Sequence Description Alias PCC hrr Cre09.g393950 Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Arabidopsis thaliana 0.890575284139 1 Cre17.g729450 Chloride channel protein CLC-d OS=Arabidopsis thaliana 0.855877240599 2 Cre02.g081400 Amino acid metabolism.degradation.branched-chain amino acid.BCAT branched-chain aminotransferase 0.846267936042 3 Cre08.g369150 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.838068096126 4 Cre08.g372250 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.833002368077 5 Cre05.g246552 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.815283719228 7 Cre02.g095092 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PSY phytoene synthase 0.809935079269 7 Cre01.g053850 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 0.807487130454 8 Cre02.g084950 Nucleotide metabolism.purines.phosphotransfers.guanylate kinase 0.806226797072 9 Cre12.g547000 0.805331870023 10 Cre15.g643600 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-B component 0.804811989992 11 Cre16.g676550 0.803422893139 12 Cre13.g565650 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase 0.787963670233 15 Cre08.g358538 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase 0.774564080615 14 Cre14.g615950 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.771703844715 19 Cre14.g620350 Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic OS=Oryza sativa subsp. japonica 0.768037276617 16 Cre12.g552851 Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SPY O-fucosyltransferase 0.762171301567 30 Cre10.g456300 PsbD mRNA maturation factor Nac2, chloroplastic OS=Chlamydomonas reinhardtii 0.75845989097 34 Cre17.g734612 ABC transporter C family member 14 OS=Arabidopsis thaliana 0.757625174627 19 Cre09.g402500 Solute transport.primary active transport.V-type ATPase complex.membrane V0 subcomplex.subunit a 0.75373847219 20 Cre12.g514050 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase 0.749967080141 35 Cre09.g415600 0.749110522522 22 Cre10.g429800 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.747872466073 23 Cre06.g286350 0.745888129534 24 Cre01.g002250 Serotonin N-acetyltransferase 2, chloroplastic OS=Oryza sativa subsp. japonica 0.745600782564 25 Cre06.g281800 0.742426030984 26 Cre10.g430800 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.737957047084 41 Cre01.g032750 0.737909740475 28 Cre01.g027700 0.733124166294 58 Cre14.g624350 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT) 0.731551050484 31 Cre11.g476100 0.725550545725 76 Cre06.g260450 Solute transport.carrier-mediated transport.IT superfamily.DASS family.dicarboxylate:malate antiporter (DIT-type) 0.721673754446 34 Cre12.g558550 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.718405044357 35 Cre13.g564900 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter 0.717520617993 36 Cre01.g038600 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.omega-3/omega-6 fatty acid desaturase 0.717104034988 37 Cre16.g679250 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.716388102627 38 Cre43.g760497 Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana 0.714571259588 54 Cre13.g570350 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.714541622536 45 Cre06.g269801 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.712901018504 55 Cre09.g407200 Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.711538013741 42 Cre01.g050500 Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.711166522812 43 Cre12.g549700 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.pre-40S subunit nuclear export.Dim2 export factor 0.710745321523 45 Cre17.g727700 DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica 0.709210550083 73 Cre13.g581850 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.705167407223 49 Cre06.g278263 Embryogenesis-associated protein EMB8 OS=Picea glauca 0.698354791167 97 Cre12.g533550 Cellular respiration.glycolysis.cytosolic glycolysis.pyruvate kinase 0.695862162332 64 Cre10.g439000 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.695742631936 55 Cre12.g494550 0.688126808902 63 Cre03.g158500 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.686254599423 68 Cre05.g237000 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP1) 0.685828455406 87 Cre16.g663400 Solute transport.channels.VCCN chloride anion channel 0.685030969028 67 Cre09.g394510 0.684895679336 84 Cre16.g690350 0.683475741536 71 Cre01.g007050 0.682505971684 73 Cre11.g467781 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.675598310311 83 Cre08.g384600 0.674951118081 98 Cre06.g281250 0.670338258849 89 Cre14.g612800 0.66743257736 92 Cre02.g143550 0.665341826048 98 Cre09.g398252 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.665192404781 99