Sequence Description Alias PCC hrr Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 0.926240750092 1 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 0.916712048009 14 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 0.909877782323 9 Cre12.g534250 0.90658225996 4 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 0.905968401036 15 Cre03.g174750 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.897919607047 6 Cre16.g681900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component 0.891891290519 8 Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 0.891885033822 24 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 0.889968148147 23 Cre09.g396300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase 0.889297854301 10 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 0.887436293802 22 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.887391761952 20 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 0.886943277939 25 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 0.884052523595 31 Cre03.g187450 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 0.883259692846 15 Cre12.g510400 0.88276359912 16 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.882637341052 17 Cre06.g303700 0.879851153235 26 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 0.877531035932 21 Cre12.g514200 Protein HOTHEAD OS=Arabidopsis thaliana 0.871637662357 20 Cre11.g467770 Cellular respiration.glycolysis.cytosolic glycolysis.phosphoglycerate kinase 0.87138077971 21 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 0.869770911966 22 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component 0.86812887191 23 Cre17.g696350 0.867563506853 24 Cre07.g335300 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase II 0.866889846787 25 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 0.862811881313 30 Cre12.g509050 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.PPL1 protein 0.862030358348 27 Cre07.g325736 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana 0.861330854503 28 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 0.860412750213 29 Cre07.g313700 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 0.857740801572 32 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 0.852482087343 31 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.851853942675 32 Cre12.g483650 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase 0.850791399555 33 Cre03.g146167 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein 0.850312496747 34 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 0.849654847102 44 Cre08.g362900 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein 0.846843847417 36 Cre13.g566000 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase 0.844672005472 37 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase 0.841552012985 38 Cre03.g182150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb32 protein 0.84002547727 39 Cre13.g576760 0.838306200536 40 Cre12.g560900 0.8381472604 41 Cre02.g145050 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 0.832875819782 42 Cre06.g269050 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic62 component 0.832844235335 43 Cre03.g209841 0.830489397806 44 Cre03.g172000 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP reductase 0.830428879217 45 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR 0.829580086352 46 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 0.829317379365 47 Cre02.g093450 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase(50.4.1 : 437.0) & Fructose-bisphosphate aldolase 4, cytosolic OS=Arabidopsis thaliana 0.826383419355 48 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 0.825899164976 57 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase 0.824073134049 62 Cre11.g476750 Ferredoxin--NADP reductase, chloroplastic OS=Chlamydomonas reinhardtii 0.824024324481 51 Cre07.g325500 Phytohormones.abscisic acid.perception and signalling.membrane-localized receptors.ABAR chloroplast envelope-localized receptor 0.823708976135 52 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 0.822749980438 53 Cre10.g429150 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.anthranilate phosphoribosyltransferase 0.822514905643 54 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter 0.820295987821 55 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 0.819717067815 56 Cre04.g216950 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase III 0.818542688141 57 Cre08.g369000 0.816973046228 58 Cre10.g431850 Uncharacterized protein At3g52155, chloroplastic OS=Arabidopsis thaliana 0.816881070174 59 Cre03.g194200 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E1 pyruvate dehydrogenase component.beta subunit 0.81572535524 60 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase 0.81510431929 61 Cre07.g328075 0.813278141261 62 Cre09.g393173 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.810232406005 63 Cre03.g145747 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.chorismate synthase 0.81020675831 64 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.808246593235 65 Cre17.g732250 0.80801470641 66 Cre04.g213100 0.807661312487 67 Cre01.g017350 0.806988514712 68 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor 0.804497103413 69 Cre16.g651923 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CrtISO carotenoid isomerase 0.803864814181 70 Cre16.g650050 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 0.803724256956 71 Cre03.g155200 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.chorismate mutase 0.803547090398 72 Cre12.g492350 0.802001078518 73 Cre06.g278105 0.801975053958 74 Cre10.g435850 0.801240840522 75 Cre09.g389430 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase complex.alpha subunit 0.800928708786 76 Cre02.g143000 Lipid metabolism.glycerolipid synthesis.phosphatidic acid.glycerol-3-phosphate acyltransferase 0.800802582151 77 Cre01.g012150 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 0.80067093172 78 Cre14.g609300 0.80064700404 79 Cre12.g557050 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.800215813176 80 Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component 0.799861897759 81 Cre12.g531900 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein 0.799652103683 82 Cre03.g194450 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 0.799242283982 83 Cre08.g366050 0.797898885911 84 Cre03.g145207 0.797826804199 85 Cre12.g510650 Carbohydrate metabolism.gluconeogenesis.cytosolic fructose-1,6-bisphosphatase 0.797470665174 86 Cre03.g188700 Probable plastid-lipid-associated protein 7, chloroplastic OS=Arabidopsis thaliana 0.797222016842 87 Cre12.g508850 0.796498954584 88 Cre12.g558900 Cytochrome b6-f complex subunit petO, chloroplastic OS=Chlamydomonas reinhardtii 0.796459825499 89 Cre12.g546050 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXR 1-deoxy-D-xylulose 5-phosphate reductase 0.795733544565 90 Cre05.g238322 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase 0.795697754178 91 Cre04.g231026 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component 0.795524668742 92 Cre08.g377150 0.795212503132 93 Cre02.g081250 0.794966140961 94 Cre06.g255500 0.794783151238 95 Cre03.g181250 Protein TIC 62, chloroplastic OS=Arabidopsis thaliana 0.794635257514 96 Cre06.g268600 External stimuli response.temperature.Csd (cold-shock-domain) protein 0.794390605903 97 Cre07.g342150 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase 0.793781264806 98 Cre05.g245102 0.793164304403 99 Cre12.g554103 0.791414826934 100