Heatmap: Cluster_111 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-0.55 0.66 -4.87 -6.56 -6.52 -6.4 -6.05 - - -8.38 - - - 0.95 1.53 1.43 0.03 0.52 -1.48 0.5 0.28 0.98 0.74 0.68 1.82 0.89 -1.05 -0.08 -2.92 2.2 -0.22 0.44 1.03 1.07 0.49 0.95 0.86 1.11 0.86 -3.07 - -3.05 -2.96 -4.31 -5.9 - -7.44 -5.12
1.46 2.75 - - - - - - - - - - - 0.14 2.94 - - - - - - - - -2.65 - - - - - - - - 3.81 3.11 - - - 2.78 - - - - - - - - - -
-1.77 - 1.44 - 3.36 3.91 - - -0.54 - 1.64 -0.88 -0.9 - - -1.22 - - - -2.49 1.44 - - -1.53 - -1.29 - - -0.51 - - -1.85 2.81 -1.45 -1.41 - - -3.67 0.92 - - - - - - - - -
1.54 2.31 1.82 - 2.48 - - - - 1.53 - - - 0.32 3.09 - - - - - - - - -0.91 - - - - - - - - 1.75 3.07 - - - -1.82 - - - - - - - - - 2.55
1.47 0.49 -1.29 -1.22 -1.07 -2.16 -0.92 -3.6 -3.43 -3.6 -3.43 -3.91 - 1.05 -2.01 -0.36 -0.43 -0.31 -0.06 0.37 0.38 0.41 0.63 -0.12 0.43 -0.42 1.01 -0.29 -2.08 -0.32 1.05 0.72 -0.14 1.2 0.84 0.53 0.06 0.38 -0.1 0.91 0.68 -0.01 -1.24 0.31 1.51 - -7.95 -0.07
-7.97 -11.34 - - - - - - - - - -10.27 - -8.53 - - - - -10.75 -4.84 - - -8.82 -1.9 3.82 -1.53 -2.81 - -7.47 3.38 -8.44 -0.07 -0.51 3.89 -5.62 -0.83 1.24 -0.12 1.03 -7.18 - -5.22 -2.33 - -5.91 - - -
-2.56 0.88 -2.96 -5.66 -4.76 - -2.61 - - - - - - -0.03 -1.51 1.44 -0.29 0.47 0.09 0.15 1.5 -0.68 -0.9 0.99 -3.74 0.35 -0.39 - -1.71 -3.94 -2.21 -1.05 1.27 1.63 0.26 1.77 -1.5 1.61 0.51 -2.12 2.87 1.92 -2.66 -5.07 0.68 - - -
0.42 2.36 -3.25 -4.88 -3.26 - -3.6 - - -6.31 -4.25 - - 1.25 0.19 -0.1 -2.34 -0.97 -2.08 0.85 -2.29 1.87 2.54 -0.44 - -0.88 -1.34 0.74 -1.93 - 0.06 -0.46 1.74 0.99 1.28 1.86 -1.43 1.21 -0.7 -3.77 -1.73 -2.97 -2.58 0.41 -0.17 - - 0.44
-3.69 -3.31 -4.39 -5.03 -1.22 0.59 -1.6 0.98 1.15 -0.38 0.77 -8.01 0.9 -1.64 -1.38 0.14 0.1 0.02 -0.17 -3.18 -2.54 -6.28 -6.47 1.25 -3.36 1.27 0.43 -5.6 -1.47 -7.27 -1.21 -1.98 -1.52 2.06 -6.95 0.55 -1.51 -0.86 -1.63 -4.05 -1.84 2.92 2.49 -5.52 0.37 -5.38 1.06 -1.49
0.29 2.82 -1.71 -3.52 -0.36 0.57 -2.77 -1.41 -3.36 -4.76 -3.65 -6.71 -2.07 0.91 0.0 -0.64 -1.89 -2.25 -2.68 0.1 -0.64 -0.78 -0.76 -0.94 0.35 -1.34 -2.19 -0.85 -1.0 1.07 -1.53 -0.46 0.6 2.76 -1.23 0.29 0.01 1.2 0.45 -2.14 -2.86 0.7 0.91 0.89 -1.65 - -5.23 0.78
-8.02 1.04 -7.41 -2.9 -5.97 -7.94 -2.24 - - -9.48 -8.19 - - -0.52 -4.37 -7.56 - -9.6 -6.74 -0.82 -7.44 -8.09 -9.16 -2.52 1.29 -3.28 -6.05 -0.35 0.11 0.86 -0.69 -0.44 0.06 1.91 -6.0 -5.97 -2.71 -0.61 -0.45 - - -0.53 2.7 3.76 1.63 - -0.17 2.42
3.52 4.27 - - - - - - - - - 3.45 - - - - - - - - - - - - - - - - - - - - - 2.66 - - - - - - - - - - - - - -
0.35 3.75 - 0.84 0.57 0.54 -0.68 - - -2.29 - - - 2.32 2.3 - - - - -0.3 -0.9 - - -0.41 - -2.91 -0.9 - -0.57 - -1.22 - -0.39 1.03 -2.52 - -0.94 0.51 -2.33 - - - 0.9 1.49 - - - 2.04
1.66 3.46 -1.86 - - -0.01 - - - - - -1.18 -0.82 2.79 -0.59 - - - - - - - - -1.0 - - - - -3.0 - - - 1.43 3.89 - - - 2.37 -2.23 - -1.23 - - - - - - -
0.53 -0.03 -3.23 - -3.64 - - -3.72 - - - - - 2.93 1.8 -4.19 - - - - - - - -0.08 - - - - -1.99 - - - 3.79 2.54 -5.1 - - 3.65 -0.41 - - - - - - - - -
0.66 3.05 0.43 -0.09 1.2 0.83 -0.79 -1.16 0.19 -1.58 0.8 -1.87 -0.76 1.97 1.01 - - - - - - - - -0.93 - - - - - - - - 1.89 3.64 - - - 1.54 -3.39 - - - - - - - - 0.09
-2.4 -1.19 -5.68 -4.34 -3.47 -2.61 -4.06 -3.94 -3.04 -3.53 -2.77 -14.8 3.2 -0.59 0.17 -0.56 2.97 2.83 -2.76 -1.93 -2.11 0.3 -0.56 0.1 -7.01 0.14 -5.04 -6.3 -4.04 -10.35 -1.16 -1.91 0.0 1.66 -2.35 2.14 -7.13 0.12 -2.69 -6.75 -7.57 -0.57 1.15 -7.33 -0.57 -2.85 -4.32 -0.86
0.25 2.35 0.18 -0.95 0.58 -0.2 -0.84 -3.57 -3.79 -3.84 -2.8 -0.71 0.17 0.21 -1.36 0.19 -0.46 -0.53 -2.13 -0.08 -0.62 -0.32 -1.62 -0.55 0.7 0.02 -0.26 -2.51 -3.69 0.58 -0.92 -0.47 0.41 1.98 -0.64 -0.91 0.69 0.82 1.18 -4.39 - 1.03 -0.22 -0.95 -0.48 -3.0 1.87 -0.36
2.31 1.87 1.38 2.17 2.26 0.13 1.68 - -1.14 - -1.54 -0.38 -3.16 -0.01 - -1.21 -1.67 -2.79 -0.02 -0.09 -1.6 -1.64 -1.49 0.44 -1.8 -0.84 -1.01 -0.03 0.75 -0.97 0.22 0.55 -1.82 -1.08 -1.26 -1.46 - 0.16 -0.41 -0.69 -1.04 0.53 -0.82 -0.8 -2.37 - -3.37 -0.39
- 0.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.28 5.47 - - - - - - - - - - - - - -
-2.47 1.97 0.76 - 0.69 -0.91 - - - - - - - 1.86 - -0.26 -2.16 -0.4 - 0.36 -0.78 1.39 1.28 -0.41 - -0.71 -0.96 1.36 -3.35 -1.86 -0.57 -0.25 0.89 1.08 -0.56 1.09 -0.67 0.78 -0.26 -2.05 - 0.5 -0.41 -1.41 0.59 2.66 - -0.33
0.69 2.19 1.77 3.15 1.92 0.34 3.56 -1.88 0.14 - 0.32 0.62 -2.32 -0.43 - -2.87 -1.7 - - -4.31 -1.75 - - -1.69 - - - - - - -2.08 - -1.19 -0.78 -2.89 -1.63 -0.8 -0.76 -3.02 - - - - 0.05 - - -2.96 1.19
2.8 3.43 - - 2.18 - - - 1.94 0.63 - -1.79 - 1.02 - - - - - - - - - - - - - - - - - - - 0.02 - - - -0.58 - - - - - - - - - 4.03
-0.71 -0.12 -2.16 -2.52 -2.14 -2.27 -2.26 -0.11 0.72 1.78 1.5 -0.73 -0.67 -0.25 -0.13 -0.43 -0.84 -1.63 0.47 -0.07 -1.42 -1.19 -1.09 -0.96 -0.2 -0.67 0.66 -0.62 -1.26 0.15 -1.35 0.51 -0.98 1.39 -1.58 -0.16 0.21 -0.2 0.68 1.69 0.59 1.02 0.23 -0.72 -1.1 0.2 1.16 -1.39
0.45 1.44 -0.35 - 1.69 1.68 - -3.0 - -4.19 - - - 0.87 0.31 -0.38 -0.25 0.49 -1.61 0.62 0.24 -1.18 -0.05 0.21 -2.38 -0.04 0.05 -1.43 0.94 -6.49 0.82 0.26 -0.18 1.02 0.38 -0.01 0.37 0.36 -0.89 -2.78 -4.29 0.19 0.88 0.35 0.66 0.76 - 0.39
- - 4.6 - 0.47 - - - - - - - - - - - - - - - - - - -0.3 - - - 1.27 1.31 - - - 0.0 - - - - -1.0 -1.85 - - - 2.92 2.61 - - - 0.25
- - - - - - 2.98 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.11 -0.54 - - - - - - - - 4.02 3.44 - - 3.34
-3.69 -1.53 - - - - - -4.0 -2.78 -1.95 -0.96 - - 1.97 -0.96 -0.79 -1.31 -5.07 -2.04 -2.46 -3.97 -1.82 -1.99 -0.13 -1.36 0.45 0.71 - -1.79 -2.7 -3.69 0.21 1.29 2.4 -5.93 -0.91 -1.67 0.66 0.62 -2.19 4.15 0.55 -0.94 - -0.43 -0.02 - -0.43
-6.24 -1.28 -5.62 - -5.52 -2.69 -4.4 1.43 1.03 2.15 1.62 -6.91 -1.54 -1.19 0.24 -0.03 0.14 -1.58 2.25 -0.74 -0.21 0.69 -0.6 -0.56 -0.76 -0.05 -1.65 -5.64 -4.08 -1.38 -4.05 0.26 0.42 1.85 -1.43 1.69 0.34 -0.41 1.24 -2.55 -1.28 -0.52 -0.87 -2.65 0.96 -0.13 -5.08 -3.02
-6.35 -1.72 -4.56 -7.69 -5.87 -2.67 -5.36 1.44 1.75 2.22 2.42 -5.58 -1.06 -0.86 -0.75 -0.67 -0.3 -2.02 1.22 -0.93 -0.86 -0.24 -1.13 -1.32 -2.17 -0.86 -2.41 -4.47 0.47 -1.74 -4.6 -0.7 0.19 1.52 -1.72 0.49 0.2 -0.27 1.82 0.14 1.26 0.32 -0.02 -2.03 -0.34 0.46 -4.65 -2.87
-2.92 -0.41 - - - - - - - - - -5.36 - 0.57 -0.81 -3.85 - - - -1.97 -1.82 - -3.9 -0.46 - -1.21 - - - - -1.9 -2.95 1.71 3.98 0.05 -0.3 -0.32 1.74 -3.22 - - 2.16 0.59 - 3.53 - - -3.38
1.51 4.45 - - - - - - - - - - - 2.47 0.41 - - - - - - - - -0.03 - - - - - - - - 0.19 2.59 - - - 1.68 -3.44 - - - - - - - - 2.32
2.02 2.28 2.63 1.31 2.69 2.12 1.89 - -1.61 - -1.32 - - 2.24 - - - - - - - - - -0.91 - - - - -1.62 - - - -0.7 0.69 - - - 1.61 -4.58 - - - - - - - - 2.1
-4.12 -0.03 -0.91 -0.98 -0.04 -0.61 -0.32 -5.07 -5.11 -5.54 -5.27 -5.42 -4.36 -0.37 0.13 0.78 -1.68 -1.59 -3.12 -0.08 1.81 0.63 0.89 -0.77 -2.66 0.11 1.21 -1.1 -2.72 -5.08 -1.94 1.95 -0.2 -0.5 -1.79 -0.11 -0.73 -0.27 -0.96 -2.82 -0.18 1.73 2.34 0.13 1.18 1.77 - 0.39
- - - -0.42 - - - - - - - - - - - - - - - - - - - -2.63 3.4 -0.54 -0.54 - -0.14 4.73 - 2.1 0.34 1.07 - - - - - - - - - - - - - -
1.87 0.17 -0.65 -3.35 0.01 -0.97 -3.09 -4.16 - -5.08 - -2.51 -2.88 -0.89 -1.53 -2.13 -0.62 -2.0 -1.66 0.34 -1.3 -2.04 -0.59 -0.86 0.49 -1.25 -1.51 1.1 1.28 2.93 -0.83 -0.68 -0.37 2.93 -1.75 0.64 -0.33 0.28 -0.4 0.62 - 0.29 -0.38 -0.09 -0.41 -0.81 -8.08 -0.7
-0.82 -1.73 -4.19 -6.46 -4.52 -1.38 -5.23 1.13 1.69 2.41 2.02 0.83 -0.6 -0.12 -0.42 -0.88 -1.02 -0.8 1.14 -1.56 -2.43 -1.94 -2.64 -0.97 -2.13 -0.45 0.6 -4.62 -4.73 -2.51 -2.69 -0.87 0.06 1.79 -2.4 -0.5 1.14 0.67 1.14 -5.4 -5.53 1.57 1.04 -2.57 -0.08 -0.22 -1.05 -2.87
-1.4 3.19 -2.14 - - -2.14 -1.03 - -1.99 -3.39 - - 0.79 2.48 - - - -1.98 -2.26 -2.18 -0.79 0.94 -0.04 0.21 - -2.18 1.31 - -0.42 - 0.47 0.29 0.46 2.78 0.55 -0.07 -1.83 1.57 -0.69 -1.62 - - -0.59 - -0.57 - - 1.2
- 4.22 - - - - - - - - - - - 3.61 - - - - - - - - - -2.8 - - - - - - - - 2.71 - - - - 2.91 - - - - - - - - - 1.58
0.9 1.83 1.15 0.02 1.32 0.41 0.56 -3.51 -5.61 -4.48 -4.06 0.2 -1.92 0.55 1.02 -0.39 -1.42 -1.44 -1.8 0.5 -1.31 0.27 0.24 -0.04 0.58 -0.06 -0.23 -0.79 -1.47 1.07 -0.18 -0.2 0.25 1.1 0.44 0.77 0.03 1.08 -0.35 -2.54 -5.97 -1.28 -0.89 0.47 -2.4 - -3.33 -0.49
1.29 4.84 - - - - - - - - - 3.07 - 0.43 - - - - - - - - - -0.23 - - - - - - - - - 1.68 - - - 1.67 - - - - - - - - - -
2.69 4.1 - 1.05 - - 1.1 - - - - -0.96 - 1.97 - - - - - - - - - 0.25 - - - - 0.7 - - - 0.81 2.67 - - - 2.21 -2.24 - - - - - - - - -
0.78 2.5 -3.07 -4.25 -2.79 -7.55 -4.93 - - -7.12 - -12.19 - 2.6 0.06 - - - - - - - - 0.04 - - - - -2.14 - - - 1.39 4.11 - - - 3.41 -0.97 - - - - - - - - -0.28
-2.22 -0.93 1.58 1.98 1.69 0.1 1.73 - -6.63 -4.86 -3.99 - - -3.94 -4.19 - - - - - - - - -3.73 - - - - -1.46 - - - -0.78 3.99 - - - -0.24 -6.4 - - - - - - - - 3.88
2.31 3.03 -3.16 -0.7 -1.42 -3.16 -0.62 - - - -2.72 -6.82 - 1.36 - 0.95 0.65 -2.07 -2.77 -0.72 -0.41 -3.11 -1.61 -0.29 -2.09 -0.11 0.51 - -0.66 -3.54 -0.46 0.32 0.8 1.98 -0.97 -0.09 0.79 1.28 0.24 -0.64 -0.67 0.32 0.2 -2.01 -1.59 -0.25 -1.56 -0.75
-2.05 -2.11 1.26 3.62 1.02 0.08 3.58 -5.75 -1.34 -4.1 -3.05 -2.73 -4.77 -0.87 0.33 0.43 -1.17 -5.96 -3.01 -2.87 -0.84 0.46 -1.14 -0.71 -1.18 -0.01 -2.26 - -1.18 -1.49 -5.61 -0.75 0.13 1.61 -4.83 -1.91 0.3 -0.39 -0.96 -3.72 - - - - -4.42 - - -5.63
- -1.0 1.93 1.39 2.31 1.34 2.22 - - - -2.5 - - 0.47 1.2 -0.64 -0.63 - -2.59 -3.49 -1.07 -0.36 -0.12 -0.86 -0.46 0.31 - - - -0.67 -3.84 -0.45 2.31 3.2 -4.42 - -1.48 0.43 -0.94 - - - -0.05 - - - - -
- -0.66 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.23 4.55 - - - - 0.57 - - - - - - - - 4.16
0.88 0.51 -6.66 -7.04 -8.62 - -6.35 - - -8.44 -8.06 -8.96 -2.52 1.26 -0.26 -3.27 -0.92 0.52 -6.05 -4.44 -6.31 -4.56 -4.79 -0.37 -8.42 -3.05 -8.14 - 0.13 -9.76 -2.19 -3.86 2.35 4.31 -4.77 -0.47 -7.9 1.87 -2.04 -4.38 -4.04 -0.0 0.12 -5.34 -1.92 -0.61 -0.94 1.79
-1.43 3.39 1.39 0.99 0.93 -0.43 0.8 -0.59 - - - - -0.75 1.81 - -0.97 -0.25 - - -0.06 - -0.0 - -0.59 0.54 - - - -1.39 - -0.44 -1.74 -1.15 0.61 -2.93 -0.05 0.06 1.37 -0.08 1.73 - - 1.61 0.62 0.03 - - -
3.93 4.89 - - - - - - - - - - - 1.28 - - - - - - - - - -1.37 - - - - - - - - - - - - - -1.93 - - - - - - - - - -
3.12 4.02 0.16 0.92 0.82 - 0.65 -1.23 0.59 - - -2.97 - 1.15 - - - - - - - - - -2.14 - - - - - - - - -0.05 2.48 - - - 1.44 -3.06 - - - - - - - - 1.5
-4.21 -0.86 - - -5.33 - - - - - - - - -1.51 - -5.4 - - -4.16 0.15 -2.05 - - 1.07 -0.74 -1.29 - 1.06 0.47 -7.75 -0.29 2.45 2.39 4.23 -0.69 - -5.89 2.95 -3.66 -1.57 - - - - - - - -
-2.58 0.13 -6.02 -7.11 -7.6 - -8.05 - - -8.48 - -10.48 -4.24 1.57 -4.07 -2.04 -2.46 -0.1 -1.76 -0.09 4.25 -6.93 -6.54 -1.29 -1.99 -1.6 1.65 -5.92 -2.34 -4.72 0.65 -0.51 -1.53 1.79 -5.31 -3.85 -1.68 -0.95 -2.01 - - 3.05 -0.15 - 0.1 - - -3.48
2.53 -3.88 1.68 2.48 3.03 2.36 3.05 -1.08 - -1.16 - - -1.27 - 0.5 - - - - - - - - -5.08 - - - -0.45 - - - - -1.1 0.53 - - 0.54 -1.28 -3.19 - - - - 1.1 - - - 1.16
1.69 4.14 - - - - - - - - - - - 2.32 - - - - - - - - - -1.55 - - - - - - - - 1.01 3.76 - - - 1.37 - - - - - - - - - 1.91
-1.5 -4.6 -5.65 -3.61 -2.4 -2.78 - - - -7.24 -5.65 - - -1.13 -3.53 -1.46 -1.51 0.45 -5.38 -2.0 -4.15 -2.84 -4.04 0.92 -3.63 1.39 -3.6 - -4.11 -3.5 -4.53 -0.49 1.02 1.88 -2.63 1.85 -1.31 1.51 4.39 -0.96 - -0.91 0.22 -0.13 -1.81 -0.86 -0.8 -2.97
-1.11 1.75 -4.03 -2.94 -2.42 -3.05 -2.2 -0.66 -0.13 -4.56 -4.47 -10.01 - 0.42 -0.22 2.5 1.9 -0.25 -0.06 1.56 -0.99 1.64 1.77 1.45 -4.95 1.28 -2.05 -3.25 -3.51 - -0.67 -0.42 1.83 0.67 -2.55 0.57 -2.19 -0.12 1.48 -2.3 -0.89 - - - - - - -
3.1 3.16 2.03 1.6 1.57 1.27 0.66 - - -2.05 - - - 1.99 1.36 - - - - - - - - -1.01 - - - - -0.42 - - - 0.54 1.02 - - - 0.7 -1.49 - - - - - - - - 1.54
-5.86 2.74 -1.55 - -0.34 - -1.44 - - - - - - 4.78 -0.0 - - - - - - - - -4.26 - - - - - - - - 1.86 1.65 - - - 2.15 -4.37 - - - - - - - - -
-5.65 -3.22 -2.43 -5.16 0.15 2.85 -0.49 2.77 1.86 -1.79 -1.94 -0.91 0.82 -3.53 -0.72 - -1.08 0.05 -1.73 -2.99 -5.28 -6.06 - -4.51 2.55 -5.06 -4.5 -2.36 -3.46 2.0 -6.37 1.1 -1.47 1.92 -8.29 -3.96 -6.79 -2.03 -0.29 -2.63 -0.28 -3.77 0.63 -0.14 -2.19 -4.76 -10.72 0.22
- -3.3 - -4.5 -4.99 - - - - -6.87 - - - -0.47 - -0.77 -5.61 - -2.93 -5.02 -3.71 0.74 2.14 0.72 -2.86 1.48 -1.76 -1.95 0.64 -2.98 -5.2 -1.48 3.0 -3.97 1.17 1.83 3.34 1.34 2.68 - - - - - - - - -
1.86 4.1 - - - - - - - - - - - 2.6 - - - - - - - - - 0.24 - - - - - - - - 2.11 2.51 - - - 2.63 - - - - - - - - - 1.89
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.