Heatmap: Cluster_28 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Diurnal Dark 2h
Diurnal Dark 6h
Diurnal Light 2h
Diurnal Light 6h
Diurnal Light 10h
Diurnal Light 14h
20°C Liquid
4°C Liquid
20°C Desiccation
4°C Desiccation
20°C plate
CadmiumCl 250 µM, 24h
Dark, 24h
HL (900 µmol photons m-2 s-1, 1 h)
Cold (4°C )+ HL: 900 µmol photons m-2 s-1, 1h
Mannitol 300 mM,24h
NaCl 150 mM, 24h
UV (exactly 385 nm, 1400 µW/cm2, 1h)
pH = 9, 24h
- -0.58 - - 1.3 1.99 - 0.84 2.2 - 1.05 0.47 - - -1.27 - -1.69 -0.14 -1.28
- - - - -1.17 -0.26 0.14 - 1.49 - 1.08 - - 1.18 1.02 0.91 0.1 1.62 0.48
- - - - - - 1.76 - 2.86 0.72 -1.47 - -1.54 1.66 - -1.17 - 0.21 0.36
2.1 - - - - - - - 3.57 - - - - -0.28 - - - 1.02 -
-0.21 0.4 -1.79 0.43 -0.32 0.22 -3.28 - -2.99 - -0.31 0.74 -0.75 1.05 0.8 0.77 0.75 0.88 -0.19
2.33 - - - -30.72 - - - - - 0.37 - -9.71 0.72 -0.72 1.36 -0.77 2.74 -0.71
- - - - - - - - 3.53 - - - - 2.9 - - - - -
- 0.81 - - - - - -1.99 1.36 -0.81 -0.13 - - 0.59 -1.26 1.9 0.82 1.8 1.02
- - - - - 3.29 - - - - - - - -0.58 - - - 3.1 -
- - - - - - - - 3.63 1.18 - - - - - - - - 2.11
- - - - - - - - 4.25 - - - - - - - - - -
1.33 0.6 -14.33 0.93 1.74 -0.13 - 0.97 - - - 0.71 -1.92 -33.68 0.54 -3.71 -0.45 1.34 -2.59
- 2.27 - - - - 2.51 - 2.54 - - - - - - 0.38 0.43 - -
- - - - - 2.77 - - 3.3 - - - - - - - 1.22 - -
-2.65 0.53 0.12 -0.99 -0.47 0.54 -1.84 -1.29 -3.4 -0.31 -0.56 -0.83 0.43 0.5 0.93 0.79 0.94 1.11 -1.64
- - - - - - - - 3.83 - - - - - - - - 2.25 -
- - - - - - - 3.11 3.37 - - - - - - - - - -
- - - - - - - - - - 1.92 - 2.7 1.67 - 0.6 0.44 1.4 -
- - -0.12 - - -2.28 1.03 -0.09 2.36 0.08 0.16 -0.98 - 0.24 -0.19 0.07 0.83 0.99 -2.35
- - - - - - - - 4.25 - - - - - - - - - -
-0.93 - -1.9 0.36 0.69 -0.31 -0.96 - -3.07 -2.15 -2.01 1.75 - 1.72 -0.63 0.73 0.33 1.35 -0.71
0.49 - -1.08 0.19 -1.17 1.95 -1.45 0.76 0.66 -1.15 - - -2.23 -0.2 -2.95 -0.06 -1.97 1.68 0.96
- - - - - - - - 3.93 - - - - 1.93 - - - - -
1.42 -0.91 0.67 -2.12 0.47 0.72 -0.7 -1.44 -0.61 -1.15 0.95 - -2.24 0.03 -1.14 -0.19 -0.97 1.52 -0.03
- - - - - - - - 2.84 - 2.0 - - -0.37 - 0.81 0.46 1.66 -0.38
- - - - - - - - 4.25 - - - - - - - - - -
- - - - - - - - 4.25 - - - - - - - - - -
1.84 0.54 -0.37 0.03 0.12 - 1.11 1.93 0.12 - - -2.89 -0.73 -0.57 - -0.94 -1.1 0.51 -2.41
2.85 - - - - - - - 3.18 1.45 - - - - - - - - -
- - - - - - - - 3.68 - - - - 1.0 - - - 2.08 -
-0.86 0.61 0.05 -0.94 -1.48 -1.1 - - -0.36 -3.56 -0.75 1.42 -5.52 1.53 -0.63 0.58 0.63 0.87 0.99
-0.11 -1.27 -1.78 0.33 -0.13 2.17 -0.1 -2.45 0.4 - -0.81 -0.78 0.02 -1.37 0.83 -0.79 -0.2 1.3 -
- - - - - 1.64 - 2.08 2.28 - - - - 2.19 - - - 0.24 0.07
- - - - - - - - 3.55 - - - - - - - 1.36 2.24 -
- - - - - - - - 2.49 - - - 0.21 0.63 - 1.87 1.33 2.17 -
- - - - - - - 0.69 2.41 - 2.01 - 3.01 - - - - - -
-4.31 -2.5 -2.62 -1.87 - 1.83 -3.16 - - -0.97 -0.71 - -0.88 0.8 -0.65 1.09 1.15 1.76 1.54
- - - - - 1.07 1.96 - 2.0 - -0.71 - 1.75 - - - 1.29 1.35 -
- - - 0.89 0.23 2.82 0.49 -25.33 -21.74 -2.51 - - - -2.65 - -0.5 -0.47 2.36 -0.71
0.8 0.16 -1.09 0.56 0.37 0.68 -1.0 -1.75 -0.67 -1.05 0.18 -0.86 -0.56 -0.15 -0.28 0.47 0.02 1.07 -0.3
- - - - - - - - 3.01 - 2.92 - - - - - 1.75 - -
- - - - - - - - 3.86 - - - - 1.5 - - - - 0.71
1.31 - -1.83 0.39 -0.26 1.12 0.28 -0.44 -0.57 0.48 -2.63 - -1.39 0.38 -1.87 0.53 0.08 0.99 0.37
-1.56 0.95 -0.56 -2.1 - 0.25 -1.25 0.08 1.15 -1.65 -0.94 -0.07 - 1.24 0.64 -0.67 -2.21 2.01 -1.53
- - - - - - - 3.35 3.13 - - - - - - - - - -
- - - - - - - - 2.87 -0.69 - - 0.9 0.57 1.56 1.41 - 1.09 -
0.07 1.92 - - 0.68 -0.37 1.06 - 2.09 -0.06 - - - -2.6 -1.78 0.59 -2.25 1.13 -2.86
- - - - - - - - 3.53 - - - - 2.9 - - - - -
- - - - - - 1.0 1.39 3.31 - -1.73 - 1.05 - - 0.58 -1.31 - -2.07
- 0.88 - 1.33 -0.4 1.16 1.63 -0.87 1.87 0.42 - - -0.51 -2.24 - -1.17 0.12 - -0.77
- - - - - - - - 2.68 - 2.51 - - -0.01 - -0.33 1.91 0.44 -
- 0.98 - -0.28 1.07 1.35 0.66 0.02 -0.62 - -1.93 - - 0.21 0.73 0.72 -1.0 1.62 -
- 0.84 - - - - - 0.43 0.16 - 0.9 -0.19 -0.72 1.36 0.49 0.99 1.58 0.58 -0.09
- -2.02 - 1.15 0.86 1.13 0.53 - 1.26 0.63 -2.45 - - -0.89 -0.81 -0.48 -1.93 1.02 1.51
- - - 1.78 1.79 2.21 - - 2.59 - - - - -2.79 - - - 0.37 -
-12.83 1.42 -13.17 - -14.47 -16.88 0.24 -1.2 0.78 -0.4 -0.65 -1.9 -0.03 0.31 1.43 -0.04 -0.12 2.15 -3.8
- - - - - - - - 3.6 - - - 2.78 - - - - - -
1.62 - - - - - - - 2.48 - 1.02 -29.82 - 0.13 -0.95 - 2.07 1.33 -
-0.84 0.43 -0.04 -0.64 0.75 0.63 -0.33 -0.8 0.1 -0.35 -0.5 -2.35 0.86 -0.55 0.05 0.15 0.07 0.97 -1.12
- - - - - - - - 4.25 - - - - - - - - - -
-0.19 - - 1.12 - 2.47 - -0.39 - - - - - -0.08 - 0.07 0.38 1.52 1.8
- - - - - - - - 3.45 - - - - - - 3.01 - - -
- - - - - - - - 2.3 - 1.88 - - 2.28 - - - 2.47 -
2.01 - - - - - - - - 1.38 -0.36 - -1.13 1.91 -0.87 -0.46 0.91 1.92 -1.07
- - - - - - - - 4.18 - - -0.23 - - - - - - -
-0.04 - - - - - - - 1.51 - -0.8 0.3 -1.44 0.69 -0.44 0.98 1.62 1.98 0.73
- - - - - - - - 3.7 - 1.92 - - - - 1.17 - - -
1.23 -13.33 0.22 -1.04 -29.27 0.51 0.48 -0.81 -0.25 -1.36 -0.49 0.41 0.21 -0.01 -1.93 1.08 0.29 1.01 -0.75
-0.49 - - 0.3 - 1.17 - -0.01 - - 1.46 - - 1.89 - -5.65 1.6 2.11 -
-0.66 -1.01 - - - -1.69 - 0.66 2.52 - -0.32 2.21 1.9 -1.84 -5.89 -5.76 -0.4 - -
-0.72 0.16 -3.73 -0.72 0.52 2.11 -1.8 -1.09 0.02 -1.15 0.18 0.42 -1.47 -0.13 -0.27 -0.18 -0.94 1.3 -2.51
- -0.28 - -2.33 - -0.02 -0.44 0.81 0.08 -2.78 0.52 0.12 -0.62 0.72 1.26 0.56 -0.28 1.53 -0.18
- - - - - 1.59 - 1.07 - - 0.62 - - 1.25 - 0.12 -1.1 1.97 2.17
- - - - - - - 2.93 3.51 - - - - - - - - - -
- - - - - 2.65 - - 2.86 - - - - - - - - 2.45 -
- - - - - - 2.16 -0.39 2.7 1.62 - - - - - - 2.07 - -
- - - - - - 3.09 - 3.29 - - - - - - - -0.56 - -
- -0.17 - - 1.35 1.29 -1.16 -0.33 -0.73 -0.48 -1.31 -1.01 0.05 -0.32 1.05 0.7 -0.12 1.17 -0.06
- - - - - - - - - - 2.41 0.48 2.76 1.25 -0.47 0.42 - 0.09 -
- 1.43 - - -0.67 -0.03 -1.65 - - - -0.24 0.94 -2.43 1.98 0.95 0.74 -0.14 1.27 -0.88
2.33 - - - - - 1.05 - - - 1.07 - 1.04 -0.35 0.36 0.53 -0.06 1.38 -0.56
- - - - - - - - 1.27 - 1.75 - - -0.52 - -0.82 2.78 1.75 0.79
- - - - - - - - 3.77 - - - - - - - 1.22 - 1.59
- 0.81 - - - - - - 3.05 - - - - 0.89 - 1.88 - 1.53 -0.89
2.15 - - - 2.62 - - -1.35 - - -2.9 - - -0.9 - -1.92 -0.7 2.66 -2.92
- - - - - - - - 4.25 - - - - - - - - - -
- - - - - - - - 4.25 - - - - - - - - - -
- - - - - - - 1.76 2.31 - - 1.47 - -0.89 -0.22 1.83 -2.74 1.48 -
- - - - - - - - 1.68 - 0.39 -0.1 - - 0.78 2.45 0.91 0.42 1.66
- - - - - - - - 4.1 - - - - 0.85 - - - - -
2.11 - 1.92 - - - - 1.01 - - -1.26 - - 0.81 -1.71 -0.73 - 2.34 -0.44
- - - - - - 1.72 - 2.88 - - 0.06 - -0.2 - - 2.22 - 0.8
- - - - - - - - 4.25 - - - - - - - - - -
- - -5.45 - 0.5 - - 1.21 2.5 0.22 1.04 0.08 -2.21 -1.57 -1.44 -0.81 0.58 0.19 0.27
- - - - - - - - 3.09 - 0.4 - - -0.76 0.61 0.44 1.14 1.21 0.22
- - - - - - - - 4.25 - - - - - - - - - -
-1.98 0.54 - 0.58 -1.84 0.22 -1.62 -3.79 -0.89 -2.58 -1.35 1.15 -0.65 1.47 0.54 0.7 0.61 1.09 -0.98
- 0.72 - - - 1.35 -0.58 -1.89 -1.28 - -0.95 -3.2 -0.54 1.62 1.23 0.54 0.66 1.16 0.55
- - - - - - 2.47 - 2.5 - - - - - - - - 1.51 2.31
1.89 - - 1.31 - - 0.03 -1.11 2.41 1.28 - 0.68 0.55 - -4.52 -1.64 - -2.56 -
- - - - - - - - 4.25 - - - - - - - - - -
- - - - - - - - 4.25 - - - - - - - - - -
-0.08 - - -1.47 - - -0.08 - 3.05 0.9 -2.2 0.21 -0.4 -0.79 -0.81 -0.11 -0.37 -0.2 -0.42

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.