Sequence Description Alias PCC hrr Cre03.g171100 0.897572109701 1 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 0.891306416586 5 Cre06.g300700 0.891260525243 14 Cre17.g702200 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 0.884419538357 7 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 0.878473724215 29 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 0.877120459377 20 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase 0.876937269786 24 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase 0.874597872721 25 Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein 0.873679502702 22 Cre12.g551950 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.873279051145 12 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 0.869114322196 41 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.866919759301 36 Cre03.g209841 0.864346594769 13 Cre07.g334800 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.857157266781 14 Cre06.g303700 0.856414569293 49 Cre01.g052100 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL18 component 0.852428271481 27 Cre01.g014000 0.851564868799 17 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 0.850993023967 53 Cre13.g576760 0.848375487839 33 Cre10.g438650 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase 0.848203749722 20 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase 0.846046540141 46 Cre16.g681900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component 0.844345898473 48 Cre03.g145207 0.843533589902 33 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 0.842527363639 38 Cre12.g494450 30S ribosomal protein S16, chloroplastic OS=Staurastrum punctulatum 0.84076127201 25 Cre02.g074100 0.839074432035 26 Cre13.g581650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL12 component 0.837188141505 36 Cre01.g017300 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS21 | mtRPS21 component 0.832062279727 33 Cre08.g362900 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein 0.832054404435 29 Cre03.g195650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS10 component 0.831736693986 40 Cre13.g602350 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase 0.829278075156 31 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 0.828683623728 52 Cre07.g328075 0.828036934701 33 Cre16.g674300 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 0.82356432034 34 Cre03.g183400 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA3 protein 0.821395616842 35 Cre04.g213100 0.819311412895 36 Cre03.g156050 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.818980798586 37 Cre10.g438550 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Tha4 component 0.818684954996 38 Cre13.g580350 0.817789485372 39 Cre12.g494750 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS20 component 0.813592883644 40 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 0.813237153003 65 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 0.81289329252 62 Cre01.g049000 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF2 assembly factor 0.811737030843 43 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 0.811585140078 70 Cre12.g493950 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS13 | mtRPS13 component 0.809930670114 45 Cre03.g146167 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein 0.808703800087 47 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor 0.807643616627 47 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 0.804904125871 81 Cre01.g037850 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.acetyl-CoA carboxylase regulator (BADC) 0.804231537206 49 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 0.803981065158 50 Cre06.g272850 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL10 | mtRPL10 component 0.803069839444 51 Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 0.803006273463 74 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 0.80156334489 65 Cre17.g726450 0.801056084293 54 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase 0.800349068693 56 Cre02.g145050 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 0.798122474418 56 Cre09.g393173 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.796392150494 58 Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component 0.795727546613 61 Cre16.g679300 0.787902235604 59 Cre07.g325734 Nucleotide metabolism.deoxynucleotide metabolism.nucleoside diphosphate kinase 0.787557705027 60 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 0.785104504642 86 Cre10.g423650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL11 component 0.783809204736 63 Cre06.g265800 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL28 component 0.783690171393 64 Cre03.g208050 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.hydroxyacyl-ACP dehydratase (ptHD) 0.783038083704 65 Cre09.g389393 0.781557873994 66 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter 0.781040530219 67 Cre07.g334600 0.780662538683 68 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 0.780660567852 95 Cre02.g108850 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL17 component 0.778960557753 71 Cre04.g217932 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL35 component 0.778586638607 72 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component 0.777652245029 82 Cre09.g402100 0.776727923537 74 Cre48.g761197 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL3 component 0.775502460875 75 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase 0.771003608412 76 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.770190038193 88 Cre17.g732250 0.768320495639 78 Cre07.g352850 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL32 component 0.767951245818 79 Cre16.g651923 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CrtISO carotenoid isomerase 0.767675564909 80 Cre07.g321300 0.767382871547 81 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) 0.766868640876 82 Cre10.g462950 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL33 component 0.76642313098 83 Cre03.g187450 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 0.766136270999 84 Cre11.g475850 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA2 protein 0.76545868208 85 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.761568728859 95 Cre06.g284600 0.760903559997 88 Cre02.g088900 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.758777198146 89 Cre12.g520600 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS6 component 0.757747829375 90 Cre03.g188700 Probable plastid-lipid-associated protein 7, chloroplastic OS=Arabidopsis thaliana 0.757037133188 91 Cre06.g264300 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS15 component 0.756700079892 92 Cre11.g479500 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL4 component 0.755605367414 93 Cre09.g415950 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL6 component 0.753081959412 94 Cre12.g527550 0.751585754801 95 Cre08.g377150 0.751241388081 97 Cre08.g365400 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL31 component 0.750579482748 98 Cre16.g673729 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp10 Hsp60-co-chaperone 0.75002391649 99 Cre02.g084000 0.749534078592 100