Sequence Description Alias PCC hrr Cre12.g514450 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component 0.927022233793 4 Cre06.g268450 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1c/MSI component 0.911626930358 10 Cre06.g307450 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A1 component 0.907790747484 10 Cre09.g403182 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone 0.90352533794 24 Cre04.g217750 0.90258502169 6 Cre07.g351000 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein 0.901031831813 6 Cre10.g453900 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.893849617384 7 Cre05.g232950 0.891003559154 31 Cre07.g316600 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase 0.890874428641 9 Cre03.g160450 Cell cycle.cytokinesis.phragmoplast disassembly.Katanin ATP-dependent microtubule severing complex.regulatory component 0.890794296243 10 Cre02.g092500 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein 0.886883228386 11 Cre14.g621000 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component 0.884202509858 24 Cre04.g222300 0.882861484087 38 Cre12.g506050 RNA processing.RNA 3-end polyadenylation.Cleavage Stimulatory Factor (CstF) complex.CstF77/Rna14 component 0.88253219701 31 Cre02.g106550 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SPF30 pre-mRNA splicing factor 0.881624390859 15 Cre04.g221650 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit A 0.879605436695 31 Cre12.g508250 0.879325079194 17 Cre06.g300750 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC7 component 0.87825036131 33 Cre17.g744147 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase 0.877654979816 19 Cre16.g688750 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana 0.877628307087 23 Cre17.g743847 0.87726931296 21 Cre12.g507700 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component 0.875546229141 22 Cre08.g376700 RNA processing.RNA 5-end cap adding.mRNA capping enzyme 0.874985366446 23 Cre12.g513500 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.873711033401 24 Cre03.g176400 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 112.2) & Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana 0.872999855076 25 Cre10.g441000 Protein IWS1 homolog 1 OS=Arabidopsis thaliana 0.872985863432 26 Cre03.g152450 0.871835318262 46 Cre17.g734150 TIP41-like protein OS=Arabidopsis thaliana 0.871764949721 29 Cre08.g372800 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B3 component 0.870188353341 31 Cre12.g520250 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component 0.868814773007 38 Cre09.g398650 Cactin OS=Arabidopsis thaliana 0.867624385999 33 Cre11.g467712 0.865321945896 53 Cre16.g662852 0.865036599932 37 Cre16.g679900 5-3 exoribonuclease 3 OS=Arabidopsis thaliana 0.864507846341 38 Cre09.g386731 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor 0.864492542646 48 Cre01.g020400 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana 0.864465320984 40 Cre08.g372750 0.864134872931 64 Cre01.g058886 Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.862901801629 44 Cre08.g382590 Actin-related protein 6 OS=Oryza sativa subsp. indica 0.862181933085 46 Cre06.g273250 Glycerol-3-phosphate acyltransferase 9 OS=Arabidopsis thaliana 0.860382014103 47 Cre03.g194800 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Clp1 component 0.859115094076 50 Cre14.g632783 Cell cycle.regulation.cyclins.CYCH-type cyclin 0.85889234027 51 Cre03.g144907 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC4 recruitment factor 0.858798229105 52 Cre12.g560400 0.858623847372 53 Cre17.g737250 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).SNU114/U5-116kDa snRNP component 0.857916598475 54 Cre09.g409801 0.855595344481 56 Cre14.g633650 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF6/PRP1/STA1 protein component 0.854932782185 75 Cre06.g270600 0.854490335648 94 Cre06.g307600 NAP1-related protein 2 OS=Oryza sativa subsp. indica 0.854294197007 59 Cre12.g486550 0.85345515264 60 Cre12.g527500 WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.852891421235 61 Cre09.g393551 0.852110095891 78 Cre03.g192400 0.851993840158 66 Cre10.g448700 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF60 component 0.851669192562 65 Cre06.g255400 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).snRNP40/U5-40kDa snRNP component 0.850365584772 66 Cre01.g003487 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud13 component 0.850062170674 67 Cre03.g185500 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 749.0) & Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP1 OS=Arabidopsis thaliana 0.849288078725 68 Cre02.g083050 0.849096607411 89 Cre06.g311750 0.847129960298 72 Cre16.g647602 ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.845890471793 74 Cre08.g371600 0.845640500249 76 Cre10.g455250 0.844858245019 79 Cre04.g215750 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.BUB3 checkpoint protein 0.844621273513 80 Cre15.g638050 0.844601450726 98 Cre02.g098100 0.844410627054 82 Cre01.g028550 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ deconjugation.OTU5 deubiquitinating protease 0.844102325296 83 Cre13.g578600 0.843157214722 85 Cre16.g694204 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP4/LEO1 component 0.841404654105 87 Cre03.g182600 Chromatin organisation.histone modifications.histone deacetylation.histone deacetylase machineries.HDC1/Rxt3 associated component 0.84046378268 88 Cre01.g025808 0.840456914389 90 Cre16.g665550 0.840149567742 91 Cre10.g432000 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component 0.839604623045 92 Cre11.g477300 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component 0.839331452404 95 Cre06.g289950 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component 0.838655835707 98 Cre16.g656250 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1-70K snRNP component 0.838487955939 100