Sequence Description Alias PCC hrr Cre03.g144184 0.940365492145 1 Cre17.g731050 ABC transporter I family member 20 OS=Arabidopsis thaliana 0.909589496174 3 Cre17.g740950 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.905125141475 3 Cre08.g384650 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.873576316593 4 Cre13.g565650 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase 0.845117875724 5 Cre07.g320450 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.838793812812 6 Cre05.g242400 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGR5-like component 0.81763750808 7 Cre01.g016750 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).PsbS-dependent machinery.PsbS protein 0.807657007752 8 Cre03.g145567 0.793618910269 9 Cre13.g571560 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DET1 regulator component 0.791676731724 10 Cre06.g310500 External stimuli response.light.UV-B light.UV-B signal transduction transcriptional regulator 0.782286662074 11 Cre14.g624350 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT) 0.780285919583 13 Cre12.g485800 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 0.776398852791 13 Cre17.g720050 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 0.776350700528 14 Cre10.g444550 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease 0.771121257493 15 Cre09.g411200 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb33 protein 0.768851090453 16 Cre07.g320400 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.754454982198 17 Cre16.g679250 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.752756891078 18 Cre08.g365900 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LhcSR-dependent machinery.LhcSR protein 0.746233317962 19 Cre07.g315150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.RBD1 protein 0.744623938225 20 Cre13.g562850 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein 0.742262339161 21 Cre02.g078939 Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri 0.74109993724 22 Cre08.g358540 0.738147097043 23 Cre04.g215050 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.carotenoid beta ring hydroxylase 0.735197985573 24 Cre06.g251150 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP2 protein 0.731494405448 25 Cre03.g145587 Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana 0.717284829987 26 Cre02.g142146 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 0.712151405726 30 Cre09.g395650 0.704320987617 28 Cre01.g028600 Tropinone reductase homolog At2g29290 OS=Arabidopsis thaliana 0.696374877117 29 Cre14.g610850 0.6938170709 39 Cre13.g587500 Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica 0.693160122098 31 Cre09.g394325 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.689962622412 32 Cre02.g110300 0.674602666885 33 Cre08.g379550 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter 0.674297959495 34 Cre05.g246552 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.668098929331 68 Cre12.g558550 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.657728756581 52 Cre06.g266900 Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana 0.656723469405 47 Cre06.g281250 0.645731549019 38 Cre16.g690350 0.639383839969 57 Cre01.g053850 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 0.637886416868 66 Cre03.g178014 0.635230958945 42 Cre09.g398252 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.633889810771 95 Cre01.g016150 0.633412530331 55 Cre03.g197750 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase 0.627347318961 46 Cre16.g673001 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase 0.62424329479 62 Cre16.g686400 0.620697097769 48 Cre02.g109950 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP1 protein 0.62032908714 50 Cre08.g358538 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase 0.618785136444 93 Cre03.g181400 Coenzyme metabolism.tetrahydrofolate synthesis.p-aminobenzoate synthesis.aminodeoxychorismate synthase 0.604964651567 99 Cre04.g221550 0.597630330989 64 Cre08.g360850 0.595225156159 78 Cre17.g733174 0.584275747583 60 Cre08.g360801 0.582745933703 69 Cre13.g571580 0.552854237764 68 Cre06.g263550 0.540355319008 73 Cre08.g380000 0.535471017458 75 Cre09.g400404 0.488844194994 94 Cre14.g615000 Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana 0.487297067192 96