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  5. AT2G37620

AT2G37620


Description : actin 1


Gene families : OG_01_0000280 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37620
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cre13.g603700 No alias Cytoskeleton.microfilament network.actin filament protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mpzg00230.1 No alias actin filament protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005856 cytoskeleton TAS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0007010 cytoskeleton organization TAS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0048589 developmental growth IMP Interproscan
BP GO:0048767 root hair elongation IMP Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005884 actin filament IEP HCCA
CC GO:0005938 cell cortex IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009865 pollen tube adhesion IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035023 regulation of Rho protein signal transduction IEP HCCA
BP GO:0035024 negative regulation of Rho protein signal transduction IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0042995 cell projection IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0045177 apical part of cell IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046580 negative regulation of Ras protein signal transduction IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051058 negative regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051703 biological process involved in intraspecies interaction between organisms IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0070382 exocytic vesicle IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
BP GO:0098609 cell-cell adhesion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099503 secretory vesicle IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 5 377
PLAZA 3.0 Dicots AT2G37620