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  5. AT2G38680

AT2G38680


Description : 5'-nucleotidases;magnesium ion binding


Gene families : OG_01_0008268 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G38680
Cluster HCCA: Cluster_252


Type GO Term Name Evidence Source
CC GO:0005829 cytosol IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005677 chromatin silencing complex IEP HCCA
BP GO:0006029 proteoglycan metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006352 DNA-templated transcription, initiation IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006493 protein O-linked glycosylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010384 cell wall proteoglycan metabolic process IEP HCCA
BP GO:0010404 cell wall hydroxyproline-rich glycoprotein metabolic process IEP HCCA
BP GO:0010405 arabinogalactan protein metabolic process IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
BP GO:0016233 telomere capping IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018258 protein O-linked glycosylation via hydroxyproline IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0031935 obsolete regulation of chromatin silencing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006434 Pyrimidine_nucleotidase_eu 41 298
PLAZA 3.0 Dicots AT2G38680