AT2G38340

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_01_0000369 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G38340
Cluster	HCCA: Cluster_33

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009414	response to water deprivation	IEP	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034605	cellular response to heat	IEP	Interproscan
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045893	positive regulation of transcription, DNA-templated	IDA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000026	alpha-1,2-mannosyltransferase activity	IEP	HCCA
MF	GO:0000030	mannosyltransferase activity	IEP	HCCA
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
CC	GO:0000813	ESCRT I complex	IEP	HCCA
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0004376	glycolipid mannosyltransferase activity	IEP	HCCA
MF	GO:0004377	GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	IEP	HCCA
MF	GO:0004448	isocitrate dehydrogenase activity	IEP	HCCA
MF	GO:0004450	isocitrate dehydrogenase (NADP+) activity	IEP	HCCA
MF	GO:0004644	phosphoribosylglycinamide formyltransferase activity	IEP	HCCA
MF	GO:0005343	organic acid:sodium symporter activity	IEP	HCCA
BP	GO:0006464	cellular protein modification process	IEP	HCCA
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
MF	GO:0008508	bile acid:sodium symporter activity	IEP	HCCA
MF	GO:0008864	formyltetrahydrofolate deformylase activity	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
MF	GO:0015125	bile acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015355	secondary active monocarboxylate transmembrane transporter activity	IEP	HCCA
MF	GO:0015370	solute:sodium symporter activity	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
BP	GO:0030148	sphingolipid biosynthetic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0030433	ubiquitin-dependent ERAD pathway	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0036503	ERAD pathway	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
MF	GO:0045140	inositol phosphoceramide synthase activity	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
MF	GO:0070300	phosphatidic acid binding	IEP	HCCA
MF	GO:0080045	quercetin 3'-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0080148	negative regulation of response to water deprivation	IEP	HCCA
MF	GO:0140161	monocarboxylate:sodium symporter activity	IEP	HCCA
BP	GO:2000070	regulation of response to water deprivation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	68	126

External Links

PLAZA 3.0 Dicots	AT2G38340

AT2G38340

Expression Profile

Co-expression Networks

Functional Annotation