- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Archegoniophore (female) | Antheridiophore (male) | Antheridium (male) | Sperm | Sporeling | Thallus | Thallus (vegetative) | Thallus (MpPAP1OX-1) | Thallus (Tak1-2) | Thallus (MpPAP1OX-3) | Thallus (MpPAP1OX-2) | Thallus (Tak1-3) | mid rib (male) | Gametophyte | Gemmaling (female, hpt2040) | Gemmaling (male, hpt2040) | Gemmaling (BC3-38) | Gemmaling (Tak1) | Gemmaling | Gemma cup | gemma cup (male) | Aseptically grown rhizoids, thalloid, gemmae | Control | Cold (3°C) | Dark (3 days) | Heat (33°C) | Light (435 uEm-2s-1) | Osmotic (100 mM mannitol) | Nitrogen deficiency (0 mM KNO3) | Salt (40 mM NaCl) | Cold-Dark | Cold-Light | Cold-Mannitol | Cold-Nitrogen deficiency | Cold-Salt | Heat-Dark | Heat-Mannitol | Heat-Nitrogen deficiency | Heat-Salt | Light-Salt | Mannitol-Dark | Mannitol-Light | Mannitol-Nitrogen deficiency | Nitrogen deficiency-Dark | Nitrogen deficiency-Light | Salt-Dark | Salt-Mannitol | Salt-Nitrogen deficiency | ZT2 (2 hours after light) | ZT6 (6 hours after light) | ZT10 (10 hours after light) | ZT14 (2 hours after dark) | ZT18 (6 hours after dark) | ZT22 (10 hours after dark) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -3.76 | - | - | 4.56 | - | -7.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.17 | -0.15 | -0.93 | 0.61 | -1.56 | -0.9 | 0.2 | -1.47 | -0.64 | 0.02 | 0.48 | 1.04 | -0.26 | 0.86 | 0.71 | 2.06 | 0.51 | -1.41 | 0.7 | -0.59 | -0.77 | -0.11 | 0.71 | -0.17 | -0.77 | -1.57 | -1.8 | -1.82 | -1.8 | -0.82 | -1.6 | -1.59 | |
| -4.92 | - | -9.44 | 5.75 | - | - | -11.09 | -9.31 | - | - | - | -8.39 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | 5.71 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.88 | -0.95 | - | - | - | - | -0.95 | - | - | - | - | - | - | - | - | - | - | - | |
| -0.21 | -4.12 | -2.18 | 5.68 | -7.28 | -4.2 | -3.67 | -2.47 | - | -4.64 | -4.22 | - | - | -4.18 | -3.43 | - | -4.12 | -3.61 | - | -2.57 | -3.7 | -3.47 | -8.13 | -6.72 | - | -7.4 | - | - | -3.65 | -5.35 | -5.48 | -7.21 | - | -5.07 | - | - | -6.42 | -4.36 | -7.37 | - | - | -6.25 | -7.41 | -5.1 | -4.82 | -7.19 | -7.34 | -6.24 | -5.06 | -4.96 | -7.16 | -5.92 | - | - | |
| 1.55 | -0.09 | 3.46 | 4.98 | -3.6 | -7.64 | -5.82 | -4.41 | - | - | - | - | -5.71 | -6.09 | - | - | - | - | - | -4.75 | - | -4.38 | -4.33 | -3.89 | -6.32 | -2.6 | -3.06 | -4.45 | -3.8 | -6.69 | -1.65 | 0.0 | -2.98 | -2.79 | -3.3 | 1.78 | -2.3 | -1.17 | -2.69 | -4.91 | -2.24 | -5.03 | -4.58 | -3.69 | -2.82 | -2.93 | -4.24 | -6.04 | -5.87 | - | -3.76 | -4.02 | -6.78 | -4.03 | |
| - | - | - | 5.69 | 1.18 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.1 | - | - | 5.45 | 2.4 | -4.96 | -2.54 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.76 | - | - | - | - | - | - | -0.06 | - | - | - | - | -0.83 | - | - | - | -0.52 | - | - | -1.99 | - | - | - | -1.88 | - | - | - | - | - | - | - | - | - | |
| -0.88 | - | - | 5.72 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.77 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | 0.2 | 5.58 | -2.19 | -4.0 | - | - | - | - | - | - | - | -2.64 | - | - | - | - | - | - | - | - | -2.25 | -1.99 | - | 0.03 | - | - | - | - | - | -2.47 | -2.37 | - | -1.36 | - | - | -1.01 | -2.65 | -1.43 | - | -2.54 | - | -0.38 | - | - | - | -1.58 | - | - | - | - | - | - | |
| -2.65 | - | - | 5.66 | - | -5.38 | -2.34 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.54 | - | - | - | - | - | - | -2.42 | - | - | - | -3.03 | - | -3.12 | -1.46 | - | -1.58 | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.9 | -3.03 | -2.86 | |
| -0.66 | - | 1.51 | 5.21 | 0.03 | - | - | - | - | - | - | - | - | -2.19 | - | - | - | - | 1.03 | - | - | - | - | -1.48 | - | - | - | - | -0.94 | - | - | -1.2 | -1.07 | -0.47 | - | - | 1.66 | 1.7 | -0.73 | - | - | - | - | - | -1.14 | - | -2.24 | - | - | - | - | - | - | - | |
| 1.54 | -0.51 | 1.51 | 5.07 | -3.1 | -2.35 | -1.27 | -4.55 | -2.2 | -3.18 | -2.47 | -2.67 | -3.31 | -2.19 | -3.72 | -2.33 | -2.58 | -3.34 | -2.83 | -2.38 | -3.05 | -1.1 | -3.44 | -3.37 | -0.87 | -1.31 | -3.34 | -2.88 | -2.66 | -3.02 | -1.86 | -1.43 | -2.65 | -3.11 | -3.17 | 0.69 | -0.82 | -0.76 | -0.92 | -1.77 | 0.01 | -1.86 | -2.84 | 0.27 | -2.33 | -0.43 | -2.94 | -3.3 | -2.86 | -3.87 | -4.27 | -3.54 | -2.56 | -2.95 | |
| 1.03 | - | - | 5.32 | 1.64 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.94 | - | - | - | 0.68 | - | - | - | 1.48 | - | 1.44 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.88 | - | - | 5.75 | -3.9 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.9 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 1.23 | 0.16 | 1.91 | 5.25 | -2.2 | -3.06 | -4.08 | -1.23 | -1.3 | 0.31 | -0.76 | - | -2.46 | -1.36 | -0.28 | -2.69 | -2.06 | -2.1 | - | -1.67 | 0.11 | - | -2.96 | -2.95 | - | - | - | -3.23 | -3.67 | -3.91 | - | -1.91 | -3.24 | - | -2.18 | - | -2.74 | -4.97 | -2.44 | - | - | - | -1.65 | - | - | - | - | -2.42 | -4.82 | -3.98 | -4.79 | -2.58 | - | - | |
| -0.44 | 1.71 | 2.37 | 4.86 | -3.73 | -1.7 | -1.75 | - | - | - | 0.28 | - | -1.2 | -1.1 | - | -0.77 | -0.48 | -0.6 | - | - | - | - | -1.55 | - | - | - | -2.07 | -0.28 | 0.08 | - | -2.57 | -0.65 | -2.64 | -2.51 | -2.54 | - | -0.85 | -1.18 | -1.25 | -1.68 | -1.61 | -1.17 | -0.86 | -0.93 | -1.04 | - | -1.14 | -0.4 | -2.35 | -1.03 | -2.57 | -2.41 | -0.54 | -2.29 | |
| -1.6 | -2.71 | -2.32 | 3.68 | 1.07 | 0.16 | -0.2 | 0.63 | -0.22 | 1.28 | 0.31 | -0.28 | -0.58 | -1.71 | -1.3 | -0.7 | -2.82 | -3.02 | -0.66 | 0.76 | -0.4 | 1.64 | -1.34 | -1.09 | - | -0.33 | -1.0 | -1.73 | 0.38 | -1.36 | -2.83 | -0.38 | -0.18 | -0.48 | -0.56 | -1.49 | -0.09 | 1.25 | 0.98 | -0.36 | -0.39 | -1.27 | -1.45 | -1.51 | -0.49 | -0.93 | -0.16 | -0.41 | -1.71 | -1.65 | -2.18 | -1.07 | -1.25 | -0.41 | |
| - | - | - | 5.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.37 | -1.27 | 2.53 | 5.17 | -3.46 | -2.75 | -1.62 | -1.38 | -2.01 | -3.12 | - | - | -4.18 | -1.42 | -2.65 | -2.04 | -3.61 | -3.58 | -0.87 | -2.36 | -2.19 | -0.15 | -3.56 | -1.94 | -3.49 | -0.35 | -3.4 | -2.47 | -1.36 | -5.66 | -3.23 | -4.09 | -2.4 | -1.92 | -2.22 | -2.59 | -1.06 | 0.44 | -1.16 | -2.03 | -3.34 | -2.37 | -2.04 | -5.52 | -1.9 | -2.13 | -2.54 | -2.91 | -3.56 | -2.64 | -2.53 | -3.35 | -5.51 | -2.16 | |
| -1.96 | -1.91 | 2.73 | 5.46 | -6.0 | -5.15 | -6.75 | -2.24 | - | -0.09 | -1.99 | - | - | -3.14 | -3.93 | -4.03 | - | -3.9 | - | - | - | - | - | -3.51 | - | -5.07 | - | -5.96 | -3.32 | -5.94 | -4.76 | -3.35 | -3.83 | -3.79 | -2.85 | -5.81 | - | -3.44 | -6.09 | - | - | -4.98 | -3.57 | -5.96 | - | - | -4.4 | -4.44 | -5.61 | -5.68 | - | - | - | - | |
| -2.06 | - | - | 5.74 | - | -3.48 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.73 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | 5.73 | -2.54 | -2.68 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.41 | - | - | - | - | - | - | -2.29 | - | - | - | - | - | - | - | - | - | |
| - | - | - | 5.75 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.71 | - | -0.12 | 5.71 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.33 | - | - | 5.5 | - | -1.23 | -3.27 | - | - | - | - | - | -0.94 | - | -0.34 | - | - | -0.5 | 0.63 | - | 0.89 | - | -1.6 | - | -2.11 | -2.76 | - | - | - | - | - | - | - | - | -2.58 | - | - | -2.68 | -2.66 | - | -2.55 | - | -2.82 | - | - | - | -2.76 | -1.72 | - | -2.38 | - | - | -2.42 | - | |
| - | - | 2.38 | 5.38 | - | - | -2.12 | 1.26 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.79 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.69 | - | - | - | -0.03 | - | - | - | - | - | - | |
| - | - | - | 5.16 | 2.91 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.13 | 1.62 | - | - | - | - | - | - | 1.67 | - | - | - | - | - | - | - | - | - | |
| 0.49 | -0.59 | 1.26 | 4.76 | -2.33 | -1.13 | -0.82 | - | - | - | -1.27 | - | -1.66 | -0.42 | -2.25 | - | -2.17 | - | -0.01 | -1.89 | - | 0.8 | -2.21 | -2.11 | -1.15 | 0.45 | -0.81 | -2.21 | -1.27 | -3.01 | -1.55 | -1.45 | -0.59 | -1.82 | -0.45 | -0.07 | 0.6 | 1.46 | 1.0 | -1.42 | -1.9 | -0.99 | -2.87 | -2.71 | -0.2 | -4.15 | -3.37 | -4.3 | -2.59 | - | - | -1.69 | -3.85 | -3.97 | |
| -4.46 | - | -0.84 | 5.1 | -2.83 | -0.82 | 0.68 | -0.11 | -0.74 | -1.86 | - | -0.8 | - | 0.41 | - | -1.3 | - | -2.54 | 0.82 | - | - | 0.31 | -3.05 | -2.22 | -1.93 | -1.25 | -1.78 | -2.04 | -0.26 | -2.02 | -3.3 | -1.62 | -1.35 | -0.86 | -4.29 | -2.71 | -1.63 | 0.15 | -0.2 | -2.43 | -2.78 | -0.58 | -2.65 | -3.38 | -1.55 | - | -1.07 | -3.54 | -3.34 | -2.71 | -2.79 | -4.15 | -3.02 | -2.55 | |
| - | - | - | 5.57 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.71 | - | - | - | - | - | - | 1.71 | - | - | - | - | - | - | - | - | - | |
| - | - | - | 5.57 | 1.95 | -2.03 | - | - | - | - | - | - | 0.22 | 0.44 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.43 | -6.1 | - | 5.11 | -1.57 | -2.1 | -2.23 | -3.92 | -2.97 | -5.79 | -4.51 | -4.61 | -0.44 | -4.89 | -4.21 | -3.84 | -3.56 | -3.36 | -4.99 | -1.66 | -1.56 | - | -1.4 | -2.32 | -3.68 | 1.16 | -0.65 | -1.82 | -2.06 | -1.82 | -4.56 | -3.85 | -3.08 | -3.12 | -2.42 | -2.72 | 0.92 | 0.62 | 1.53 | -0.44 | -4.34 | -1.31 | -1.97 | -3.32 | -1.27 | -3.2 | -2.27 | -2.07 | -1.33 | -1.94 | -2.03 | -1.86 | -1.4 | -1.38 | |
| 0.03 | - | - | 5.53 | 1.97 | -1.27 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.2 | - | - | - | - | - | - | - | - | - | - | - | - | 0.54 | |
| - | - | - | 5.44 | - | -2.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.97 | - | - | - | - | - | - | - | - | - | - | 1.38 | 1.81 | 0.24 | - | - | - | - | - | - | 0.28 | - | - | - | - | - | - | - | |
| -0.39 | -2.25 | -2.65 | 5.36 | -8.82 | -2.37 | -1.62 | -2.17 | -2.35 | -3.07 | -3.03 | -2.4 | -2.98 | -2.5 | -4.51 | -4.14 | -4.56 | -4.08 | -2.05 | -2.96 | -3.52 | - | -2.22 | -2.31 | -2.53 | -2.22 | -2.24 | -1.56 | -1.33 | -1.3 | -2.08 | -2.63 | -1.61 | -1.88 | -1.9 | -2.1 | -1.62 | -1.73 | -1.57 | -1.16 | -1.96 | -2.09 | -1.73 | -1.34 | -1.11 | -1.68 | -1.59 | -1.64 | -2.15 | -1.44 | -1.71 | -1.54 | -1.89 | -2.11 | |
| -0.72 | - | 0.7 | 4.41 | 1.19 | -0.03 | -0.83 | 0.57 | - | 1.9 | 1.24 | 1.45 | - | 0.18 | -0.13 | 1.11 | - | - | - | - | - | - | -2.99 | - | - | -2.29 | -1.4 | - | - | -0.86 | - | 1.5 | - | -2.0 | 0.33 | -1.99 | -0.68 | 0.93 | -0.64 | 1.22 | - | - | -1.28 | - | -1.07 | - | - | - | - | - | - | - | - | - | |
| -5.79 | - | -2.28 | 5.7 | -0.97 | -8.73 | - | - | - | -2.55 | - | - | - | - | - | - | - | - | - | -3.25 | - | -1.99 | -6.06 | -4.64 | - | -3.24 | -4.65 | -5.25 | - | - | - | -4.33 | - | -3.46 | -5.3 | -3.21 | -4.38 | -4.21 | - | - | - | - | - | -5.35 | -4.3 | - | - | - | - | - | - | - | -4.88 | -5.01 | |
| - | - | - | 5.65 | - | - | - | - | - | - | - | - | - | - | - | 1.97 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 1.58 | -1.16 | 1.38 | 5.5 | -3.4 | -3.55 | -4.0 | - | - | - | - | - | - | -3.32 | - | - | - | - | - | -1.05 | - | - | -3.23 | - | - | -3.48 | -2.75 | - | - | - | - | - | - | - | - | - | -1.93 | -3.26 | - | -2.28 | - | -0.23 | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.27 | - | 3.02 | 5.51 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | 4.85 | 2.34 | - | -0.87 | - | - | - | - | - | - | 1.31 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.43 | 0.95 | -0.08 | - | - | 1.44 | - | - | 0.78 | - | 0.5 | - | - | - | - | 0.68 | - | 1.61 | - | - | -0.08 | - | |
| -1.7 | -1.22 | 0.33 | 5.09 | -3.39 | -1.63 | -1.77 | - | - | - | - | - | - | -0.41 | - | - | - | - | - | -0.88 | - | - | -0.85 | - | -1.74 | -0.37 | -1.06 | -0.85 | -2.78 | -3.29 | - | -1.66 | -1.62 | -3.15 | - | -0.81 | 1.44 | 1.25 | 0.55 | -1.19 | -0.69 | 0.27 | -2.53 | -2.19 | -3.19 | - | -0.74 | -3.35 | -0.75 | -0.99 | -3.21 | -1.95 | -2.84 | -2.96 | |
| - | - | - | 5.61 | - | -1.7 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.39 | - | - | - | - | -1.4 | - | - | - | - | -1.37 | - | - | - | -1.0 | - | - | -1.46 | - | -1.0 | - | - | -1.28 | - | - | - | - | - | - | 0.69 | -1.36 | -4.11 | |
| - | - | - | 5.57 | 2.43 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.04 | -1.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -5.61 | -4.85 | -2.22 | 5.71 | -7.89 | -4.28 | 0.14 | - | - | - | - | -3.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | -5.39 | - | - | - | - | - | -6.82 | - | - | - | - | -6.99 | -4.27 | -6.83 | -6.73 | - | - | -5.41 | - | -5.15 | - | -6.86 | - | - | - | -6.4 | - | - | -6.4 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.