Heatmap: Cluster_120 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-0.3 -4.27 -0.4 -0.14 0.35 -1.11 -0.51 -5.67 -2.44 -5.44 -2.53 - 5.11 -4.77 -5.93 0.05 -7.08 -7.46 -4.56 -4.76 -7.13 -5.18 -5.93 -6.1 - -4.57 -2.97 - -0.76 -4.71 -2.5 -4.35 -2.36 -4.36 -6.46 -3.2 0.4 1.22 0.68 -6.81 - -3.01 -6.94 -6.33 -5.33 - - -
-1.64 0.27 -5.49 -5.12 -5.41 - - -5.51 - -6.67 - - -5.13 -0.53 0.98 1.65 -0.07 -1.57 0.33 1.73 0.07 2.79 2.93 0.84 -4.1 0.75 -1.7 -2.83 -1.37 -4.49 0.49 -1.7 -4.05 -6.9 -0.22 3.11 -4.19 1.24 -2.96 - -2.66 -1.36 -2.28 - -5.67 - - -3.03
0.24 1.47 0.86 1.09 0.2 -1.52 0.53 -0.61 -3.99 - -3.7 -0.32 -0.38 1.17 - -1.1 -1.79 -1.39 -3.51 1.53 -3.79 -0.19 -0.8 -1.98 - -3.13 - -0.73 -5.04 -2.64 -0.14 -1.66 -0.84 0.19 -0.95 -2.07 -3.83 -0.08 -0.26 - - 4.14 0.24 -2.99 0.24 - - -2.74
2.44 -3.04 -0.42 1.65 0.9 1.25 0.7 -0.38 -0.94 -1.57 0.29 -1.4 2.03 1.14 - -0.28 -3.25 - -1.03 -2.6 - - - -3.12 -1.95 -4.26 0.78 -1.06 -2.45 -1.79 -5.7 -2.86 -4.27 -1.75 -5.15 -1.17 -0.2 -1.58 0.99 0.2 2.74 -0.59 -1.52 1.66 0.08 -0.75 -4.55 -0.67
1.72 -5.83 - 1.78 2.16 3.34 3.32 0.51 - -0.76 -2.37 - - - - -1.06 - - -2.43 -5.6 - - - -4.25 - -4.46 - - -1.25 - - - - - - - -1.49 0.83 3.45 - - - - - -2.23 - - -
- -9.7 - - - - - -5.39 - - - - -3.7 -7.31 - 0.37 - - -4.29 -9.53 - - - -11.36 -3.6 - -0.13 - -1.94 -7.63 - -6.52 -1.13 1.28 -8.54 - -6.02 1.69 2.25 - - 4.91 -0.91 - 1.92 - - -
-0.76 -0.33 - - - - - -4.94 -4.77 -2.79 -4.45 - - 1.79 -3.33 -2.84 - -4.72 0.64 -1.54 -1.53 -2.7 -0.37 -1.86 -2.46 -2.01 1.32 - 2.68 - -1.13 -2.66 0.86 0.71 -1.46 0.18 0.44 2.23 1.87 - - 0.6 -1.74 -1.41 -1.73 3.15 1.59 -2.51
- 0.09 - - 4.18 - - - - - - - 4.05 - - - - - - - - - - -0.58 - - 2.84 - -22.42 0.7 -0.52 - - - - - - - 0.54 - - - - - - - -0.49 -
0.21 -2.78 0.11 0.35 0.0 - 1.04 -1.86 -1.21 -3.69 - -0.92 - -0.62 - -3.11 - - -2.28 -3.63 - - - -4.2 - -2.71 -0.29 - 5.14 - -2.59 - -4.36 -3.95 -3.25 - -0.72 -3.28 -2.62 -0.83 -0.96 - - - - - -2.93 -2.26
0.21 -2.78 0.11 0.35 0.0 - 1.04 -1.86 -1.21 -3.69 - -0.92 - -0.62 - -3.11 - - -2.28 -3.63 - - - -4.2 - -2.71 -0.29 - 5.14 - -2.59 - -4.36 -3.95 -3.25 - -0.72 -3.28 -2.62 -0.83 -0.96 - - - - - -2.93 -2.26
0.21 -2.78 0.11 0.35 0.0 - 1.04 -1.86 -1.21 -3.69 - -0.92 - -0.62 - -3.11 - - -2.28 -3.63 - - - -4.2 - -2.71 -0.29 - 5.14 - -2.59 - -4.36 -3.95 -3.25 - -0.72 -3.28 -2.62 -0.83 -0.96 - - - - - -2.93 -2.26
- 3.11 - 1.38 - - - - - 0.17 - - - 1.28 - - - 1.23 - -1.31 - 1.28 - -0.76 - - - - 0.14 -0.2 -0.72 - 0.87 1.46 - - 1.51 3.17 0.89 - - - - 2.29 - - 0.75 -
-6.83 -7.93 - - - - - -4.95 -4.81 - -3.53 -7.4 -3.39 - -4.37 -3.19 -1.4 -0.98 -5.27 -6.93 -5.56 -5.87 - -9.36 - -7.58 - - - - - 1.13 -0.95 0.08 - - - -2.22 -3.68 - - 4.87 3.02 - 2.34 - - -2.19
3.27 - - - - - - - - - - - - 0.27 - -3.72 - - -0.6 -4.99 - - - -7.23 -3.11 - - - - - - 0.36 -1.62 -0.79 -2.67 - - -1.37 -3.98 - -2.28 3.95 1.28 - 3.14 - -1.65 2.64
- -4.28 - - - - - - -3.65 -3.63 - - - - -2.21 -4.2 -3.36 - -5.22 -6.06 - - - -8.8 - - - - - - - 0.44 -0.41 0.62 -3.27 - - -4.98 -5.13 - - 4.27 0.13 - 4.53 - -8.44 -2.78
- -2.42 0.2 -4.66 0.97 -4.04 - - - - - - - -2.63 1.62 2.89 -4.73 - -2.59 -2.47 -3.2 -3.17 -4.68 1.82 -3.99 3.16 -0.79 -4.54 -4.04 - -5.49 -3.6 1.42 -2.75 -4.99 -0.96 -3.53 1.96 3.63 -4.62 -3.48 - - - -3.57 - - -
3.1 -5.68 2.63 1.96 3.83 2.11 2.1 - -2.35 -3.64 - - -2.57 -5.77 -3.23 -2.91 - - -0.93 -4.94 - - - -4.26 - -3.03 -4.43 -4.18 - - - -5.99 -5.02 -4.54 -8.0 - -4.47 -1.18 2.11 -3.26 - - - - - - - -
- -3.57 - - - - - - - - - - - - 0.88 2.15 - - - - - - - 0.16 - - - - 2.4 -0.37 - 0.47 1.67 -0.84 - - - 3.74 3.99 - - - - - - - - -
- 0.54 - -3.12 - - -4.51 - - - - - - -4.44 -3.08 3.18 -4.23 - -1.21 -7.23 - - -2.57 -4.93 -3.92 -2.99 0.53 - -1.1 - - - 1.2 -6.92 -5.45 -1.44 0.34 2.85 4.53 - - - - - - - - -
0.31 -2.94 -0.35 -1.48 0.63 1.46 -0.73 -0.1 -1.01 -2.31 -2.41 -8.35 0.69 0.22 -2.63 -0.66 -3.77 -2.42 -0.31 -2.36 -1.76 -1.55 -1.14 -1.52 -0.3 -1.83 1.58 -6.53 -4.55 0.15 -2.86 -0.88 -2.0 -0.58 -0.98 0.8 2.56 0.73 1.17 -2.45 -3.38 3.0 -1.04 -1.07 -0.8 -0.12 1.41 -2.36
-6.01 -3.49 - -0.89 - - -3.28 - - - - - - -1.3 2.91 2.6 0.55 -3.37 -2.17 -3.83 - - -2.93 -2.97 -0.1 -4.01 4.28 - -0.34 - -4.34 -3.84 -2.13 -3.52 -4.97 - -2.8 -4.75 2.27 1.3 -0.98 -1.92 -1.83 - - -1.49 -0.98 -2.97
- 0.89 4.26 - - - 2.36 - - - - - 3.45 - - 1.48 - - 0.78 -0.56 - - - - - - - - - - - - - - - - - 2.35 -0.58 - - - - - - - - -
- - - -2.92 -3.49 - -3.26 - - -3.55 - 2.11 -2.06 -3.48 - -0.91 - - - - - - - - - - - - -0.39 - -2.27 -1.56 -4.11 -0.08 -5.01 -1.89 - -1.94 1.02 - - 5.06 1.36 - 0.52 - - -3.01
- - - - - - - - - - - - 3.78 - - - - - - - - - - - 4.8 - - - - 2.65 - - - - - - - - - - - - - - - - - -
-2.16 0.51 - - - -5.82 - -2.0 - -3.01 - -9.29 -0.77 -0.36 -0.98 -1.56 -3.3 -3.86 -4.22 -0.37 -0.35 -3.64 -2.11 -1.28 - -2.6 -5.04 - -1.98 - 0.87 0.76 -2.25 -1.12 -4.47 -0.48 -3.5 0.0 -3.13 -2.72 - 3.61 2.88 -6.67 1.17 3.63 - -1.78
-4.07 -9.01 4.62 1.52 3.56 -1.39 1.31 -5.51 - -5.18 -2.72 - - -3.41 - -2.12 - - 0.26 -5.86 - -5.69 -5.28 -7.27 - -7.4 -4.26 - -3.47 -6.01 - -6.8 -4.94 -5.51 -9.57 -2.45 0.48 -1.78 0.35 -2.42 -3.5 -1.09 - - - - - -
-0.96 -4.6 - - 1.76 1.72 - - - - -1.21 - -0.33 0.03 - 1.82 - - - - - - 1.39 1.28 -0.9 2.4 0.82 - -1.98 - - - - - - 3.27 0.97 1.07 3.06 - - - - - - - - -
-6.81 -2.64 - -7.58 - - - - - -9.05 -8.08 - - 1.72 -1.66 -4.61 -6.7 -4.05 -4.48 -2.56 -7.26 -1.15 -3.29 0.47 -1.54 0.99 2.5 -3.49 0.1 -6.54 -5.21 -0.27 -1.03 1.01 -0.27 1.91 2.64 0.8 -0.46 -4.47 -4.58 3.64 -1.01 -3.25 1.55 - - -5.3
- - - -3.09 - - - - - - - - 2.13 -4.0 0.01 0.18 - -1.2 - -4.16 - -2.02 - -3.79 - -5.1 -2.94 - -2.15 - -4.44 - -0.27 -0.92 -6.6 - 4.88 3.03 -3.1 - - -1.06 - - -1.97 - - -2.61
-2.18 -0.35 - -8.31 -5.79 -4.75 -8.24 - - -8.74 -7.33 - - -0.54 -0.75 0.01 -2.3 -1.56 -0.57 0.3 -0.91 -1.24 -0.89 1.14 -1.64 1.48 2.08 - -2.48 -7.04 -2.02 0.23 -0.65 1.31 -2.34 2.85 -0.35 1.44 1.7 -6.24 - 2.94 -0.17 -3.7 0.85 0.77 - -3.86
-1.34 1.16 -0.56 -0.82 -0.87 -3.97 -1.38 -5.19 - -7.69 - - - 2.7 0.97 -0.59 -2.02 -1.34 -0.02 0.9 -0.55 -0.41 -0.5 -1.5 -1.04 -0.86 2.17 -0.1 -0.13 -3.41 -0.62 -2.69 -0.79 -0.02 -0.86 -0.31 0.1 0.68 1.25 -1.67 2.88 -0.89 -0.65 0.93 -1.61 - -4.35 -0.77
-4.81 -0.03 0.39 1.92 -0.74 -2.58 2.02 -3.62 -4.99 -5.5 -4.78 - -5.1 -0.19 0.28 1.27 -2.44 -1.77 -0.41 0.45 -2.48 0.5 -0.03 -0.27 -2.67 0.66 -0.9 -2.43 -1.49 -4.7 -1.66 -0.38 1.15 0.02 -0.52 0.96 2.1 0.96 2.0 -3.52 - 1.85 -0.1 -2.88 0.57 - - -4.45
-1.86 -2.89 -3.62 -5.09 -3.27 -2.43 -5.87 -4.53 - -6.0 - -5.43 -5.47 -1.08 -4.44 0.93 0.38 -3.08 -1.0 0.57 -5.39 -0.4 1.26 -1.88 -5.43 -1.52 -2.78 1.23 0.19 -6.29 -3.99 -6.0 -0.0 -3.72 -1.66 2.47 3.56 2.75 2.36 -2.46 - 0.7 -0.15 -6.42 -1.54 - - -8.19
-1.39 -0.05 -0.62 -0.57 -0.29 -1.41 -0.43 -4.52 -4.69 -4.76 -4.72 -1.88 -3.21 0.04 -1.44 1.16 -2.33 -1.39 -1.94 -0.44 -1.9 0.19 -0.17 -0.05 0.48 -0.29 -3.28 0.3 0.47 1.2 -0.08 2.29 0.61 0.56 -0.18 0.49 1.33 1.32 1.69 -1.19 -8.04 1.02 0.25 -0.05 -0.42 - 0.48 -0.0
1.44 2.83 0.31 -0.69 -1.57 1.67 -0.94 1.01 -0.89 -1.26 -2.92 -6.1 0.49 0.56 0.54 0.09 -1.08 -0.78 -1.39 -0.45 0.03 -0.69 -0.66 -0.27 0.16 0.33 0.85 -2.48 -2.57 0.19 -0.68 -1.13 -0.61 -0.74 -0.37 -0.01 0.5 1.2 0.33 -1.41 -1.57 -0.02 -0.68 -1.25 -1.13 - -6.53 -0.81
1.2 0.13 0.98 0.24 1.16 0.26 0.29 -2.03 -1.15 -3.47 -1.11 0.79 -4.18 0.38 0.1 0.29 -1.4 -1.63 -2.18 -0.34 -0.91 -0.39 -0.31 -1.15 -2.02 -1.18 -1.26 -1.19 -0.77 -2.21 -0.92 0.46 -0.91 0.18 -1.25 -1.57 -1.01 -0.32 0.46 -7.13 -3.9 3.17 1.14 0.68 1.45 - -12.2 -0.04
4.0 0.02 1.03 0.24 0.51 -2.42 -0.03 - - -7.38 -5.96 -3.19 -4.2 -2.19 -1.53 0.76 -4.7 -7.38 -4.75 -0.4 -3.41 -0.94 1.07 -2.43 -7.18 -3.37 - -0.09 -1.03 -7.71 -0.36 -1.21 -0.07 -2.93 1.73 -0.87 -2.14 2.16 -0.71 -4.56 -4.91 -2.34 -1.68 1.53 -0.77 - -0.36 0.24
-3.15 -3.9 - -1.31 - - -0.54 - - - - - - 0.33 -0.33 1.92 - - -3.34 -0.97 - - 0.67 -5.91 - -3.49 - - - - 3.59 -1.47 1.76 -0.61 3.08 1.41 -1.57 2.85 0.95 - - - 0.28 - -1.3 - - -
- - - - - - - - 4.68 3.32 - - - - - - - - - - - - - - - - - - 3.63 - - - - - - - - - - - - - - - - - - -
-0.51 1.24 2.31 - - - - - - - - - - - - - - - 1.59 - 3.55 - - - - - - - 3.64 - - - 2.11 - - - - -2.04 0.21 - - - 2.71 - - - -0.98 -
- -2.54 2.65 - 3.32 3.36 - 1.83 - 0.64 - - 0.7 -3.99 -0.22 - -2.49 0.12 -2.9 -3.1 -2.42 0.73 0.31 -1.59 - -4.39 - -1.17 1.06 - -3.7 -2.04 -2.31 -2.29 -3.25 -0.29 -2.18 -1.95 -2.93 - - - - 1.38 - - - 0.33
- - - 2.41 - - - - - - - - 1.74 - - - - - - - - - - -3.07 - - 5.11 - 2.08 - - - - - - - - - -1.32 - - - - - - - - -
1.35 -2.55 0.69 2.26 0.92 - 1.62 -1.93 -0.17 -0.55 -0.46 2.4 4.6 - - - - - -2.36 -2.52 - - - - - - - - -1.77 - -3.78 - -2.83 - - -1.41 - -3.47 -3.26 - - - -1.33 - - - - -
-3.9 -6.59 -8.26 -9.75 -8.76 -6.67 - - - -11.38 -9.79 -7.08 -7.79 -4.94 -7.09 0.98 -9.94 -8.52 -8.76 -4.95 -7.36 -4.74 -3.98 -5.97 -7.54 -8.24 -4.7 -7.04 - -9.93 -6.25 -7.7 -4.28 -5.82 -2.29 -3.17 0.27 0.02 0.53 -0.83 -3.37 -0.3 -6.34 -2.23 -0.48 1.57 5.17 -2.07
-0.87 -1.76 -4.57 -4.27 -3.83 -3.35 -3.73 -3.52 -4.77 -4.35 -5.26 -2.13 -1.83 -0.37 -0.38 0.84 1.64 0.3 -3.0 -2.42 -1.87 -0.86 -3.07 0.72 -2.85 0.95 0.76 -4.08 1.19 -6.71 -3.17 -0.95 -0.5 0.9 -3.84 0.73 0.62 0.54 1.36 -1.57 2.24 1.09 -0.71 -0.94 -1.27 3.16 0.08 -2.07
-0.78 -3.75 -1.27 -1.58 -1.71 -6.29 -1.65 -6.77 - -8.29 - -7.16 - -2.04 - 1.12 -8.03 -7.22 -4.23 -3.83 -6.96 -3.8 -3.1 -2.9 0.23 -2.57 -0.55 -6.13 -3.5 0.15 -1.66 -1.41 -0.88 0.74 -3.07 -5.25 3.83 2.65 3.32 -2.89 -1.0 2.18 -1.23 -3.46 -1.06 - - -2.97
1.92 -6.23 - - -2.7 -3.42 - - - - - -7.15 -3.75 -1.02 - 1.72 - -5.37 -5.62 -4.15 -5.17 -4.0 -4.98 -1.39 0.87 -1.58 3.58 -0.61 2.85 -6.9 - -5.12 -2.08 -2.17 -2.56 -0.87 1.89 1.25 0.64 1.12 - 2.31 -3.37 -2.05 -0.5 -1.62 -4.82 -3.54
-1.34 -2.2 -1.59 -3.88 -2.31 -5.33 -5.3 -4.7 -4.95 -5.54 -4.73 0.75 -2.67 -2.01 -4.41 -0.87 -5.37 -6.15 -4.15 -4.01 -5.34 -3.65 -2.01 -4.33 1.07 -3.51 -4.4 -3.77 -2.44 1.5 -2.14 1.61 0.38 1.65 -2.21 -2.71 0.45 1.64 1.47 -0.65 -2.13 3.33 0.27 1.44 1.06 - 2.21 0.18
2.51 - - - 2.96 - 4.14 - - - - - 3.78 - - - - - - - - - - - - - - - 1.63 - - - - - - - - - - - - - - - - - - -
-1.52 -0.84 -2.73 -4.32 -2.68 -1.87 -3.84 -2.04 -3.23 -2.73 -2.01 -4.99 -2.05 1.12 1.07 -0.19 1.87 1.27 -0.32 -0.45 0.2 -0.29 0.57 -1.74 -0.16 -1.94 0.7 -1.21 -3.61 0.31 -2.74 -0.23 -0.31 1.15 0.67 0.85 1.31 0.86 0.57 -5.9 -1.82 2.49 1.26 -1.8 0.99 - - -0.91
-3.91 -2.93 -4.8 -3.58 - -5.94 -4.92 - - - - -9.39 - 0.57 -2.49 0.69 -0.44 -2.09 3.98 -3.35 -1.75 -2.96 - -0.76 -0.68 -1.83 2.88 - -0.8 -4.74 0.33 -1.58 -0.89 -0.83 -5.48 -2.97 -0.08 -0.12 2.08 -1.35 2.74 0.4 -3.15 - -3.46 - -4.52 -5.69
-4.28 -4.58 - - -1.76 -1.93 -2.51 -2.72 - -0.63 -2.57 - 2.78 2.1 2.9 0.89 0.26 -0.34 -0.85 -0.56 3.35 - -2.24 -1.28 -2.37 -0.58 1.36 - -6.28 0.74 -2.2 - -0.44 -1.18 -2.77 - -1.29 -1.7 0.47 - -1.81 -0.39 -1.87 - - - 0.66 -
-1.77 -5.68 -3.02 -3.65 -2.41 -1.39 -1.92 -4.16 - -1.81 - -5.31 2.86 2.58 - -5.54 - - 0.17 -7.1 - - - -4.41 1.78 -8.59 3.73 - - 2.71 - -3.59 -4.22 -0.49 -5.52 -3.61 -4.79 -2.58 -0.19 -2.47 2.35 -0.04 -1.97 - - - - -5.76
0.13 0.5 0.74 -1.52 0.76 -2.64 -2.34 - - - - - - -0.83 - -1.32 - - -2.78 0.13 - - - -1.55 - -1.53 - -0.14 -0.92 - 0.41 0.66 -1.05 -2.16 -3.89 -1.03 2.9 2.4 4.32 - - -2.84 - - -3.75 - - -
0.56 -0.93 - -5.86 -3.92 -6.23 - -3.31 -1.57 -4.37 -2.9 -1.13 -2.62 0.49 0.61 1.03 0.3 -1.69 -0.67 -0.66 1.3 0.57 0.09 -0.58 1.35 -1.16 0.51 0.54 0.11 1.42 -1.5 -0.01 -0.38 -0.76 0.38 0.61 0.35 2.1 0.71 -0.56 1.21 1.8 -0.11 -1.03 -1.78 - -2.14 -1.25
- - - - - 1.28 - - - - - - 0.91 -0.76 - - - - - -3.16 - - - - 0.91 - 5.31 - -1.17 - -2.44 - - - - - - -2.64 -0.8 - - - - - - - - -
1.85 -7.79 - - - - -4.75 - - - - - - - - 1.88 - - -7.41 -6.86 - - - -6.51 - -6.3 - - 2.46 - - -7.33 -0.55 -2.48 -7.26 - 4.12 3.1 2.64 - - 0.07 - -5.12 0.06 - - -5.3
- - - - - - - - - - - - - - - - - - 1.24 - - - - - - - - - 5.45 - - - - 0.55 - - - - -0.82 - - - - - - - - -
5.35 2.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.66 - - - - - - - - - - - - - - - - -
- -1.5 2.5 0.95 - - - - - - - - 1.85 - - - - - 0.02 -2.32 - - - -1.22 - - - 1.08 1.69 0.76 - -0.69 - - -0.63 - 2.07 -0.69 -1.69 - - 1.96 - 2.63 3.37 - - -0.05
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.