Heatmap: Cluster_170 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-0.47 0.72 -0.26 -0.2 -0.23 -1.4 0.02 -6.52 -7.06 -6.45 -5.8 - -1.71 1.95 1.11 -0.17 0.31 -0.39 -1.15 0.7 0.57 0.38 0.21 1.61 -4.9 -0.0 -2.15 -1.13 -0.39 -7.2 1.9 -0.12 -1.11 -0.38 -0.27 0.6 -0.99 0.36 -2.62 -3.58 -3.61 2.29 1.31 -0.12 -0.43 -5.0 -2.07 0.28
-0.86 0.7 -3.87 -6.46 -5.85 -8.38 -5.79 - - - - -8.35 -7.96 0.45 -1.33 -1.22 -2.66 -0.35 1.4 0.08 -3.69 -1.28 -1.23 2.59 -2.23 1.92 -1.73 -2.78 0.26 -2.38 2.72 -1.26 -0.03 1.92 0.21 1.0 1.29 1.1 1.37 - - 1.07 -1.61 -3.63 -0.14 - -1.19 -3.34
-3.85 0.71 -1.45 2.18 -1.82 -3.07 2.09 - -5.12 - - - -3.06 0.64 - -4.57 - -3.52 -6.09 -2.87 -4.46 - -6.45 4.23 -5.86 1.45 -5.52 -1.5 1.58 -6.68 3.25 -5.42 -6.53 -4.82 -6.16 -5.52 - -6.05 -9.26 - - - -4.14 -4.85 -6.44 - - -6.06
-3.32 -0.08 -6.33 -4.39 - - -8.89 - - -10.16 -8.57 - - -1.54 -3.87 -5.3 -5.08 -2.58 -6.85 -3.03 -7.65 -7.19 -8.45 1.95 -6.89 1.5 -4.59 -3.32 3.84 -7.21 1.09 -1.46 -2.61 -0.02 -6.64 1.88 -4.16 -0.34 -6.36 - - 1.82 2.88 -3.39 0.94 1.82 - -1.65
-8.79 -1.91 -3.45 -2.71 -3.08 -5.72 -3.0 -7.0 -5.25 -7.46 - - -5.16 -2.45 -5.39 -5.01 - -5.2 -6.44 -3.75 -4.18 -6.15 - 4.32 -5.17 1.09 -6.59 -0.86 3.41 -5.72 3.37 -5.17 -5.02 -5.25 -4.89 - -3.95 -5.53 -3.14 -4.42 -2.84 -3.71 -3.75 -5.73 - 1.19 -11.86 -4.11
-1.27 -0.74 -1.74 -3.58 -2.11 -6.17 -3.67 -8.25 -6.5 -9.8 -6.02 -6.8 1.62 -1.71 -1.1 -2.25 - -7.2 -2.32 -2.36 -4.57 -3.52 -3.77 3.6 -0.29 1.5 0.04 -2.56 4.25 -0.32 1.19 -0.84 -3.23 -4.22 -7.58 -3.25 -0.97 -2.89 -0.32 -4.62 -7.36 -4.67 -4.48 - -6.28 - -3.95 -10.47
-0.97 1.07 -0.23 0.66 -0.01 0.35 0.49 -1.38 0.1 -2.8 -0.07 -2.61 1.95 0.31 0.17 -1.22 -1.49 -1.68 -1.36 0.01 -0.57 -1.13 -0.48 1.46 -1.19 -0.47 -2.12 -0.45 2.27 -0.62 2.03 -0.18 -1.76 -1.51 -0.39 -0.35 -0.84 -0.42 -1.98 -3.16 -2.33 -0.31 0.7 0.72 -0.05 -0.75 -2.57 -0.28
- 3.66 - - - - - - - - - - - - - - - - - - - - - 5.14 - - - - - - - - - - - - - - - - - - - - - - - -
-1.85 -0.03 - - - - - - - - - - - -0.44 - - - - - - - - - 3.48 - 0.51 - - 4.85 - 2.2 - - - - - - - - - - - - - - - - -
-1.63 -0.24 - -3.21 -6.69 -4.19 -3.73 - - -7.57 - - -4.28 0.34 -0.3 -4.52 -6.31 - -2.16 -1.38 -6.59 -4.18 -5.2 3.26 -3.1 0.15 - -4.11 4.3 -2.6 3.67 -7.23 - -7.35 -9.64 -5.22 -6.4 -4.37 - - - - - - - - -2.82 -
- 0.02 - - - - - - - -4.35 - -0.98 - -0.41 - -3.78 - - -4.37 -5.14 -3.12 - - 4.36 - 1.15 - -2.64 3.07 - 3.8 -3.6 - - - - - -6.07 - - - - - - - - - -
-0.4 1.43 - - - - - - - - - -4.58 - 1.84 -2.81 -1.6 -3.02 -4.2 - -1.04 - -4.32 -4.81 3.47 - 0.27 -5.01 -3.76 3.86 - 3.62 -6.53 - -5.03 -6.43 -3.29 -5.05 -3.82 - - - - -3.23 - -4.79 - - -4.93
-0.11 2.32 -6.99 -5.17 -8.64 -8.0 -6.25 - - - - - -8.81 1.01 0.38 -7.13 -8.19 -9.57 -7.57 1.08 -5.08 - -7.54 1.99 -6.88 -1.19 - -3.74 3.93 -8.07 4.06 -8.46 -4.89 -10.1 -7.95 -5.64 -8.13 -9.52 - - - - - - -5.7 - - -
-2.16 0.49 -5.09 -2.56 -4.35 -4.27 -4.03 -4.4 -5.22 -3.56 -3.46 - -5.74 1.61 0.95 - -5.09 -5.21 -3.95 -0.37 - - -4.82 0.64 - -2.59 -3.88 -1.45 4.9 -5.05 2.48 -5.3 -3.53 -0.26 -4.78 -4.89 -5.06 -1.34 -2.16 - -4.71 -3.89 -3.81 -2.63 -4.8 - - -2.61
-1.95 -0.05 -2.52 -3.89 -1.28 -1.57 -2.55 - - - - - - 0.02 - -4.99 - - -4.9 -2.97 -3.55 - - 3.07 -1.77 -0.84 - -3.16 1.88 -1.08 3.22 -2.33 -0.41 0.2 -0.29 - -1.88 -0.52 -2.83 -4.82 -3.44 2.12 2.52 1.27 1.4 - - 1.14
-4.84 -0.58 - -6.94 - - - - - - - - -3.34 -0.76 -2.44 -1.9 -3.23 - -2.79 -1.43 -2.99 -2.74 -4.48 4.19 -0.29 3.58 -3.31 -1.6 2.7 -0.33 2.36 -2.28 -1.36 -3.92 -6.43 -2.5 -2.9 -2.68 -5.16 -4.34 -4.08 - -5.56 - -7.87 - - -
-2.42 -0.51 - - -2.63 - - - - -3.06 - -0.2 0.22 -4.26 - -3.78 - - -1.92 -4.27 - - - 3.47 -1.95 -0.43 - -2.42 4.69 -2.7 2.09 - -4.95 - - - - 0.92 - - - - - - - - - -
- 1.09 - - -2.65 -0.74 - - - - - - -2.74 -1.76 - - - - -3.61 -2.04 - - - 4.07 - 0.6 - - 3.25 - 3.75 - - - - - - 1.65 - - - - - - - - - -
- -0.86 - -0.86 - -2.9 - - - - - - - -1.76 - -3.66 - -2.74 -0.84 -5.7 - - -2.44 4.88 -2.83 1.61 -0.79 - 0.94 -1.69 3.07 - -2.81 -3.48 - - - -1.01 -4.98 - - -0.42 - - -2.33 - - -
-2.61 -2.38 - - - - -4.22 - - - - -5.68 - -0.37 0.46 -3.74 -4.51 -1.5 1.99 -5.81 -3.66 -4.26 -2.65 4.59 -1.5 1.18 1.5 -2.6 1.56 -1.37 2.43 -3.77 -4.07 -1.42 - - -3.33 -2.78 - - - -2.31 - -1.63 -1.89 - - -0.45
-2.75 -0.01 - -2.57 - -8.85 -5.7 -5.82 - -7.78 -6.8 - -6.58 -0.29 -7.35 -6.17 - - -6.29 -2.4 -3.15 - -5.89 4.61 -5.8 1.06 -9.47 -3.23 2.95 -6.15 3.46 -5.61 - - -7.31 -5.7 -4.48 -12.24 - - - - - - -7.74 - - -
-3.69 -0.34 -6.37 -3.63 -5.94 -9.32 -6.98 - -10.05 - -6.75 - - -1.85 -8.87 -5.64 - - -11.56 -2.36 -4.06 -10.38 -5.56 4.76 -6.49 0.97 - -3.42 1.18 -5.65 3.9 -5.99 -10.45 -7.66 -7.38 -5.87 -5.73 -10.91 -10.72 - -9.52 - - -8.27 -7.05 - -5.88 -6.14
2.0 -1.22 1.63 2.13 2.92 1.7 0.82 - -5.95 - -5.3 -1.57 - 0.43 - -7.08 -5.15 - -0.74 -2.36 - -2.07 0.9 2.37 - -1.03 - -2.0 2.98 -7.74 0.37 -9.71 - -3.37 -0.85 1.05 -0.42 -2.4 -8.62 - - -4.22 - - - - - -
- -3.51 - - - - - - - - - - - - - -4.94 - - - -6.96 - - - 3.65 - 0.47 - -2.81 4.97 - 1.23 - - - - - - - - - - - - - -3.83 - - -
1.78 -0.04 - - - - - - - - - - -3.84 -1.3 - - -2.28 - -4.0 -2.52 - - -1.76 4.38 - 0.74 -3.27 -1.02 3.48 -2.56 2.79 - -5.2 -4.9 -6.63 -3.14 - -4.66 -7.78 -0.29 - - - - - - - -
- -2.17 - - - - - - - - - - - -2.23 - -4.46 - - -4.31 -6.92 -3.8 - -4.46 4.68 -1.47 1.69 -0.86 - 3.71 - 2.1 -5.44 - - -8.14 - - -10.15 -8.09 - - - - - -3.35 - - -
- -1.53 - - - - - - - - - - - -1.56 -1.16 - - -2.55 - -5.2 - - - 4.45 -1.0 1.01 1.02 - 3.41 -1.48 3.19 - - - - -2.23 - - - - - - - - - - - -
-3.25 0.3 -9.53 -4.8 - - -10.11 - - - -7.8 - -9.32 1.47 -6.55 -6.02 -8.31 -7.14 - -2.74 -4.61 - -6.38 3.96 -6.82 0.46 - -2.76 1.39 -6.38 4.57 -6.58 -11.3 -11.19 -7.8 -6.11 -6.34 -10.67 -13.9 - - - - - -7.53 - -13.23 -
-3.08 2.02 - -3.46 - - - - - - -6.6 - - 0.69 - -6.05 -6.23 - - -2.44 -4.65 -4.54 -5.96 4.12 -4.81 0.89 - -1.67 1.56 -5.48 4.25 -5.6 -5.42 -7.28 -6.09 -5.03 -4.42 -6.29 -9.33 - - - - - -5.94 - - -
-4.56 0.6 -10.22 -5.41 -7.73 -10.13 -7.11 - - -8.96 -8.82 -10.16 - 0.06 1.44 0.65 2.89 0.39 1.9 0.21 2.22 0.06 0.43 1.32 -5.78 -0.6 -3.8 -2.0 0.17 -5.76 1.55 0.18 -1.15 -0.4 -2.75 -1.6 -3.3 -1.93 -0.87 -3.82 0.29 1.09 2.02 -3.94 -4.9 - - 0.6
-3.45 -0.47 - - - -1.31 - - - - - - - -2.26 - - - - -3.51 -3.16 - -3.29 0.74 2.45 -0.22 -0.59 3.54 -1.74 3.97 - 1.13 - -5.92 - - 1.87 0.67 1.13 -4.9 - - -2.86 - - -2.77 - - -
- - - - - 2.67 -2.24 - - - - - - - - - - - - - -2.01 - -0.22 1.04 0.4 -0.84 2.57 - 4.62 - 0.78 - - -3.95 - 1.71 - -2.72 - - - - - - -0.8 - - -
-0.86 -3.12 - - - 0.83 -2.4 - - - - - - -2.7 - -4.46 - - -2.54 -6.42 -3.57 - - 4.02 -2.17 0.89 1.9 -2.33 4.11 - 2.4 - - - - - - -5.14 -7.23 - - - - - - - - -
-2.13 1.69 - -4.77 -7.52 - -8.46 - - -8.96 -8.6 - - -0.51 2.81 -2.48 0.23 1.64 -4.2 1.79 -1.52 1.21 1.57 3.02 -6.74 0.04 -4.65 0.7 2.13 -7.42 2.21 -2.69 -2.25 -3.54 -2.57 -1.14 -4.35 -2.38 -5.61 - - -3.53 - - 0.93 - - -
-9.27 0.22 -4.37 - -3.2 -1.51 -3.67 -1.29 - -1.95 -1.44 -5.76 -1.72 -4.32 -4.1 -5.23 -0.08 -3.53 -3.05 -3.59 -4.37 - - 3.96 -4.51 1.01 - - 3.8 -5.93 -0.08 -1.79 -2.92 -1.14 -2.71 - -5.3 -2.38 -7.57 -3.93 - 1.81 0.77 -2.92 1.98 - -7.98 -1.47
-1.53 -0.05 -5.72 -3.42 -5.29 -5.18 -6.51 -9.89 -9.75 -8.57 -7.27 -8.13 - 0.52 1.47 -0.29 -1.32 -0.63 0.27 -2.15 -1.32 -2.92 -3.56 3.2 -3.46 0.74 -0.47 -2.26 1.53 -5.1 2.92 0.69 -1.52 1.58 -4.06 0.73 1.4 0.87 -0.2 -3.11 -3.26 1.39 -1.82 -4.8 -0.26 - -9.89 -5.09
- -1.65 0.56 3.21 1.68 -1.6 2.39 0.6 -1.59 -4.85 -2.26 - - 0.6 -2.14 -1.87 -3.29 - 1.75 -1.91 - -3.65 -1.59 2.98 - 1.56 - -3.1 1.87 - 2.23 -2.82 -3.64 -3.1 -4.8 - - -5.11 -7.11 - - - -3.13 - - - - -3.29
-3.52 -0.37 0.94 1.39 1.25 0.64 1.5 -3.68 -2.75 -4.28 -2.84 -4.01 2.65 0.32 -0.28 -2.92 -2.62 -2.28 2.27 -0.71 3.33 -2.75 -2.53 1.43 -3.3 -1.65 -1.27 -1.96 0.18 -3.02 2.08 -2.68 -4.03 -2.75 -3.34 -3.27 -3.7 -3.43 -2.68 -4.06 -9.04 -2.51 -4.14 -2.88 -4.73 - -9.85 -4.4
-4.28 -0.64 -8.38 -5.76 -6.26 - -9.86 - - -10.42 -9.47 - -9.02 0.64 -0.12 0.8 -0.06 -0.98 -0.59 -0.2 -1.32 0.22 0.71 2.37 -1.76 0.35 1.66 -0.76 2.87 -5.43 2.65 0.55 -3.74 -1.4 -1.67 -1.54 -1.65 -0.56 -2.15 -6.39 - 1.89 1.83 -2.98 -2.51 - -1.83 0.17
-0.45 1.15 -6.09 -4.94 -4.53 -3.57 -4.29 - - -9.6 - -9.21 - 0.8 -1.07 0.17 0.08 0.69 -2.11 0.72 -0.13 0.71 0.49 1.93 -4.18 1.06 -1.64 -0.63 -1.14 -7.2 2.49 -0.81 -0.61 -0.65 0.34 1.36 -0.47 0.46 -2.73 - - -1.32 0.79 0.73 0.22 2.57 -6.05 0.17
-1.7 0.39 -6.53 -3.36 - - -3.26 -4.08 -3.21 -4.8 -3.15 1.15 -3.23 -0.55 -0.74 -1.93 -1.51 -0.87 2.72 -1.24 -4.51 -2.5 -2.06 3.35 -5.74 0.37 -2.47 -3.63 3.79 -6.49 2.17 -2.93 -2.63 -1.36 -2.02 -0.08 -3.39 -2.09 -4.5 - - -0.81 -3.08 -5.66 -0.99 - - -4.8
-1.56 0.96 - -2.98 -5.96 - -3.36 -7.73 - - - - - 1.12 -2.56 -3.87 -6.29 - -6.19 -2.45 -4.18 -5.22 -0.16 1.65 -3.23 -0.98 -1.25 1.52 3.0 -7.97 2.98 1.0 -0.23 -0.46 1.11 -1.17 0.7 0.03 -2.42 -4.35 - -1.63 1.02 1.64 1.27 - - 0.98
-5.35 -0.78 -4.36 -2.71 -4.14 -3.71 -4.41 -6.8 - -8.94 -5.55 -5.42 -8.28 -0.22 - -6.44 - - - -6.04 -3.1 - -7.44 4.18 0.67 0.59 - -2.72 3.7 0.8 3.28 -5.26 - -9.5 -7.46 - -6.45 -7.82 - - - - -4.34 - -5.34 - - -
-3.71 -0.5 - -8.25 - - - -9.93 - -10.62 -8.84 - -8.8 -1.88 -6.49 -5.18 - - -12.18 -4.53 -4.63 - -7.54 3.51 -2.77 1.77 1.27 -1.68 4.7 -5.97 1.63 -7.46 - -11.71 -8.14 -7.55 -6.89 -9.48 - - - - - - -6.38 - - -
-6.42 -0.49 -6.87 -4.67 -4.77 -7.06 -6.58 - - -7.26 - - -6.53 0.23 -5.6 -6.69 - - - -4.38 -5.45 - -5.05 3.13 -1.09 -0.33 -6.55 -3.39 4.55 -3.45 3.57 -6.09 - - -7.2 - -4.4 -5.96 - -3.05 -6.5 - -5.6 -6.0 - - - -6.79
- -4.39 -6.4 - - - - - - - -7.03 - - 0.99 -2.27 -4.36 - - -6.52 -5.27 -5.62 - -5.9 3.38 -3.81 1.73 -5.38 -5.23 4.57 -4.04 2.99 -6.94 - - -7.53 -6.93 -7.1 -7.79 - - - - - - -6.84 - - -
0.32 -4.31 -2.88 -2.29 -0.74 - -2.27 -4.78 - -5.78 - - - -4.08 - -1.25 -2.97 - -2.99 -2.85 - - - -3.29 -3.78 -3.51 - - 3.56 - -3.91 -5.57 -4.23 -2.59 -8.32 -3.01 -1.07 -0.09 1.02 0.84 4.75 - - - - - - -
-2.17 -2.11 -0.88 -4.6 -1.73 -2.2 -3.69 -4.11 -4.94 -5.91 - -5.27 -0.76 -1.66 -0.5 -1.73 -1.39 -3.31 -0.99 -3.95 -2.3 -5.01 -1.19 4.03 -4.84 1.35 1.52 -2.46 3.97 -4.43 1.73 -3.77 -2.2 -3.22 -3.23 -2.57 -2.01 -2.07 -3.48 - - -2.57 - - -4.48 - - -3.62
- -2.48 1.52 2.73 2.44 -0.64 2.12 - - - - - - -2.32 - - - - -3.16 -5.31 - - - 2.17 - -0.71 - - 3.74 - 2.2 1.97 - -2.71 - - - -4.4 - - - - -2.97 -2.36 - - - -
-4.05 -1.41 - - - - - - - - - - -4.89 1.5 - -6.8 -4.92 -5.24 - -1.95 -6.14 -4.29 -4.71 3.42 -4.15 2.63 -0.7 -2.2 1.42 -7.53 3.64 -1.0 -4.39 -3.49 -3.2 -3.46 - -1.32 -9.82 -3.42 - 2.82 0.71 -1.2 -1.37 -4.35 - -1.32
-0.1 1.79 -9.75 -5.97 - -9.42 -8.12 -9.24 - -13.17 -10.51 - -11.23 -1.78 -1.73 -5.11 -8.46 -7.76 -6.55 0.21 -2.07 -8.56 -4.36 4.59 -3.91 1.42 -6.99 -3.23 2.41 -5.37 2.85 0.74 -4.75 -2.73 -5.94 -4.0 -3.46 -9.99 -11.81 - - - - - -5.56 - - -
- -2.13 - - - - - - - - - - - - - - - - - - - - - 4.8 - 0.55 - - 3.79 - 2.21 - - - - - - - - - - - - - - - - -
- -4.87 - - - - - - - - - - - -3.69 - -4.36 - - 1.17 -6.82 - - - 3.66 - 0.55 - -2.51 4.88 - 0.65 - -6.75 -6.58 -7.15 - -3.52 -5.48 -7.24 - - - -4.29 - - - - -
-3.03 -5.16 - -3.09 - - - - - - - - - -2.74 - -4.07 - - 1.88 - -3.18 - - 4.62 - 1.16 - -1.6 3.5 - 2.34 -5.48 - - -6.75 - -3.23 -3.41 -5.62 - - - - - - - - -
- -3.17 -4.1 - - - - - - - - -3.08 - -2.39 - - - - -0.64 - - - - 3.58 -2.45 0.63 - -2.29 4.74 -2.38 1.89 -5.27 -3.22 0.49 -3.38 -2.61 - -2.37 -6.25 - - -2.62 - - - - -2.93 -
- 1.32 1.18 - 3.04 1.38 - - - - - - - -0.28 - - - - - -0.24 - - - 3.84 - 2.03 - 0.78 2.2 - 0.55 - -0.6 -0.37 - - - - - - - 1.66 - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.16 0.39 -8.43 -7.07 -7.56 -9.87 -7.8 - - -11.24 -10.01 -10.51 -12.24 -0.72 0.02 0.46 2.2 -0.4 2.04 0.04 -0.57 -0.32 0.21 1.65 -1.54 -1.32 -2.19 -1.64 0.71 -1.73 2.27 1.17 -2.22 -0.97 -1.96 -3.25 -1.06 -1.26 -2.09 -3.72 - 1.58 2.74 -0.9 -7.3 -0.43 -0.26 1.49
-3.71 0.72 -0.61 1.4 -1.84 -3.37 1.02 -6.11 -8.46 -5.85 -5.35 -2.16 -4.22 0.18 1.44 -0.43 0.83 -2.52 -0.23 0.63 1.64 0.07 0.76 1.71 -3.17 -0.67 0.02 -0.55 -0.23 -4.16 1.93 0.93 -0.93 -0.55 -0.54 -1.47 -1.53 -0.2 -1.1 -2.68 -4.32 1.62 2.08 -5.12 -4.29 - - 0.65
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.