Sequence Description Alias PCC hrr AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit 0.944198164488948 3 AT1G09340 chloroplast RNA binding 0.9352814010601029 4 AT3G55800 sedoheptulose-bisphosphatase 0.9345765204612465 3 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 0.932436251751344 4 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.9261164681223203 5 AT3G63140 chloroplast stem-loop binding protein of 41 kDa 0.92150281604956 6 AT1G45474 photosystem I light harvesting complex gene 5 0.9210921650646692 7 AT1G11860 Glycine cleavage T-protein family 0.9134081637083774 8 AT1G15980 NDH-dependent cyclic electron flow 1 0.9124160704705963 9 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.9122069078619806 10 AT5G36700 2-phosphoglycolate phosphatase 1 0.9122069078619806 11 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.912158163637139 12 AT3G12780 phosphoglycerate kinase 1 0.9112911110922208 13 AT2G39470 PsbP-like protein 2 0.909866930798495 14 AT5G07020 proline-rich family protein 0.9098188805777777 15 AT5G43750 NAD(P)H dehydrogenase 18 0.9079334337603084 16 AT4G03280 photosynthetic electron transfer C 0.9058814633243253 17 AT3G46780 plastid transcriptionally active 16 0.9046063778934025 18 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.900743557152125 19 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8991076871471896 20 AT4G37930 serine transhydroxymethyltransferase 1 0.8980501065762599 21 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8978492256119769 22 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 0.8967364226145276 23 AT4G21280 photosystem II subunit QA 0.8962075172679161 24 AT1G44575 Chlorophyll A-B binding family protein 0.8955921560903223 25 AT5G35630 glutamine synthetase 2 0.8949303754606327 26 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8945297139165679 27 AT1G32080 membrane protein, putative 0.8941568120267545 28 AT3G01500 carbonic anhydrase 1 0.8920620968028108 29 AT1G64770 NDH-dependent cyclic electron flow 1 0.8915453455225981 30 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region 0.8878164701973831 31 AT4G02530 chloroplast thylakoid lumen protein 0.8828044884827645 32 AT4G09650 ATP synthase delta-subunit gene 0.8827959186931663 33 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit 0.882719320566497 34 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 0.8816704115852391 35 AT1G74730 Protein of unknown function (DUF1118) 0.8810888055102123 36 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8809809653798999 37 AT1G19150 photosystem I light harvesting complex gene 6 0.8797840172492699 38 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) 0.8786142235124014 39 AT4G04640 ATPase, F1 complex, gamma subunit protein 0.8763984326080804 40 AT1G32060 phosphoribulokinase 0.8760836647462038 41 AT2G46820 photosystem I P subunit 0.8725906927452826 42 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8709939856187043 43 AT3G59780 Rhodanese/Cell cycle control phosphatase superfamily protein 0.8673129064773434 44 AT4G20360 RAB GTPase homolog E1B 0.8663316151267795 45 AT5G03880 Thioredoxin family protein 0.8658859255682372 46 AT5G21430 Chaperone DnaJ-domain superfamily protein 0.8658424387208168 47 AT1G62750 Translation elongation factor EFG/EF2 protein 0.8649934003821136 48 AT5G20140 SOUL heme-binding family protein 0.8649452964253869 49 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.8642265413194405 50 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.8625953385991024 51 AT2G20890 photosystem II reaction center PSB29 protein 0.8622304049985627 52 AT1G76450 Photosystem II reaction center PsbP family protein 0.8621163935492531 53 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8613572490696323 54 AT1G20340 Cupredoxin superfamily protein 0.8613359342479786 55 AT1G64680 unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). 0.8610074543058523 56 AT1G77490 thylakoidal ascorbate peroxidase 0.8593944047180541 57 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein 0.8573319323205165 58 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8572480452419613 59 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.856282946361508 60 AT1G70760 inorganic carbon transport protein-related 0.8562329730082964 61 AT3G02730 thioredoxin F-type 1 0.8559392130532024 62 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8558304777554533 63 AT4G38970 fructose-bisphosphate aldolase 2 0.8537313027905921 64 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8526477933589522 65 AT1G50320 thioredoxin X 0.8519650702813027 66 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). 0.851779438320152 67 AT1G14150 PsbQ-like 2 0.8516620766549817 68 AT2G39730 rubisco activase 0.8509639109141417 69 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8507949349129627 70 AT5G08650 Small GTP-binding protein 0.8504442627419118 71 AT3G26710 cofactor assembly of complex C 0.8502684008887988 72 AT3G50820 photosystem II subunit O-2 0.850079945068557 73 AT4G21210 PPDK regulatory protein 0.8499677986033638 74 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.8498000321150563 75 AT4G09010 ascorbate peroxidase 4 0.8496466494462366 76 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8490781025385153 77 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.8488041157801104 78 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.848213010148783 79 AT5G42270 FtsH extracellular protease family 0.8472051908524507 80 AT5G16710 dehydroascorbate reductase 1 0.8470655292299808 81 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8468202746813532 82 AT1G18730 NDH dependent flow 6 0.845581825621815 83 AT5G06290 2-cysteine peroxiredoxin B 0.845121626804715 84 AT1G67090 ribulose bisphosphate carboxylase small chain 1A 0.8449673878774393 85 AT3G62030 rotamase CYP 4 0.8448234049114559 86 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.8438048977534011 87 AT1G03630 protochlorophyllide oxidoreductase C 0.8430297690378565 88 AT3G55330 PsbP-like protein 1 0.8427050691639698 89 AT1G06680 photosystem II subunit P-1 0.8420415932526765 90 AT1G50450 Saccharopine dehydrogenase 0.8417065845621339 91 AT1G31190 myo-inositol monophosphatase like 1 0.8412976147088257 92 AT4G22890 PGR5-LIKE A 0.8406893575433441 93 AT1G73060 Low PSII Accumulation 3 0.8396454450208435 94 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). 0.8396106460289605 95 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8383401485773695 96 AT1G16880 uridylyltransferase-related 0.8381840502801132 97 AT3G14420 Aldolase-type TIM barrel family protein 0.8380075850789165 98 AT1G60950 2Fe-2S ferredoxin-like superfamily protein 0.8373507660787147 99 AT4G39710 FK506-binding protein 16-2 0.8373436061819199 100