Sequence Description Alias PCC hrr Cre17.g712200 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.937297544625 2 Cre03.g174500 Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 0.929685464914 9 Cre08.g380151 0.929281899851 3 Cre11.g468356 0.925999075994 7 Cre12.g492200 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor 0.92542647045 9 Cre13.g568700 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component 0.92465801319 14 Cre16.g694208 0.923859718624 7 Cre02.g142700 0.923384684767 13 Cre15.g636650 0.923207611536 9 Cre17.g711457 0.916752492816 29 Cre12.g526950 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF5 component 0.9166363628 20 Cre12.g493550 0.916108241941 12 Cre02.g078150 0.912747080549 13 Cre03.g190550 0.912702434882 20 Cre01.g038151 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.912024647416 15 Cre17.g715850 0.908482533164 34 Cre08.g382900 0.907502196833 17 Cre01.g010650 0.904916250813 18 Cre12.g506650 0.904578648408 43 Cre13.g576250 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC1/Tau95 component 0.904063404374 20 Cre10.g425501 Transcription initiation factor TFIID subunit 1 OS=Oryza sativa subsp. japonica 0.90310322958 50 Cre07.g319000 0.902974764867 73 Cre16.g675950 0.902800911295 30 Cre17.g745547 0.902195775986 36 Cre01.g055966 0.901618521778 25 Cre02.g143600 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component 0.901296781917 26 Cre16.g648250 0.900555142844 30 Cre13.g587800 0.898825277469 28 Cre06.g251951 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Pfs2/FY component 0.897339580317 31 Cre12.g487600 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component 0.897202612551 41 Cre14.g633100 0.896544764279 32 Cre07.g313500 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.NUP214 nucleoporin 0.895990972237 36 Cre08.g376740 0.894412796748 34 Cre03.g152450 0.894088855423 35 Cre08.g364050 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component 0.892893430225 36 Cre11.g478650 0.892617226335 37 Cre04.g221650 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit A 0.891741310688 38 Cre08.g378500 0.891554047563 39 Cre02.g084900 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.RPAP3 polymerase- II regulator protein 0.891184251168 40 Cre14.g633850 0.890588625943 41 Cre10.g464950 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC4/Tau131 component 0.890317423592 42 Cre06.g278197 Probable ubiquitin-like-specific protease 2B OS=Arabidopsis thaliana 0.889401612935 43 Cre07.g342450 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.88921516422 44 Cre01.g053200 Tyrosyl-DNA phosphodiesterase 1 OS=Arabidopsis thaliana 0.889014019373 45 Cre06.g287550 0.888506934174 46 Cre01.g012450 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.888486990467 47 Cre16.g670550 0.88762239803 48 Cre16.g661400 0.887463203909 74 Cre12.g524100 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component 0.885779544542 50 Cre14.g610050 0.884980752155 66 Cre11.g467751 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase 0.884242106373 53 Cre03.g196651 DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana 0.881513170063 54 Cre13.g565517 0.880782532593 56 Cre02.g086887 Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana 0.88019516907 58 Cre05.g233600 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 199.1) & Cell division control protein 2 homolog OS=Oxybasis rubra 0.879048121552 59 Cre01.g039600 0.87902187395 60 Cre07.g317800 0.878067021621 79 Cre11.g481800 RNA biosynthesis.transcriptional activation.CPP1-like transcription factor 0.877194145233 63 Cre02.g083050 0.876242479617 64 Cre02.g096551 0.875932804452 65 Cre11.g482483 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component 0.875226219922 75 Cre16.g692400 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.MRG histone H3K4/H3K36 methylation reader 0.874598405116 67 Cre03.g162150 0.874041281241 68 Cre02.g095800 0.874027504493 69 Cre16.g679400 0.873971824119 70 Cre03.g202875 0.873952607882 71 Cre08.g372050 0.873285459914 74 Cre09.g400664 0.872823214563 76 Cre16.g695300 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component 0.87275630885 78 Cre09.g400000 0.871875309454 79 Cre01.g013750 0.870539869671 83 Cre03.g177007 0.869622469144 85 Cre13.g581801 0.869128754232 86 Cre03.g205428 0.867630279633 89 Cre11.g467706 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase 0.86721019737 91 Cre16.g686173 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.865028193459 96 Cre17.g733800 0.864769607646 97 Cre09.g398808 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GRIP-type golgin 0.863554987961 100