1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_04861.1

Zci_04861.1


Description : no annotation


Gene families : OG_01_0003164 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_04861.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Cre12.g491150 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_13440V3.1 No alias Vacuolar protein sorting 55 (VPS55) family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004529 exodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008409 5'-3' exonuclease activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP HCCA
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0070122 isopeptidase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007262 Vps55/LEPROT 89 200
No external refs found!