Sequence Description Alias PCC hrr Cre06.g309300 Ribosomal RNA small subunit methyltransferase, chloroplastic OS=Arabidopsis thaliana 0.927260438359 1 Cre08.g377850 0.918369929354 2 Cre09.g389400 0.909484412684 7 Cre06.g266800 0.90151507011 4 Cre04.g224002 RNA processing.RNA modification.rRNA/tRNA methylation.TRM9-TRM112 tRNA uridine-methyltransferase complex.TRM9 component 0.898415467005 18 Cre05.g242900 0.896689927247 15 Cre10.g436600 Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Arabidopsis thaliana 0.894495903852 7 Cre03.g203351 0.890483604807 26 Cre12.g536850 0.88833716246 40 Cre15.g637249 0.888218289404 26 Cre01.g024251 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana 0.88783631607 22 Cre03.g204750 0.885360847762 37 Cre02.g095138 0.884567139668 13 Cre08.g385300 0.881853083772 14 Cre16.g657700 0.881334183469 28 Cre06.g273150 0.880272204073 16 Cre13.g568150 0.880087691514 82 Cre14.g613200 0.87983385985 42 Cre01.g070567 RNA biosynthesis.RNA polymerase I-dependent transcription.TFIf basal transcription factor complex.large subunit 0.877442760451 26 Cre03.g165200 0.876713895296 20 Cre13.g591501 RNA processing.RNA modification.pseudouridylation.TruA-type tRNA pseudouridine synthase 0.876322107017 21 Cre17.g744947 0.876250527995 25 Cre12.g548350 0.873896408103 23 Cre07.g314400 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana 0.873550021271 24 Cre02.g095079 0.873390134389 25 Cre04.g213500 0.873347488043 32 Cre07.g319750 DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana 0.872208528845 73 Cre02.g110200 0.872117094355 28 Cre10.g432400 0.871989775655 35 Cre06.g278233 0.871888086001 36 Cre09.g395880 0.871067528462 47 Cre03.g191650 0.871000735417 32 Cre16.g679876 0.870867342853 94 Cre02.g096900 tRNA-splicing endonuclease subunit Sen2-1 OS=Arabidopsis thaliana 0.868870982413 52 Cre17.g719522 Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana 0.868708263767 35 Cre17.g744997 0.868293268868 98 Cre07.g327850 0.867421876646 39 Cre14.g613450 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.tRNA adenine-N6-methyltransferase 0.864445534182 83 Cre10.g442850 Cell cycle.organelle machineries.DNA replication.type-Ia DNA topoisomerase 0.863712301891 58 Cre08.g368750 0.863033874968 41 Cre12.g540450 0.862961769563 42 Cre03.g200431 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PINTOX transcription factor 0.861766696622 43 Cre04.g214433 0.861223190179 44 Cre12.g485900 0.86110635573 45 Cre04.g217991 0.860011522097 47 Cre12.g543100 RNA processing.RNA modification.rRNA/tRNA methylation.TRM61-TRM6 tRNA adenosine-methyltransferase complex.TRM6 component 0.85925446955 64 Cre03.g144404 0.858152460324 60 Cre11.g467740 0.856733086754 53 Cre07.g350950 0.856678221428 54 Cre01.g044450 0.856453235943 55 Cre16.g669350 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase 0.856019731817 56 Cre02.g074300 0.855460755399 84 Cre13.g573300 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase 0.854802512696 60 Cre07.g330800 0.853880269701 64 Cre16.g694704 0.853612394261 62 Cre02.g144001 0.852684713767 93 Cre09.g393050 0.851694902415 89 Cre09.g387541 0.850974418493 87 Cre05.g238900 RNA biosynthesis.rRNA biogenesis.RH57 RNA helicase 0.850690122775 98 Cre09.g390801 0.849844073468 70 Cre03.g168350 Polynucleotide 5-hydroxyl-kinase NOL9 OS=Arabidopsis thaliana 0.847901308907 72 Cre03.g195550 0.84714047313 73 Cre13.g589167 0.845905251909 93 Cre01.g024100 0.845854196105 77 Cre15.g637350 RNA processing.RNA modification.rRNA/tRNA methylation.TRM3 tRNA guanosine-methyltransferase 0.843261805011 84 Cre09.g393800 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.PRDA1 FSD2-interacting factor 0.842849053009 82 Cre11.g474850 RNA pseudouridine synthase 6, chloroplastic OS=Arabidopsis thaliana 0.841987693789 83 Cre10.g442250 0.84131239106 93 Cre03.g155850 0.839326175422 90 Cre08.g377050 0.838696425207 92 Cre02.g088050 RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP30/POP2 component 0.838218549401 95 Cre07.g334250 0.837768175442 97 Cre09.g394584 0.837505161526 98