Sequence Description Alias PCC hrr AT3G62030 rotamase CYP 4 0.924077444603672 1 AT3G11630 Thioredoxin superfamily protein 0.8999961489349261 2 AT3G26060 Thioredoxin superfamily protein 0.8874372047960591 7 AT5G40950 ribosomal protein large subunit 27 0.879334968705966 24 AT1G09340 chloroplast RNA binding 0.8777012556433224 33 AT5G16710 dehydroascorbate reductase 1 0.8756375039666421 6 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8741329545761944 22 AT2G20890 photosystem II reaction center PSB29 protein 0.8722184417321249 15 AT5G43750 NAD(P)H dehydrogenase 18 0.871287113174212 54 AT4G02530 chloroplast thylakoid lumen protein 0.8650945932759644 33 AT1G03630 protochlorophyllide oxidoreductase C 0.86466623316879 12 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 0.8642489017301429 56 AT5G38410 Ribulose bisphosphate carboxylase (small chain) family protein 0.8629031983644809 13 AT1G74730 Protein of unknown function (DUF1118) 0.8616621006877153 39 AT1G32080 membrane protein, putative 0.8611389171681428 21 AT3G25920 ribosomal protein L15 0.8607364167771283 54 AT4G21280 photosystem II subunit QA 0.8591551625738397 31 AT2G48070 resistance to phytophthora 1 0.859090843674196 18 AT4G09010 ascorbate peroxidase 4 0.8582833475948222 26 AT1G73060 Low PSII Accumulation 3 0.8575974316093927 20 AT1G43560 thioredoxin Y2 0.85758540605786 25 AT1G11860 Glycine cleavage T-protein family 0.8569752848774779 44 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8566668786876505 38 AT5G13510 Ribosomal protein L10 family protein 0.8565317815964003 26 AT3G54210 Ribosomal protein L17 family protein 0.8563483936346493 32 AT1G67090 ribulose bisphosphate carboxylase small chain 1A 0.8531955237707836 26 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.8524181157882694 27 AT5G07020 proline-rich family protein 0.8513828985136396 41 AT1G32470 Single hybrid motif superfamily protein 0.8507300224161634 45 AT1G45474 photosystem I light harvesting complex gene 5 0.8505368042638168 59 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.849952098162712 53 AT5G38420 Ribulose bisphosphate carboxylase (small chain) family protein 0.8480224341818613 32 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.8478362025217311 33 AT1G44575 Chlorophyll A-B binding family protein 0.8475835201566743 39 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit 0.8462508075642254 62 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8456253449754176 67 AT3G54050 high cyclic electron flow 1 0.845121626804715 84 AT3G63140 chloroplast stem-loop binding protein of 41 kDa 0.8450269479739883 46 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein 0.8447444991480701 39 AT3G01500 carbonic anhydrase 1 0.8443229534903436 40 AT3G55800 sedoheptulose-bisphosphatase 0.8425541764214907 77 AT3G55330 PsbP-like protein 1 0.8424242531064093 56 AT3G12780 phosphoglycerate kinase 1 0.8422600298302668 46 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8415330197185543 59 AT1G20340 Cupredoxin superfamily protein 0.8412197642126154 45 AT5G21920 YGGT family protein 0.8380400764566792 46 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). 0.8369498337831178 47 AT5G30510 ribosomal protein S1 0.8350787124580425 54 AT3G16250 NDH-dependent cyclic electron flow 1 0.83286764082153 49 AT5G08050 Protein of unknown function (DUF1118) 0.8328027400142903 51 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8316583406379091 61 AT4G15510 Photosystem II reaction center PsbP family protein 0.8291529294063694 52 AT4G09650 ATP synthase delta-subunit gene 0.8287056672534282 68 AT4G34190 stress enhanced protein 1 0.8287014544512586 63 AT4G39710 FK506-binding protein 16-2 0.8284100268059923 55 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6 family protein 0.8280456644494769 56 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8276329421159094 86 AT5G45680 FK506-binding protein 13 0.8268964898370368 65 AT1G32990 plastid ribosomal protein l11 0.8256292327264942 59 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8255085224755826 79 AT5G36700 2-phosphoglycolate phosphatase 1 0.8255085224755826 79 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.8249103592913786 62 AT1G77490 thylakoidal ascorbate peroxidase 0.8247417715466431 63 AT3G27850 ribosomal protein L12-C 0.8244646373383492 64 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0.823478320286966 65 AT3G02730 thioredoxin F-type 1 0.8225506763137714 66 AT1G50320 thioredoxin X 0.8215870683390811 67 AT4G03280 photosynthetic electron transfer C 0.8212447096775797 71 AT4G24770 31-kDa RNA binding protein 0.821005147207555 70 AT2G35370 glycine decarboxylase complex H 0.8194777086114784 71 AT3G51820 UbiA prenyltransferase family protein 0.8192970646230496 72 AT1G64150 Uncharacterized protein family (UPF0016) 0.8192400496024961 73 AT3G46780 plastid transcriptionally active 16 0.8189396263342494 93 AT5G63310 nucleoside diphosphate kinase 2 0.8184805488205306 75 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8174952221727515 76 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8173291929611178 77 AT1G19150 photosystem I light harvesting complex gene 6 0.8169111361234435 87 AT5G35630 glutamine synthetase 2 0.8169105548468805 79 AT1G15980 NDH-dependent cyclic electron flow 1 0.8162556953763286 93 AT1G50900 Ankyrin repeat family protein 0.8161118163126151 81 AT1G35680 Ribosomal protein L21 0.814581474374987 82 AT5G14320 Ribosomal protein S13/S18 family 0.8144442827869033 83 AT1G03680 thioredoxin M-type 1 0.8123565023405702 86 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.811204831201121 87 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein 0.8105158216800387 88 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.8105109300857349 89 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0.8098436589715201 91 AT1G70760 inorganic carbon transport protein-related 0.8087136390015225 92 AT1G03475 Coproporphyrinogen III oxidase 0.8075575270650086 93 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8074907144560113 94 AT1G54500 Rubredoxin-like superfamily protein 0.8067966089430114 95 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8064248309565827 96 AT1G29070 Ribosomal protein L34 0.8057181934139679 97 AT2G46820 photosystem I P subunit 0.8054478346656462 99 AT4G18370 DEGP protease 5 0.8051325910759175 99 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8021313017483492 100