Sequence Description Alias PCC hrr AT3G54050 high cyclic electron flow 1 0.932436251751344 4 AT5G43750 NAD(P)H dehydrogenase 18 0.9278965024327797 2 AT3G12780 phosphoglycerate kinase 1 0.926387891225716 4 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit 0.9253531241024484 5 AT2G39470 PsbP-like protein 2 0.9191696259115644 5 AT1G45474 photosystem I light harvesting complex gene 5 0.9178209276534217 6 AT1G09340 chloroplast RNA binding 0.9166479981875626 7 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.9166115381507848 8 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.9158037119361402 9 AT5G36700 2-phosphoglycolate phosphatase 1 0.9158037119361402 10 AT3G63140 chloroplast stem-loop binding protein of 41 kDa 0.9138236875750626 11 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.9131099824499099 12 AT5G07020 proline-rich family protein 0.9069591810669202 13 AT3G55800 sedoheptulose-bisphosphatase 0.9063977451326981 14 AT3G02730 thioredoxin F-type 1 0.9036733234365832 15 AT4G37930 serine transhydroxymethyltransferase 1 0.899323920936602 16 AT1G15980 NDH-dependent cyclic electron flow 1 0.8990370909647031 17 AT4G03280 photosynthetic electron transfer C 0.8970188347660677 18 AT3G46780 plastid transcriptionally active 16 0.8959587585912415 19 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 0.8945371106709743 20 AT1G70760 inorganic carbon transport protein-related 0.8934745237317905 21 AT1G03680 thioredoxin M-type 1 0.8934716671592199 22 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8906934127719316 23 AT1G32080 membrane protein, putative 0.8898275845175194 24 AT5G35630 glutamine synthetase 2 0.889736092562501 25 AT4G04640 ATPase, F1 complex, gamma subunit protein 0.8886325187343536 26 AT1G73060 Low PSII Accumulation 3 0.8883607005279222 27 AT1G11860 Glycine cleavage T-protein family 0.887765323910993 28 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.8867462107293765 29 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8852620047841492 30 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8851160749648935 31 AT2G20890 photosystem II reaction center PSB29 protein 0.8844052835628735 32 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.8828395754192434 33 AT1G32060 phosphoribulokinase 0.881762827501479 34 AT1G44575 Chlorophyll A-B binding family protein 0.8797874572992727 35 AT1G50320 thioredoxin X 0.8797032524917449 36 AT3G59780 Rhodanese/Cell cycle control phosphatase superfamily protein 0.8768926848537074 37 AT1G14150 PsbQ-like 2 0.8739354739167717 38 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8737929325000069 39 AT4G02530 chloroplast thylakoid lumen protein 0.8731261912292054 40 AT3G14415 Aldolase-type TIM barrel family protein 0.8728084232249872 41 AT5G03880 Thioredoxin family protein 0.8726001338074577 42 AT1G20340 Cupredoxin superfamily protein 0.8720250825092855 43 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 0.8714316696686841 44 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8710586436811568 45 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.8704814308371587 46 AT1G19150 photosystem I light harvesting complex gene 6 0.8698583191426411 47 AT5G16710 dehydroascorbate reductase 1 0.8688489441170961 48 AT3G01500 carbonic anhydrase 1 0.8687645593160793 49 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region 0.8682844643282214 50 AT1G16880 uridylyltransferase-related 0.8674796022772016 51 AT4G21210 PPDK regulatory protein 0.8672075101783726 52 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8667045722575117 53 AT1G74730 Protein of unknown function (DUF1118) 0.8659831308154062 54 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8659775621158271 55 AT5G06290 2-cysteine peroxiredoxin B 0.8642489017301429 56 AT1G31190 myo-inositol monophosphatase like 1 0.8636832820464044 57 AT2G46820 photosystem I P subunit 0.8632420539625397 58 AT2G32480 ARABIDOPSIS SERIN PROTEASE 0.8621766176024321 59 AT1G54780 thylakoid lumen 18.3 kDa protein 0.8621196329280004 60 AT4G22890 PGR5-LIKE A 0.860127908543586 61 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.8591727220806535 62 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.857321837189665 63 AT2G01110 Sec-independent periplasmic protein translocase 0.8559173593696554 64 AT1G03630 protochlorophyllide oxidoreductase C 0.854805354621586 65 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0.8540273735531039 66 AT2G35370 glycine decarboxylase complex H 0.8539033967718842 67 AT5G21430 Chaperone DnaJ-domain superfamily protein 0.8534324844709706 68 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) 0.8532981215851605 69 AT2G21530 SMAD/FHA domain-containing protein 0.8529610981678247 70 AT3G62030 rotamase CYP 4 0.8528488927659986 71 AT4G09650 ATP synthase delta-subunit gene 0.8522568395506761 72 AT3G55330 PsbP-like protein 1 0.852092660243299 73 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.850888823789834 74 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8507289028655812 75 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8502574750188131 76 AT4G39710 FK506-binding protein 16-2 0.8495254436145208 77 AT5G20140 SOUL heme-binding family protein 0.8493060184212686 78 AT4G21280 photosystem II subunit QA 0.8483119965190128 79 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit 0.8478608560246844 80 AT5G38420 Ribulose bisphosphate carboxylase (small chain) family protein 0.8472897092915471 81 AT1G06680 photosystem II subunit P-1 0.8461658393109797 82 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). 0.8457641113886899 83 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.8447203323341053 84 AT1G63970 isoprenoid F 0.8435265009880355 85 AT1G76450 Photosystem II reaction center PsbP family protein 0.8435180291609606 86 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein 0.8433281547024953 87 AT1G77490 thylakoidal ascorbate peroxidase 0.8427892916100159 88 AT5G13410 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8424437624294452 89 AT5G38660 acclimation of photosynthesis to environment 0.8414541390960057 90 AT3G50820 photosystem II subunit O-2 0.8411246231738387 91 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8406097447816101 92 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.8403319045565354 93 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.839902226343817 94 AT3G16250 NDH-dependent cyclic electron flow 1 0.8397854666553892 95 AT1G67090 ribulose bisphosphate carboxylase small chain 1A 0.8388558332369057 96 AT4G28740 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8377670166905886 97 AT1G64770 NDH-dependent cyclic electron flow 1 0.8372176531871652 98 AT3G15360 thioredoxin M-type 4 0.837113063488973 99 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain family protein 0.8369480845426079 100