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  5. Zci_04059.2

Zci_04059.2


Description : component of post-Golgi trafficking SCD complex (SCD1)


Gene families : OG_01_0004587 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_04059.2
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AT1G49040 No alias stomatal cytokinesis defective / SCD1 protein (SCD1) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001194 cDENN_dom 128 315
IPR001680 WD40_repeat 1139 1178
IPR001680 WD40_repeat 1012 1051
IPR001680 WD40_repeat 918 965
IPR001680 WD40_repeat 975 1007
IPR001680 WD40_repeat 1101 1134
IPR005113 uDENN_dom 41 108
No external refs found!