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  5. Zci_03527.3

Zci_03527.3


Description : regulatory protein (DDX5) of pre-mRNA splicing


Gene families : OG_01_0002739 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_03527.3
Cluster HCCA: Cluster_149


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004427 inorganic diphosphatase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 344 423
IPR011545 DEAD/DEAH_box_helicase_dom 138 307
No external refs found!