31 0.01 0.01 0.15 0.97 0.45 0.05 0.0 0.0 0.81 0.42 1.65 0.0 0.0 0.0 1.36
0.01 0.18 0.0 0.2 0.43 1.29 1.22 3.36 3.04 1.9 2.37 13.1 4.55 0.06 0.3 0.04 0.02 0.26 2.27 0.06 0.0 0.21 0.18 0.11 0.08 0.02 0.04 0.02 2.82 0.14 0.33 0.06 0.09 0.14 0.01 0.43 0.12 0.24 0.03 0.0 0.0 0.21 0.11 0.11 1.81 0.0 0.0 0.01

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)