- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Synchronized diurnal culture 1h (CC-2895) | Synchronized diurnal culture 2h (CC-2895) | Synchronized diurnal culture 3h (CC-2895) | Synchronized diurnal culture 4h (CC-2895) | Synchronized diurnal culture 5h (CC-2895) | Synchronized diurnal culture 6h (CC-2895) | Synchronized diurnal culture 7h (CC-2895) | Synchronized diurnal culture 8h (CC-2895) | Synchronized diurnal culture 9h (CC-2895) | Synchronized diurnal culture 10h (CC-2895) | Synchronized diurnal culture 11h (CC-2895) | Synchronized diurnal culture 11.5h (CC-2895) | Synchronized diurnal culture 12h (CC-2895) | Synchronized diurnal culture 12.5h (CC-2895) | Synchronized diurnal culture 13h (CC-2895) | Synchronized diurnal culture 13.5h (CC-2895) | Synchronized diurnal culture 14h (CC-2895) | Synchronized diurnal culture 14.5h (CC-2895) | Synchronized diurnal culture 15h (CC-2895) | Synchronized diurnal culture 16h (CC-2895) | Synchronized diurnal culture 17h (CC-2895) | Synchronized diurnal culture 18h (CC-2895) | Synchronized diurnal culture 19h (CC-2895) | Synchronized diurnal culture 20h (CC-2895) | Synchronized diurnal culture 21h (CC-2895) | Synchronized diurnal culture 22h (CC-2895) | Synchronized diurnal culture 23h (CC-2895) | Synchronized diurnal culture 24h (CC-2895) | Nitrogen deficient 0min (wt, 2173) | Nitrogen deficient 8min (wt, 2173) | Nitrogen deficient 18min (wt, 2173) | Nitrogen deficient 45min (wt, 2173) | Nitrogen deficient 60min (wt, 2173) | Nitrogen minus 0h (sta_6) | Nitrogen minus 0.5h (sta_6) | Nitrogen minus 2h (sta_6) | Nitrogen minus 4h (sta_6) | Nitrogen minus 8h (sta_6) | Nitrogen minus 12h (sta_6) | Nitrogen minus 24h (sta_6) | Nitrogen minus 48h (sta_6) | Nitrogen starvation 0h (4A+, CC-4051) | Nitrogen starvation 0.5h (4A+, CC-4051) | Nitrogen starvation 10min (4A+, CC-4051) | Nitrogen starvation 1h (4A+, CC-4051) | Nitrogen starvation 2h (4A+, CC-4051) | Nitrogen starvation 6h (4A+, CC-4051) | Nitrogen starvation 8h (4A+, CC-4051) | Nitrogen starvation 24h (4A+, CC-4051) | Nitrogen starvation 48h (4A+, CC-4051) | Sulfur starvation 0h (4A+, CC-4051) | Sulfur starvation 0.5h (4A+, CC-4051) | Sulfur starvation 10min (4A+, CC-4051) | Sulfur starvation 1h (4A+, CC-4051) | Sulfur starvation 2h (4A+, CC-4051) | Sulfur starvation 6h (4A+, CC-4051) | Sulfur starvation 8h (4A+, CC-4051) | Sulfur starvation 24h (4A+, CC-4051) | Sulfur starvation 48h (4A+, CC-4051) | Copper deficient (wt, 2173) | Copper sufficient (wt, 2173) | Iron deprivation 0h (CC-4532) | Iron deprivation 0.5h (CC-4532) | Iron deprivation 1h (CC-4532) | Iron deprivation 2h (CC-4532) | Iron deprivation 4h (CC-4532) | Iron deprivation 8h (CC-4532) | Iron deprivation 12h (CC-4532) | Iron deprivation 24h (CC-4532) | Iron deprivation 48h (CC-4532) | Iron replete (wt, 2173) | Iron-deficient (wt, 2173) | Iron-limited (wt, 2173) | Zink minus (CC-4532) | Zink replete - early (CC-4532) | Zink replete - late (CC-4532) | Zink resupply 1.5h (CC-4532) | Zink resupply 3h (CC-4532) | Zink resupply 4.5h (CC-4532) | Zink resupply 12h (CC-4532) | Zink resupply 24h (CC-4532) | Vitamin B12 and thiamine 0h (A31) | Vitamin B12 and thiamine 0h (DHC16) | Vitamin B12 and thiamine 12h (A31) | Vitamin B12 and thiamine 12h (DHC16) | Vitamin B12 and thiamine 48h (A31) | Vitamin B12 and thiamine 48h (DHC16) | Hydrogen peroxide 0.5h (wt, 2173) | Hydrogen peroxide 0h (wt, 2173) | Hydrogen peroxide 1h (wt, 2173) | Rapamycin 0h (A31) | Rapamycin 0h (DHC16) | Rapamycin 2h (A31) | Rapamycin 8h (A31) | Rapamycin 12h (A31) | Rapamycin 12h (DHC16) | Rapamycin 48h (A31) | Rapamycin 48h (DHC16) | UV-B 1h (wt, CC-125) | BV IXa 0.1mM (4A+, CC-4051) | BV IXa 0.1mM (hmox1 mutant) | BV IXa 0mM (4A+, CC-4051) | BV IXa 0mM (hmox1 mutant) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1.51 | -0.04 | -0.28 | -0.16 | -0.27 | -0.19 | -0.24 | -0.37 | -0.96 | -0.44 | -0.24 | -0.46 | -0.7 | -1.96 | -1.83 | -1.62 | -1.79 | -1.84 | -1.57 | -1.72 | -1.56 | -1.4 | -1.76 | -2.18 | -1.43 | -1.48 | -1.34 | -0.86 | -1.14 | 0.44 | 1.19 | 1.7 | 2.05 | -0.27 | 1.52 | 1.91 | 1.51 | 1.67 | 1.49 | 1.37 | 1.44 | -1.38 | 2.04 | 0.55 | 1.53 | 1.52 | 1.64 | 2.14 | 0.65 | 0.37 | -0.22 | -0.18 | -0.21 | 0.56 | 0.23 | 0.78 | 0.52 | 1.62 | 1.65 | -0.85 | -0.69 | -1.22 | -2.44 | -2.75 | -2.77 | -2.64 | -1.78 | -2.15 | -2.82 | -2.8 | -2.32 | -2.57 | -3.27 | -2.08 | -2.93 | -2.49 | -3.03 | -3.98 | -3.31 | -2.92 | -2.57 | -2.87 | -3.26 | -0.78 | -1.06 | -2.3 | -0.23 | -0.52 | -1.97 | -0.58 | -2.87 | -3.26 | -2.54 | -2.04 | -0.78 | -1.06 | -2.3 | -0.23 | -1.14 | -0.12 | -0.25 | -0.19 | 0.47 | |
| 1.42 | -0.06 | -0.48 | -0.35 | -0.36 | -0.21 | -0.12 | -0.28 | -1.14 | -0.36 | -0.42 | -0.64 | -0.73 | -1.67 | -2.03 | -1.55 | -1.86 | -1.69 | -1.9 | -1.53 | -1.9 | -1.42 | -1.42 | -1.87 | -1.18 | -1.04 | -1.1 | -0.66 | -0.28 | -0.06 | 0.88 | 1.7 | 2.24 | -1.77 | 0.13 | 1.46 | 1.46 | 1.74 | 1.59 | 1.18 | 1.35 | -0.6 | 1.31 | -0.72 | 0.88 | 1.03 | 1.82 | 2.11 | 1.24 | 0.73 | -0.52 | -0.87 | -0.63 | 0.48 | 0.03 | 0.26 | -0.15 | 0.47 | 1.46 | -0.37 | -0.14 | -0.06 | -1.22 | -1.32 | -1.59 | -1.57 | -0.5 | -0.31 | -1.34 | -0.94 | -1.36 | -1.37 | -1.74 | -2.13 | -2.58 | -2.17 | -3.54 | -4.23 | -3.53 | -2.65 | -2.27 | -1.74 | -1.96 | 0.12 | 0.0 | -1.36 | 1.01 | -0.16 | -1.43 | -0.21 | -1.74 | -1.96 | -1.96 | -1.84 | 0.12 | 0.0 | -1.36 | 1.01 | -0.56 | -0.1 | -0.38 | -0.11 | 0.27 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.