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  5. AT2G37470

AT2G37470


Description : Histone superfamily protein


Gene families : OG_01_0000046 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37470
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264900 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274250 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276550 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276900 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504700 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g505600 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506200 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g570050 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g709150 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g710450 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g711750 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g713450 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714050 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714550 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g04070.1 No alias histone (H2B) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_7610V3.1 No alias Histone superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_15800V3.1 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000719 photoreactive repair IEP HCCA
CC GO:0000798 nuclear cohesin complex IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005880 nuclear microtubule IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007130 synaptonemal complex assembly IEP HCCA
BP GO:0007349 cellularization IEP HCCA
BP GO:0008219 cell death IEP HCCA
CC GO:0008278 cohesin complex IEP HCCA
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009650 UV protection IEP HCCA
CC GO:0009898 cytoplasmic side of plasma membrane IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010342 endosperm cellularization IEP HCCA
BP GO:0010466 negative regulation of peptidase activity IEP HCCA
BP GO:0010951 negative regulation of endopeptidase activity IEP HCCA
MF GO:0015204 urea transmembrane transporter activity IEP HCCA
BP GO:0015840 urea transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016572 histone phosphorylation IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
BP GO:0019755 one-carbon compound transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
MF GO:0032442 phenylcoumaran benzylic ether reductase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0045861 negative regulation of proteolysis IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
CC GO:0048555 generative cell nucleus IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052547 regulation of peptidase activity IEP HCCA
BP GO:0052548 regulation of endopeptidase activity IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0070193 synaptonemal complex organization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0098562 cytoplasmic side of membrane IEP HCCA
MF GO:0098599 palmitoyl hydrolase activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 115
PLAZA 3.0 Dicots AT2G37470