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  5. Zci_04422.1

Zci_04422.1


Description : protein involved in PS-II assembly (Psb32)


Gene families : OG_01_0005278 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_04422.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT1G54780 No alias thylakoid lumen 18.3 kDa protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g182150 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_19220V3.1 No alias thylakoid lumen 18.3 kDa protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_6980V3.1 No alias thylakoid lumen 18.3 kDa protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0097573 glutathione oxidoreductase activity IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007621 TPM_dom 112 254
No external refs found!