Sequence Description Alias PCC hrr Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component 0.929966431125 2 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 0.917340636854 11 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 0.910049018819 20 Cre07.g313700 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 0.906970225629 9 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 0.906391796888 17 Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 0.904233342209 16 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 0.901883455001 15 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 0.896595005624 21 Cre06.g303700 0.892534931672 18 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 0.889895742951 31 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 0.888514003133 11 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.888013154079 19 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 0.884496422324 13 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase 0.881845086233 21 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.879897443321 15 Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein 0.877634447122 20 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 0.873711666127 27 Cre07.g328075 0.870916168812 18 Cre16.g681900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component 0.869317542153 21 Cre06.g300700 0.866164210429 24 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 0.86488044601 28 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 0.861671664026 22 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor 0.860043550919 23 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase 0.858973346952 35 Cre17.g702200 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 0.858713644316 26 Cre13.g576760 0.858060136285 29 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter 0.857396894536 27 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) 0.854564625385 28 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 0.851347457937 35 Cre04.g231026 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component 0.850653282362 30 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR 0.849704955741 31 Cre03.g145207 0.847573584528 32 Cre07.g335300 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase II 0.847313340657 33 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 0.845165066004 37 Cre12.g492350 0.843438097675 35 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase 0.843308684789 36 Cre08.g377150 0.842909169112 37 Cre10.g457650 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component 0.842527363639 38 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 0.841814957293 56 Cre02.g093450 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase(50.4.1 : 437.0) & Fructose-bisphosphate aldolase 4, cytosolic OS=Arabidopsis thaliana 0.841412947675 40 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 0.840742724836 49 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.839684354861 42 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase 0.835972562864 43 Cre07.g334800 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.83373024788 44 Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 0.830477321827 48 Cre01.g042800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 0.829317379365 47 Cre09.g396300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase 0.820362381532 52 Cre09.g416200 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor 0.81981870993 48 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.815550217404 49 Cre12.g551950 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.814867684115 50 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 0.811859750891 51 Cre03.g183400 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA3 protein 0.811269878916 52 Cre03.g209841 0.806809552949 53 Cre08.g369000 0.804850412702 54 Cre01.g037200 0.80411149162 55 Cre08.g375550 0.803642987641 56 Cre12.g524500 0.799352063238 57 Cre01.g037850 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.acetyl-CoA carboxylase regulator (BADC) 0.796954199122 58 Cre16.g674300 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 0.795698064683 59 Cre10.g422300 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) 0.795291916869 60 Cre13.g566000 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase 0.794969698572 61 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component 0.794715716632 66 Cre01.g045902 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component 0.790770096644 66 Cre03.g174750 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.790562997026 91 Cre03.g171100 0.789003788061 65 Cre10.g439350 0.788399992628 66 Cre06.g280650 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.Y3IP1 protein 0.787458037575 67 Cre09.g389393 0.785486708105 68 Cre03.g146167 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein 0.783314070958 75 Cre03.g155200 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.chorismate mutase 0.782864459872 70 Cre03.g195650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS10 component 0.777884149557 72 Cre04.g213100 0.776786123239 74 Cre09.g398289 1-acyl-sn-glycerol-3-phosphate acyltransferase CHLREDRAFT_174358 OS=Chlamydomonas reinhardtii 0.776211981307 75 Cre16.g650050 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 0.77570189312 76 Cre03.g187450 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 0.775339038259 77 Cre08.g362900 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein 0.774187099781 78 Cre03.g194450 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 0.770873698851 79 Cre06.g284650 0.768771572261 80 Cre08.g371650 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Hcf106 component 0.768595040467 81 Cre10.g435850 0.76814621064 82 Cre12.g517900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component 0.765319831931 83 Cre01.g014000 0.76518949107 84 Cre09.g393173 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.763812270606 91 Cre10.g454250 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 0.762702601136 87 Cre10.g438650 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase 0.762010335483 88 Cre03.g194200 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E1 pyruvate dehydrogenase component.beta subunit 0.760824549005 89 Cre16.g651923 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CrtISO carotenoid isomerase 0.759121595576 94 Cre03.g206550 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 0.756731440004 91 Cre12.g494750 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS20 component 0.756634728821 92 Cre01.g017300 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS21 | mtRPS21 component 0.755894565944 93 Cre12.g508850 0.753469217068 95 Cre17.g696350 0.753114956225 96 Cre16.g673729 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp10 Hsp60-co-chaperone 0.752589004008 97 Cre13.g581650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL12 component 0.749032750131 99 Cre06.g272850 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL10 | mtRPL10 component 0.748922327567 100