Sequence Description Alias PCC hrr Cre08.g358540 0.854188875695 2 Cre09.g411200 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb33 protein 0.849051501461 3 Cre02.g109950 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP1 protein 0.844893018618 3 Cre13.g562850 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein 0.831717384409 5 Cre09.g395650 0.828889151801 5 Cre06.g273700 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein 0.807937159562 6 Cre07.g315150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.RBD1 protein 0.802792495067 7 Cre17.g731050 ABC transporter I family member 20 OS=Arabidopsis thaliana 0.790680106373 12 Cre14.g624350 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT) 0.783846781062 10 Cre08.g365900 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LhcSR-dependent machinery.LhcSR protein 0.774823518658 10 Cre02.g079600 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase 0.765489367648 24 Cre16.g686400 0.761819826524 12 Cre17.g720050 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 0.76111003788 14 Cre16.g673001 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase 0.756583025348 14 Cre09.g398252 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.755460071347 15 Cre12.g485800 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 0.75437271805 16 Cre06.g283750 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.HST homogentisate solanesyltransferase 0.752504137267 44 Cre06.g290350 0.749069081642 18 Cre10.g440450 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb28 protein 0.746674095082 19 Cre06.g251150 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP2 protein 0.746327743752 20 Cre01.g028600 Tropinone reductase homolog At2g29290 OS=Arabidopsis thaliana 0.738401660104 21 Cre03.g145587 Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana 0.737142835171 22 Cre03.g144184 0.733124460454 23 Cre02.g078939 Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri 0.731141384425 24 Cre03.g195200 0.731043750594 25 Cre12.g509650 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase 0.729827451321 68 Cre16.g662150 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB1 component 0.725952999221 86 Cre03.g197750 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase 0.714479605369 28 Cre13.g578650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF173 protein 0.713221315949 67 Cre13.g580300 ABC transporter I family member 19 OS=Arabidopsis thaliana 0.712151405726 30 Cre12.g519300 0.709356131295 31 Cre05.g242400 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGR5-like component 0.705421513075 32 Cre08.g384650 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.701948781594 33 Cre13.g565650 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase 0.700408317855 37 Cre12.g558550 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.695426137675 35 Cre06.g266900 Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana 0.679916084813 36 Cre17.g740950 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.676716859665 37 Cre10.g448051 0.669683741344 40 Cre02.g088500 0.666294322672 55 Cre16.g679250 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.650948312825 99 Cre01.g038600 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.omega-3/omega-6 fatty acid desaturase 0.647916178731 87 Cre13.g587500 Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica 0.646278157337 46 Cre17.g721700 Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana 0.646000419126 47 Cre04.g215050 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.carotenoid beta ring hydroxylase 0.634498980258 49 Cre02.g110300 0.63152761021 50 Cre03.g178014 0.622452654747 54 Cre10.g461900 Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana 0.621597323984 55 Cre01.g031100 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.MET1 protein 0.615864694324 57 Cre08.g358538 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase 0.615521464248 99 Cre04.g225050 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component 0.607262130671 70 Cre13.g571560 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DET1 regulator component 0.605633848585 63 Cre01.g016150 0.601413747054 87 Cre09.g397250 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.delta-7/delta-9 fatty acid desaturase 0.592510293755 69 Cre03.g145567 0.569071594361 88 Cre09.g415700 Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3 OS=Nicotiana langsdorffii x Nicotiana sanderae 0.567458284079 89 Cre10.g466850 Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana 0.556850270787 95 Cre14.g615000 Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana 0.550770007782 100