Heatmap: Cluster_126 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegoniophore (female)
Antheridiophore (male)
Antheridium (male)
Sperm
Sporeling
Thallus
Thallus (vegetative)
Thallus (MpPAP1OX-1)
Thallus (Tak1-2)
Thallus (MpPAP1OX-3)
Thallus (MpPAP1OX-2)
Thallus (Tak1-3)
mid rib (male)
Gametophyte
Gemmaling (female, hpt2040)
Gemmaling (male, hpt2040)
Gemmaling (BC3-38)
Gemmaling (Tak1)
Gemmaling
Gemma cup
gemma cup (male)
Aseptically grown rhizoids, thalloid, gemmae
Control
Cold (3°C)
Dark (3 days)
Heat (33°C)
Light (435 uEm-2s-1)
Osmotic (100 mM mannitol)
Nitrogen deficiency (0 mM KNO3)
Salt (40 mM NaCl)
Cold-Dark
Cold-Light
Cold-Mannitol
Cold-Nitrogen deficiency
Cold-Salt
Heat-Dark
Heat-Mannitol
Heat-Nitrogen deficiency
Heat-Salt
Light-Salt
Mannitol-Dark
Mannitol-Light
Mannitol-Nitrogen deficiency
Nitrogen deficiency-Dark
Nitrogen deficiency-Light
Salt-Dark
Salt-Mannitol
Salt-Nitrogen deficiency
ZT2 (2 hours after light)
ZT6 (6 hours after light)
ZT10 (10 hours after light)
ZT14 (2 hours after dark)
ZT18 (6 hours after dark)
ZT22 (10 hours after dark)
4.49 - - 3.1 - -2.39 -1.0 - - - - - - - - - - - - - - - - - - - - 1.68 - - - 1.94 - 0.08 1.07 - - - - - - - 0.76 - - - 1.47 - 1.67 0.04 1.17 - 0.18 -
3.28 -1.01 -0.44 0.24 0.42 -0.05 -0.2 -0.81 -0.37 -0.35 -0.32 -1.65 -2.33 0.7 -0.36 -0.84 -0.64 -0.47 -0.03 -0.44 -1.35 0.97 -1.86 0.15 -2.03 0.3 -0.84 -0.73 0.02 -1.52 -0.66 -0.34 0.3 -0.24 0.09 1.31 1.01 1.37 0.76 -0.5 -0.8 0.5 -0.63 -1.88 0.13 -2.52 -0.95 -0.86 -0.88 -1.83 -2.78 -1.97 -1.23 -0.9
2.32 - - - - - - - - - - - - 3.39 - - - - - - - - 3.06 2.24 - - - - - - 3.16 0.97 1.13 1.09 - - - 1.07 - - - - - 2.11 1.02 - 0.89 - - - - - - -
3.04 1.23 -2.64 -5.94 -0.99 0.22 -0.83 -2.38 1.06 2.45 0.22 2.65 1.63 0.81 -0.79 -0.39 -1.01 0.15 3.15 1.04 -0.07 -1.39 -2.11 -5.94 -7.89 -4.35 0.02 -1.41 -3.41 -3.04 -6.21 0.71 -4.34 -5.53 -5.45 -8.46 -5.01 -5.33 -5.3 -1.72 -4.4 -1.12 -2.43 -6.7 -1.68 -6.81 -2.51 -1.81 -3.89 -4.32 -4.2 -4.8 -4.68 -5.04
3.62 0.23 - 3.16 - -4.98 - - - - - - - -1.77 - - - - - - - - -1.15 1.03 - 1.09 1.93 -1.18 - -1.14 0.85 -0.34 0.95 0.84 -0.25 -1.23 - 2.68 -0.45 -0.31 - 0.18 -0.43 -0.31 -0.36 -1.19 -0.4 -0.37 -1.09 - - -0.95 - -
4.7 - 2.87 4.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.52 - - - - - - - - - - - - - - - -
3.61 - - 3.29 - -2.47 - - - - - - -0.36 2.84 - - - - - - 1.73 - -0.34 -0.14 -1.1 - - 0.2 -0.03 0.72 - -0.53 0.81 1.84 - - -0.06 - - - - 0.98 -0.78 - -1.47 - 0.0 0.02 -1.43 -1.58 -0.48 -0.21 -1.28 -
3.63 1.71 -3.17 0.18 -1.81 0.58 0.09 -0.72 -0.36 -0.75 -0.93 -0.41 -0.44 0.6 0.55 0.56 -0.08 -0.21 - -0.9 - -1.3 0.02 -1.43 -0.2 0.57 -1.11 0.2 -0.97 -0.34 -2.89 -1.43 -0.79 -1.13 -1.25 -1.2 0.68 0.13 0.16 -0.97 -0.69 -0.34 0.18 -1.6 -0.75 -1.68 0.0 -0.77 -0.46 -0.62 -0.68 0.09 -0.48 -0.87
1.85 1.12 -1.82 2.09 -0.03 0.18 -1.48 -0.08 0.29 0.27 -0.08 -0.77 -2.8 -1.28 -1.23 -2.27 -1.72 -3.28 -0.15 -0.25 -0.31 -1.66 -0.74 -1.85 -1.7 1.27 -0.7 -0.5 -1.4 -0.85 -2.11 -0.38 -1.62 -1.1 -0.83 1.01 1.77 1.47 1.12 -0.89 1.02 0.41 -1.6 -0.15 -0.21 0.71 -0.74 -0.39 -1.1 0.16 0.12 -1.12 -0.87 -0.68
2.8 - 0.07 3.36 -1.25 -0.16 -0.39 - - - 0.49 1.12 - -1.48 - - 0.58 - - - - 0.23 -3.35 - 0.69 1.41 -0.19 -2.49 -0.55 - - - - -0.02 - -0.74 0.86 2.55 1.55 0.12 0.87 - -0.67 - 0.57 0.25 -1.55 - 0.41 - - -1.14 -1.32 -
3.02 0.8 3.26 3.92 -0.47 -3.56 - - - - - - - - - - - - - - - - - - -0.55 0.27 0.73 - -0.82 - - 0.85 -1.03 -0.93 0.53 -0.02 -1.24 0.81 1.15 - 0.39 - -1.4 -0.11 - - - 0.76 - - - -0.83 - -
5.34 - - 3.04 - -0.85 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.26 - - - - - - - - - - - - - - - -
5.11 1.7 -5.95 -3.53 -8.41 -0.72 -0.02 -0.55 -3.0 -2.04 -2.29 -2.47 -1.71 0.56 -1.81 -2.17 -1.99 -1.41 -4.85 -2.94 -2.37 -2.55 -2.23 -1.64 -9.24 -4.58 -2.56 -0.3 -1.67 -0.57 - -2.5 -0.1 -1.66 -0.57 - -3.19 -3.99 -3.31 -0.29 - -0.77 -0.49 -7.93 -1.17 - 0.09 -1.17 -2.03 -2.96 -4.36 -2.37 -4.34 -5.29
5.2 - - 3.62 - -2.46 -2.02 - - - - - - - - 0.75 - 0.51 - - - - - - - - - - -0.48 - - - - - - - - -2.5 -2.34 - - - - - - - - - - - - - - -1.99
5.12 0.75 - 3.81 - - - - - - - - - - - - - - - - - - - - - - - - - -1.08 - 0.4 - - - - - -1.1 - -1.11 - - -1.3 - - - - - - -1.34 - - - -
3.7 -0.29 -0.68 -1.15 -1.34 -0.12 -1.51 -1.33 0.22 0.64 -1.31 -1.42 -0.22 0.12 -0.02 -1.11 0.38 -0.7 -0.76 -0.04 0.05 - 0.05 -1.06 -1.71 0.61 0.04 0.65 0.88 0.03 -2.44 -0.94 -0.86 -0.9 -1.4 -2.38 0.21 0.67 0.1 -1.25 -1.58 -1.01 -0.0 -2.9 -0.18 -2.02 0.07 -0.18 -0.52 -0.44 -0.76 0.26 0.49 -0.88
3.08 0.49 1.94 1.81 -0.74 -0.25 -0.8 -0.32 - -0.1 -0.23 -0.01 -0.11 -0.91 -2.63 -1.72 -2.72 -1.03 -1.39 -0.73 1.45 0.42 -0.44 0.49 -0.74 -0.13 -1.11 -1.37 -0.41 -0.64 -0.14 0.5 0.2 -0.4 0.09 -0.41 0.23 1.09 -0.06 -0.11 -2.6 -2.66 -0.66 -1.35 0.2 -1.95 -1.09 -1.08 -2.04 -0.98 -0.9 -0.47 -1.37 -1.48
5.55 -2.95 - 2.7 - -5.56 -4.13 - - - - - - -3.8 - - - - - - - - - - - - - - - - - -2.46 - - - - - - - - - -5.01 - - - - -4.16 - - - - - - -
5.24 - 2.0 3.01 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.73 - -0.06 - - - - - - - - - - - - - - - - - - - -
5.1 - 0.82 3.67 -0.89 -2.22 - - - - - - - - - - - - - - - - - -1.32 - - - -1.79 -1.44 - - - -0.83 - -0.23 - - - - - - -0.99 -2.17 - -1.86 - -2.01 -0.4 - - - - - -
4.89 -0.89 -0.87 2.68 -0.81 -1.73 -1.43 -1.86 - - -1.61 - - -1.57 -0.9 -1.68 -2.51 -2.52 - - - -0.28 -4.01 -3.93 - 0.31 -3.05 -1.97 -3.87 - -2.94 -0.69 -4.6 -3.51 -2.9 0.09 0.24 2.26 1.18 - - -2.7 -3.9 -3.66 -3.04 - - - -4.54 - -4.54 - -4.51 -4.32
3.74 2.67 -4.34 -1.37 - 0.37 1.28 -2.88 -1.94 -2.67 -2.22 -1.58 -1.36 2.22 -1.1 -1.77 -0.17 0.37 -0.26 -3.28 -2.7 -2.88 0.49 0.18 -0.59 -0.23 -1.27 -0.81 -1.43 -2.1 -0.58 -0.08 -2.12 -1.53 -1.53 0.61 -2.17 -2.25 -3.27 -2.33 -2.15 -2.5 -1.24 0.48 -1.45 -1.63 -6.27 -1.74 -0.77 -0.01 0.05 0.42 0.41 -0.3
2.73 0.28 1.32 -1.57 -2.58 -0.13 0.27 -1.08 - -1.3 -0.54 -0.78 -2.34 0.08 -0.29 0.26 0.05 -1.94 - -3.04 -1.9 -0.09 -0.79 0.15 -0.3 0.43 -1.45 -1.27 0.35 0.32 -0.2 0.0 -2.01 1.2 0.05 0.24 -0.04 0.2 -0.43 -0.18 0.29 0.01 -0.17 0.48 -0.64 -1.19 0.3 -0.49 -0.23 -0.51 -0.32 0.01 1.2 1.15
4.44 -2.02 - 1.49 -2.51 -0.2 -0.04 -3.04 - -2.27 - - -1.02 -0.75 1.16 1.69 0.99 1.79 -0.22 -1.13 -0.69 - -1.38 -2.95 -5.19 0.36 -4.2 -1.08 -2.03 -3.07 -3.69 -2.07 -4.66 -4.08 -4.68 -4.65 0.2 0.26 0.85 -1.94 -3.16 -1.19 -3.39 -2.5 -2.26 -2.23 -1.3 -1.33 0.01 -0.29 -1.38 -1.18 -1.59 -1.46
3.83 - -0.52 3.54 -0.96 -0.22 -1.25 -2.86 - - - - -0.56 -1.88 -1.15 -3.32 -0.96 -2.14 -2.36 -1.7 -1.1 -1.87 -0.54 -1.02 -0.98 1.4 - -1.75 -1.33 -1.43 -0.58 -1.21 -2.73 -3.5 -3.51 1.35 -0.16 1.47 0.72 -3.29 -0.83 -2.86 -2.52 0.3 -0.97 -1.32 -2.55 -3.67 -0.94 -1.18 -1.57 -0.57 0.12 -0.04
3.01 -0.57 1.5 0.12 -2.02 0.0 -0.71 -0.19 -2.04 0.5 -0.09 -0.64 -1.73 0.22 -0.79 -0.19 -0.18 0.17 -0.78 -2.08 -2.22 0.4 -0.36 -0.14 -1.87 0.29 -0.97 0.08 0.08 -0.64 -1.7 0.58 -0.16 0.58 0.01 0.12 0.84 1.16 0.68 -0.33 -1.15 -0.1 -0.18 -1.49 -0.48 -1.82 -0.34 -0.58 -0.6 -0.59 -0.86 -0.4 -0.7 -0.72
4.64 3.97 - 3.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
5.53 - - 0.69 -3.14 -3.0 - - - - -0.71 - - -3.1 - - - - - - - - -2.8 0.45 - - - -2.91 -2.81 - - -2.07 -0.39 -2.88 0.95 - -3.25 - - - - - - - -2.05 - - - - - - -2.7 - -
4.79 - - 4.22 - - -0.34 - - - - - - - - - - - 2.67 - - - - - - - - - - - - - - - - - - -0.81 - - - - - - - - - - - - - - - -
5.1 - - 1.9 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.95 - - - - - 3.61 - - - - - - - - - - - - - - - -
5.36 - - 3.65 -4.72 - - - - - - - - - - - - - - - - - - - - -3.81 - - - - - - - - - - -2.29 - - - - - - - - - - - - - - - - -
3.4 - 2.55 3.4 2.72 -1.32 1.14 - - 2.84 - - - -0.29 - 0.96 - - - - - - - - - - - -1.15 -0.8 - - - -0.24 - - - -1.48 - - - 0.75 0.99 - - - - 0.66 - - - -1.22 - - -
4.06 - - 2.15 -1.9 0.7 -0.53 - 0.63 0.5 -1.64 -1.01 -0.21 -2.28 - - - - -1.39 -1.27 -0.13 - -2.22 -3.12 -4.24 -0.28 -1.02 0.2 -0.92 1.37 -1.92 -2.3 -1.22 -1.71 -0.93 -1.35 1.0 1.57 0.77 0.86 -0.7 0.17 -0.24 -0.56 -0.78 -0.28 -1.55 -0.63 -1.92 -1.98 -1.87 -1.54 -2.8 -1.97
3.98 - - 3.87 - -0.92 2.53 - - - - - - 1.27 - - - - - - - - - - - - - - - - - 1.59 - - - - - - - 1.64 - 2.5 - - 1.6 - - - - - - - - -
4.2 2.7 - 3.14 - - - - - - - - - - - - - - - - - - - - - - - - - 1.33 - - - - 1.12 - 1.93 - 2.95 - - - 0.86 - - - - - - - 1.15 - - -
5.13 - - 4.22 -1.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
5.09 - 2.11 3.63 1.13 - - - - - - - - -2.6 - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.61 - - -2.57 - -1.06 - - - - - - -
3.28 - - 0.37 -4.11 0.03 -0.7 -2.9 - -4.08 - - -1.82 -3.45 -0.37 0.44 0.94 0.86 - -2.31 -2.14 - 0.87 -1.03 - 0.9 -0.75 0.74 -1.43 0.7 -1.78 -1.53 -0.62 -2.08 -0.44 -5.54 2.01 -0.39 2.01 0.58 -3.65 0.62 1.03 -4.92 -1.15 -3.24 1.27 0.25 0.15 -0.45 -0.47 0.22 -0.29 -0.04
3.84 2.35 - 0.02 -0.93 0.45 - - - - - - - 0.25 - - - - - - - - -0.55 -0.57 0.44 - - - 0.04 -1.16 - 0.84 -0.13 0.48 - 1.28 0.95 -0.39 0.27 - 2.62 - 0.22 -0.07 - 0.03 - -0.2 - - 1.2 -0.95 0.23 0.74
4.49 - - 3.38 - -1.36 -0.89 - 2.41 - - - - - - - - - - - - - -0.27 -0.56 -0.62 1.42 - -0.86 - - - - - - - - 1.13 1.69 - - - -1.11 -1.26 - -1.07 0.07 - - -0.94 - -0.89 -0.71 - -
4.3 - - 4.75 2.6 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.48 - - - - - - - - - - - - - - - -
5.45 0.23 - 3.12 -2.82 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.05 - - - - - - - - - - -
3.7 - 0.78 2.88 - -1.07 0.52 - - - - - 0.38 -2.06 0.19 -0.19 0.92 - - - - - -1.77 0.0 -1.61 1.37 -0.31 -1.92 0.41 - - -0.01 -1.98 0.7 0.83 1.43 -2.12 1.14 -1.08 - -0.95 -0.48 0.78 1.22 0.03 -1.0 - -0.52 - - - - -1.87 -
5.19 - 0.04 2.31 0.98 -2.08 -5.48 - -1.14 - - 0.39 - 0.41 - - - - - 0.09 0.26 - - - -4.23 - -1.64 - - - -2.68 -4.78 - - - -2.41 - - - - 1.01 -3.86 - -2.72 - -0.29 - - - - - - - -
3.21 - - 4.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.03 - - - - - - 1.58 - - - - - - - - -
5.29 - - 2.81 2.15 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.02 - - - - - - - - -1.09 - - - -0.01 - - -
4.59 - - -1.71 -2.91 -1.81 2.16 - - 1.28 0.76 - -0.98 2.76 - - - - - -0.85 - - -2.46 -4.16 -1.27 -3.1 -1.98 0.1 -3.15 -1.64 - - 0.01 -1.88 -2.87 - 0.22 -1.45 -4.76 -1.3 - -2.36 1.4 0.64 -3.66 - 0.89 -2.03 - -3.62 -4.52 - -3.46 -
4.59 - - -1.71 -2.91 -1.81 2.16 - - 1.28 0.76 - -0.98 2.76 - - - - - -0.85 - - -2.46 -4.16 -1.27 -3.1 -1.98 0.1 -3.15 -1.64 - - 0.01 -1.88 -2.87 - 0.22 -1.45 -4.76 -1.3 - -2.36 1.4 0.64 -3.66 - 0.89 -2.03 - -3.62 -4.52 - -3.46 -
4.7 - - 2.73 -2.05 -0.77 -0.34 - - - - - - - - - - - 1.94 - - - -1.48 0.56 - 0.99 - - 0.58 - - - 0.68 - -0.86 - -0.05 1.04 -0.02 0.18 - - -1.06 - 0.11 - -0.0 - - - - - -0.41 -
5.17 -1.06 - 1.76 0.1 -1.54 -1.36 - -1.07 -1.86 -1.93 -1.13 -3.13 -0.12 -2.72 -2.69 -4.1 -2.24 - -4.04 -2.83 -1.02 -2.18 -2.53 -4.88 -1.18 -2.38 -2.38 -1.93 -3.77 -2.34 -2.02 -2.57 -1.69 -2.06 -4.22 -0.96 -0.69 -1.07 -1.35 -0.64 -2.58 -1.55 -2.47 -1.71 -1.52 -1.78 -2.01 -2.15 -2.86 -2.78 -1.88 -2.27 -2.32
2.14 -21.73 1.9 - -1.83 1.36 1.13 -1.53 2.95 1.83 0.78 -24.18 1.38 2.14 -16.06 1.16 2.07 1.72 -17.0 1.68 -17.14 2.91 - - - - - - - - - - - - - -5.8 - - - - - - - - - - - - - - - - - -
3.71 -1.17 -3.44 2.82 0.61 -1.52 -2.68 -2.57 0.37 -2.24 -1.73 -0.36 -1.51 -2.58 -3.15 -2.29 -3.22 -3.33 - - -2.81 -2.57 -0.73 -2.01 -1.15 0.78 -0.49 -0.3 1.25 -1.01 -2.07 -1.95 -0.42 -0.53 -1.1 -0.8 1.22 2.17 0.66 -0.53 -0.71 -0.12 -0.67 -0.82 0.73 -1.38 -1.73 -0.5 -1.08 -2.12 -1.41 -2.38 -1.94 -1.56
5.63 - - 0.28 - - - - - - - - - - - - - - - - - - -0.72 - - - - - - - - - - - - - 0.82 - - - - - -0.24 - - - - - - - - - - -
5.13 - 4.16 0.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
4.97 - - 3.14 -0.19 0.98 - - - - - - - - - 0.05 - - - - - - -2.55 -1.23 - - - -0.64 0.84 - - 0.28 -1.61 0.4 0.35 - -1.82 -0.91 -1.84 - - -0.77 -1.92 - - - - -0.75 -1.64 - - - - -
3.77 - - 4.2 0.29 1.16 - - - - - - - - - - - - - - - - - - - - - - - 1.88 0.82 - - 0.97 - 0.84 2.17 - - - - - 1.64 0.79 - - - - - - - - - -
3.64 - - 2.94 0.88 0.0 - - - 1.86 - - - - - - - - - - - - 0.04 - - 0.53 0.37 0.84 - - - - -0.25 - - - -0.5 0.56 1.11 - - - - 2.59 2.01 - - - -0.01 - 1.81 - - 1.03
4.52 - - 2.92 -12.96 -1.91 2.15 - - - - - - 3.89 - - - - - 1.94 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
5.71 - - 0.77 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
4.68 - - 2.67 - 1.69 0.93 - - -0.19 - 2.45 -0.09 0.98 - - - - - 1.59 - - - - - -1.76 - - -0.99 - - -1.7 - 0.2 - - -1.95 -0.86 - -1.07 - - -1.43 -1.58 - - - - - - -2.69 - -2.53 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.