Sequence Description Alias PCC hrr AT3G12780 phosphoglycerate kinase 1 0.9273973439183395 3 AT1G09340 chloroplast RNA binding 0.9264344422277601 5 AT5G35630 glutamine synthetase 2 0.9231224903002913 3 AT3G54050 high cyclic electron flow 1 0.92150281604956 6 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit 0.9163966663966217 9 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 0.9138236875750626 11 AT4G03280 photosynthetic electron transfer C 0.9135743285103102 7 AT4G37930 serine transhydroxymethyltransferase 1 0.9129586314719946 8 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.908380334848594 9 AT1G45474 photosystem I light harvesting complex gene 5 0.9071328170942645 10 AT5G07020 proline-rich family protein 0.8998667410988408 11 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0.8982306916988637 12 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8974779554260259 13 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 0.8949517698834141 14 AT1G06680 photosystem II subunit P-1 0.8937723503806623 15 AT3G46780 plastid transcriptionally active 16 0.889539162088413 16 AT5G43750 NAD(P)H dehydrogenase 18 0.8861697264442575 29 AT1G15980 NDH-dependent cyclic electron flow 1 0.8780606748436799 28 AT1G20340 Cupredoxin superfamily protein 0.8771731126160732 19 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.876662081460797 25 AT5G36700 2-phosphoglycolate phosphatase 1 0.876662081460797 25 AT3G55800 sedoheptulose-bisphosphatase 0.875429444951911 34 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8753153267894349 27 AT5G66570 PS II oxygen-evolving complex 1 0.8728948957960476 24 AT3G01500 carbonic anhydrase 1 0.8719215327674504 25 AT4G22890 PGR5-LIKE A 0.8680654782693419 26 AT1G32080 membrane protein, putative 0.8675950298832453 27 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.8670540078973737 38 AT2G39470 PsbP-like protein 2 0.8662579757966391 49 AT2G46820 photosystem I P subunit 0.8662509852614902 30 AT1G44575 Chlorophyll A-B binding family protein 0.8653214585968663 31 AT1G54780 thylakoid lumen 18.3 kDa protein 0.8638904430779826 32 AT3G14420 Aldolase-type TIM barrel family protein 0.8638723901601014 33 AT3G02730 thioredoxin F-type 1 0.8631788685785651 34 AT3G14415 Aldolase-type TIM barrel family protein 0.8608649388794323 35 AT2G39730 rubisco activase 0.8589815320298949 36 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8567104195651412 37 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.8562318746140326 38 AT1G32060 phosphoribulokinase 0.8554266757809023 39 AT5G16710 dehydroascorbate reductase 1 0.8539175167698555 40 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein 0.853856038089584 41 AT5G38410 Ribulose bisphosphate carboxylase (small chain) family protein 0.8520839448590761 42 AT1G11860 Glycine cleavage T-protein family 0.8513295200622416 51 AT5G03880 Thioredoxin family protein 0.8507982036131247 44 AT4G38970 fructose-bisphosphate aldolase 2 0.8485056999197594 45 AT5G06290 2-cysteine peroxiredoxin B 0.8450269479739883 46 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8430532452485755 47 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8425652674996364 48 AT4G21280 photosystem II subunit QA 0.842323195737587 52 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8387041212008902 88 AT1G50320 thioredoxin X 0.8386644869103903 51 AT2G01110 Sec-independent periplasmic protein translocase 0.8380385778278875 52 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 0.8354727348263044 53 AT4G04640 ATPase, F1 complex, gamma subunit protein 0.8351043548901386 74 AT1G77490 thylakoidal ascorbate peroxidase 0.8315364904876037 55 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8309662700246838 56 AT1G67090 ribulose bisphosphate carboxylase small chain 1A 0.8296065855782403 57 AT3G62030 rotamase CYP 4 0.829347648436381 68 AT2G20890 photosystem II reaction center PSB29 protein 0.8288440132354626 91 AT4G39710 FK506-binding protein 16-2 0.8282921163402213 60 AT1G03680 thioredoxin M-type 1 0.8274008270709773 61 AT3G11945 homogentisate prenyltransferase 0.826892367591331 62 AT5G38420 Ribulose bisphosphate carboxylase (small chain) family protein 0.8264116337324436 63 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.8247214958064372 64 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). 0.8246720187871718 65 AT3G11630 Thioredoxin superfamily protein 0.8236249614314569 66 AT5G59250 Major facilitator superfamily protein 0.8224328554375074 67 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.8220718277207381 68 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit 0.8216384524790652 69 AT3G15360 thioredoxin M-type 4 0.8215121036386218 70 AT2G21330 fructose-bisphosphate aldolase 1 0.8212950119728024 71 AT1G73060 Low PSII Accumulation 3 0.8202319841669249 72 AT1G70760 inorganic carbon transport protein-related 0.8190642315592865 73 AT4G09010 ascorbate peroxidase 4 0.8189765237593755 92 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.817798128698825 75 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.815870818612185 78 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). 0.8158416121997747 79 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.8144289072664828 81 AT3G16140 photosystem I subunit H-1 0.8143418183072226 82 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region 0.8126711034423595 91 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) 0.8125998726173027 84 AT3G50820 photosystem II subunit O-2 0.8116046030264786 86 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0.8114107031958496 87 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8108712473457377 90 AT3G51820 UbiA prenyltransferase family protein 0.809323703046543 91 AT4G12800 photosystem I subunit l 0.809007357518059 92 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) 0.808531138160185 93 AT1G22850 SNARE associated Golgi protein family 0.8081744707122753 94 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8065662589807168 95 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8065412334428028 96 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.8045860364157653 97 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8044089675314533 98