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  5. Zci_05407.1

Zci_05407.1


Description : regulatory protein (COB) of cellulose-hemicellulose network assembly


Gene families : OG_01_0003026 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_05407.1
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Zci_05407.2 No alias no annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_05407.3 No alias no annotation 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_05407.5 No alias no annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_05407.6 No alias regulatory protein (COB) of cellulose-hemicellulose... 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0031225 anchored component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 14 157
No external refs found!