Zci_02959.3


Description : no annotation


Gene families : OG_01_0000749 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000749_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_02959.3
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Zci_02978.1 No alias no annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_10266.1 No alias no annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11236.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11443.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11473.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
BP GO:0007160 cell-matrix adhesion IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR041469 Subtilisin-like_FN3 247 349
IPR003137 PA_domain 4 62
IPR003886 NIDO_dom 792 873
IPR003886 NIDO_dom 527 607
IPR000209 Peptidase_S8/S53_dom 63 195
No external refs found!