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  5. Zci_04606.1

Zci_04606.1


Description : component eL13 of LSU proteome component


Gene families : OG_01_0001081 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_04606.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT3G49010 No alias breast basic conserved 1 0.24 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G23900 No alias Ribosomal protein L13e family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g630100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g04920.1 No alias component RPL13 of LSU proteome component 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g19790.1 No alias component RPL13 of LSU proteome component 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_7370V3.1 No alias breast basic conserved 1 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_15900V3.1 No alias breast basic conserved 1 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_3490V3.1 No alias breast basic conserved 1 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_26280V3.1 No alias breast basic conserved 1 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_21130V3.1 No alias breast basic conserved 1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001380 Ribosomal_L13e 7 185
No external refs found!