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AT2G36980


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0017668 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G36980
Cluster HCCA: Cluster_252


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP HCCA
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
MF GO:0034046 poly(G) binding IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
MF GO:0070717 poly-purine tract binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 401 448
IPR002885 Pentatricopeptide_repeat 300 347
IPR002885 Pentatricopeptide_repeat 34 81
IPR002885 Pentatricopeptide_repeat 170 214
IPR002885 Pentatricopeptide_repeat 376 398
IPR002885 Pentatricopeptide_repeat 139 167
IPR002885 Pentatricopeptide_repeat 549 574
IPR002885 Pentatricopeptide_repeat 109 132
PLAZA 3.0 Dicots AT2G36980