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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Synchronized diurnal culture 1h (CC-2895) | Synchronized diurnal culture 2h (CC-2895) | Synchronized diurnal culture 3h (CC-2895) | Synchronized diurnal culture 4h (CC-2895) | Synchronized diurnal culture 5h (CC-2895) | Synchronized diurnal culture 6h (CC-2895) | Synchronized diurnal culture 7h (CC-2895) | Synchronized diurnal culture 8h (CC-2895) | Synchronized diurnal culture 9h (CC-2895) | Synchronized diurnal culture 10h (CC-2895) | Synchronized diurnal culture 11h (CC-2895) | Synchronized diurnal culture 11.5h (CC-2895) | Synchronized diurnal culture 12h (CC-2895) | Synchronized diurnal culture 12.5h (CC-2895) | Synchronized diurnal culture 13h (CC-2895) | Synchronized diurnal culture 13.5h (CC-2895) | Synchronized diurnal culture 14h (CC-2895) | Synchronized diurnal culture 14.5h (CC-2895) | Synchronized diurnal culture 15h (CC-2895) | Synchronized diurnal culture 16h (CC-2895) | Synchronized diurnal culture 17h (CC-2895) | Synchronized diurnal culture 18h (CC-2895) | Synchronized diurnal culture 19h (CC-2895) | Synchronized diurnal culture 20h (CC-2895) | Synchronized diurnal culture 21h (CC-2895) | Synchronized diurnal culture 22h (CC-2895) | Synchronized diurnal culture 23h (CC-2895) | Synchronized diurnal culture 24h (CC-2895) | Nitrogen deficient 0min (wt, 2173) | Nitrogen deficient 8min (wt, 2173) | Nitrogen deficient 18min (wt, 2173) | Nitrogen deficient 45min (wt, 2173) | Nitrogen deficient 60min (wt, 2173) | Nitrogen minus 0h (sta_6) | Nitrogen minus 0.5h (sta_6) | Nitrogen minus 2h (sta_6) | Nitrogen minus 4h (sta_6) | Nitrogen minus 8h (sta_6) | Nitrogen minus 12h (sta_6) | Nitrogen minus 24h (sta_6) | Nitrogen minus 48h (sta_6) | Nitrogen starvation 0h (4A+, CC-4051) | Nitrogen starvation 0.5h (4A+, CC-4051) | Nitrogen starvation 10min (4A+, CC-4051) | Nitrogen starvation 1h (4A+, CC-4051) | Nitrogen starvation 2h (4A+, CC-4051) | Nitrogen starvation 6h (4A+, CC-4051) | Nitrogen starvation 8h (4A+, CC-4051) | Nitrogen starvation 24h (4A+, CC-4051) | Nitrogen starvation 48h (4A+, CC-4051) | Sulfur starvation 0h (4A+, CC-4051) | Sulfur starvation 0.5h (4A+, CC-4051) | Sulfur starvation 10min (4A+, CC-4051) | Sulfur starvation 1h (4A+, CC-4051) | Sulfur starvation 2h (4A+, CC-4051) | Sulfur starvation 6h (4A+, CC-4051) | Sulfur starvation 8h (4A+, CC-4051) | Sulfur starvation 24h (4A+, CC-4051) | Sulfur starvation 48h (4A+, CC-4051) | Copper deficient (wt, 2173) | Copper sufficient (wt, 2173) | Iron deprivation 0h (CC-4532) | Iron deprivation 0.5h (CC-4532) | Iron deprivation 1h (CC-4532) | Iron deprivation 2h (CC-4532) | Iron deprivation 4h (CC-4532) | Iron deprivation 8h (CC-4532) | Iron deprivation 12h (CC-4532) | Iron deprivation 24h (CC-4532) | Iron deprivation 48h (CC-4532) | Iron replete (wt, 2173) | Iron-deficient (wt, 2173) | Iron-limited (wt, 2173) | Zink minus (CC-4532) | Zink replete - early (CC-4532) | Zink replete - late (CC-4532) | Zink resupply 1.5h (CC-4532) | Zink resupply 3h (CC-4532) | Zink resupply 4.5h (CC-4532) | Zink resupply 12h (CC-4532) | Zink resupply 24h (CC-4532) | Vitamin B12 and thiamine 0h (A31) | Vitamin B12 and thiamine 0h (DHC16) | Vitamin B12 and thiamine 12h (A31) | Vitamin B12 and thiamine 12h (DHC16) | Vitamin B12 and thiamine 48h (A31) | Vitamin B12 and thiamine 48h (DHC16) | Hydrogen peroxide 0.5h (wt, 2173) | Hydrogen peroxide 0h (wt, 2173) | Hydrogen peroxide 1h (wt, 2173) | Rapamycin 0h (A31) | Rapamycin 0h (DHC16) | Rapamycin 2h (A31) | Rapamycin 8h (A31) | Rapamycin 12h (A31) | Rapamycin 12h (DHC16) | Rapamycin 48h (A31) | Rapamycin 48h (DHC16) | UV-B 1h (wt, CC-125) | BV IXa 0.1mM (4A+, CC-4051) | BV IXa 0.1mM (hmox1 mutant) | BV IXa 0mM (4A+, CC-4051) | BV IXa 0mM (hmox1 mutant) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | -4.45 | - | - | - | - | -2.04 | 0.57 | 1.51 | 1.26 | 1.58 | 2.24 | 2.24 | 1.73 | 1.74 | 1.55 | 1.44 | 1.21 | 0.69 | 0.05 | -0.79 | -1.63 | -1.88 | -1.9 | -2.31 | - | -2.43 | - | - | - | - | 0.61 | 0.67 | 1.64 | 1.82 | 0.94 | 0.29 | 0.04 | 0.52 | 0.77 | 1.37 | 0.56 | 1.5 | 1.82 | -0.61 | -1.32 | -2.43 | -0.73 | 1.11 | 1.39 | 0.63 | 1.56 | 1.81 | 0.89 | 0.93 | 1.42 | 2.15 | -2.38 | -3.49 | -4.68 | -3.42 | -3.38 | -2.23 | -2.67 | - | - | -3.18 | -2.08 | -4.42 | -3.09 | -3.47 | - | - | -3.42 | - | - | - | - | - | -3.2 | - | 1.14 | -1.3 | -1.54 | -3.65 | -1.16 | -3.04 | 0.4 | -3.2 | - | -2.33 | -1.38 | 1.14 | -1.3 | -1.54 | -3.65 | -4.33 | -2.63 | -1.61 | -2.06 | -1.44 | |
| - | - | - | - | - | - | - | - | 0.25 | 2.3 | 0.79 | 1.65 | 1.84 | 2.23 | 2.59 | 2.09 | 2.4 | 1.94 | 1.51 | 2.04 | 1.63 | -0.05 | -1.16 | 1.58 | 0.53 | 0.11 | 0.56 | 0.46 | - | - | - | - | - | 0.54 | 0.57 | 2.97 | 2.44 | 2.03 | 0.2 | 0.24 | -1.73 | -0.34 | 1.08 | -0.91 | 1.64 | 1.84 | -1.53 | - | -1.18 | -1.0 | -0.66 | -1.93 | -1.6 | -0.35 | 0.11 | -0.9 | - | -1.13 | -0.52 | - | - | - | - | - | -0.17 | - | - | - | 0.15 | - | - | - | - | - | - | -2.17 | -2.45 | - | - | -1.92 | - | - | - | -1.58 | - | - | - | - | -1.17 | - | - | - | -1.84 | - | -1.58 | - | - | - | - | - | -0.61 | -1.84 | -1.27 | |
| -3.31 | -2.77 | - | -4.99 | - | - | -4.44 | -2.06 | -0.84 | 2.16 | 2.7 | 2.77 | 2.51 | 2.84 | 2.31 | 1.99 | 2.11 | 1.94 | 1.56 | 1.69 | 1.12 | -0.29 | -0.63 | -1.55 | -2.12 | -2.3 | -1.73 | -4.53 | -2.96 | - | - | - | -2.59 | -0.72 | 0.27 | 0.41 | 0.88 | -0.2 | -0.41 | -1.03 | -1.52 | 0.55 | 1.48 | -1.22 | -0.06 | 1.56 | -1.49 | -1.69 | -4.28 | -1.98 | 0.26 | 1.35 | -0.65 | 1.14 | 1.32 | -1.59 | -3.83 | -5.83 | 0.54 | -3.74 | -1.72 | -3.23 | -0.82 | -0.46 | 0.03 | -0.7 | -4.02 | -3.29 | -0.56 | -2.48 | -5.47 | -2.67 | -2.37 | -2.47 | -1.63 | -0.75 | -2.59 | -1.93 | -1.34 | -1.14 | -1.98 | -4.93 | - | -0.48 | -2.9 | -1.94 | -3.54 | -0.82 | -1.46 | 0.66 | -4.93 | - | -1.67 | 0.27 | -0.48 | -2.9 | -1.94 | -3.54 | -4.86 | -2.49 | -1.88 | -1.86 | -2.18 | |
| -2.83 | - | - | - | - | -4.36 | -3.96 | -2.08 | -0.09 | 1.92 | 2.28 | 1.73 | 1.77 | 1.98 | 2.31 | 1.73 | 1.67 | 1.65 | 1.41 | 1.34 | 0.38 | 0.0 | -0.64 | -1.68 | -1.4 | -0.81 | -2.32 | -4.04 | - | - | - | -2.32 | - | -1.1 | 0.06 | 1.77 | 1.62 | 0.68 | -0.32 | 0.42 | 0.68 | 0.24 | 1.9 | -1.56 | 1.41 | 2.4 | 0.4 | 0.21 | 0.2 | -0.43 | 1.34 | 2.01 | 0.33 | 2.04 | 2.11 | 0.32 | -0.09 | -0.67 | -0.62 | -1.43 | -1.59 | - | -4.01 | -2.44 | -2.09 | -2.43 | - | -4.36 | -2.46 | -3.14 | -3.48 | -3.77 | -3.53 | - | - | -2.76 | - | - | - | -3.44 | -4.57 | -2.74 | -5.32 | -0.4 | -2.65 | -2.23 | -4.38 | -3.76 | -2.22 | -3.87 | -2.74 | -5.32 | -2.2 | -1.01 | -0.4 | -2.65 | -2.23 | -4.38 | -3.41 | -2.39 | -1.64 | -1.7 | -1.75 | |
| -3.81 | -2.27 | - | - | - | - | - | - | -2.07 | 1.54 | 1.66 | 1.41 | 1.91 | 2.8 | 2.67 | 2.19 | 1.6 | 1.38 | 1.35 | 1.21 | 0.86 | -0.1 | -1.07 | -2.73 | -2.28 | -1.94 | -2.59 | - | - | - | - | - | - | 0.18 | 0.39 | 0.94 | 1.65 | 0.48 | -0.75 | -0.69 | -1.47 | 1.0 | 1.85 | 0.03 | 1.61 | 2.44 | -1.11 | -1.13 | -4.7 | - | 1.09 | 1.89 | 0.71 | 2.4 | 2.62 | -0.2 | -2.88 | - | -1.69 | -1.77 | - | -2.91 | -2.7 | -0.84 | -0.79 | -1.15 | -3.44 | -4.34 | -0.86 | - | -3.45 | -2.79 | -2.87 | -5.2 | -2.97 | -0.83 | -4.37 | -5.01 | -3.33 | -1.81 | -1.95 | - | - | -0.59 | -1.36 | -1.73 | - | -2.22 | -1.34 | -0.26 | - | - | -2.75 | -0.99 | -0.59 | -1.36 | -1.73 | - | -5.38 | -2.15 | -1.33 | -1.37 | -1.64 | |
| -2.89 | -0.35 | -0.35 | -0.02 | -1.65 | -0.42 | -0.14 | -0.35 | -0.74 | 1.58 | 2.13 | 2.2 | 2.33 | 2.11 | 1.93 | 1.85 | 1.84 | 1.62 | 1.78 | 1.61 | 1.0 | 0.21 | -0.33 | -0.65 | -0.82 | -0.1 | 0.17 | -0.65 | - | - | -3.09 | -1.97 | -2.76 | -0.59 | 0.23 | 1.56 | 1.84 | 0.73 | -0.3 | -1.29 | -2.49 | 0.09 | 2.36 | 0.92 | 1.86 | 2.51 | -0.62 | -1.29 | -2.26 | -2.91 | 0.38 | 0.98 | -0.24 | 1.34 | 1.54 | -1.48 | -2.6 | -2.98 | -2.2 | -3.91 | -3.23 | -3.58 | -2.87 | -3.09 | -1.09 | -1.71 | -4.1 | - | -3.11 | -3.4 | -3.24 | -3.07 | -5.23 | - | -3.61 | -2.92 | - | -4.7 | -3.61 | -3.32 | -3.44 | -3.38 | -4.37 | -1.75 | -4.1 | -4.26 | - | -2.85 | -1.68 | -1.3 | -3.38 | -4.37 | -3.92 | -3.54 | -1.75 | -4.1 | -4.26 | - | -5.06 | -2.18 | -0.69 | -2.28 | -0.98 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.