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AT2G38730


Description : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein


Gene families : OG_01_0006564 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G38730
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Zci_05572.1 No alias protein folding catalyst 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006457 protein folding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
BP GO:0000338 protein deneddylation IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
BP GO:0000710 meiotic mismatch repair IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
CC GO:0000794 condensed nuclear chromosome IEP HCCA
CC GO:0000795 synaptonemal complex IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0002229 defense response to oomycetes IEP HCCA
BP GO:0002239 response to oomycetes IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004072 aspartate kinase activity IEP HCCA
MF GO:0004407 histone deacetylase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
CC GO:0008180 COP9 signalosome IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0017057 6-phosphogluconolactonase activity IEP HCCA
MF GO:0019202 amino acid kinase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
MF GO:0030371 translation repressor activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0033558 protein deacetylase activity IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034635 glutathione transport IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0042939 tripeptide transport IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045143 homologous chromosome segregation IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046835 carbohydrate phosphorylation IEP HCCA
MF GO:0047012 sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
MF GO:0051766 inositol trisphosphate kinase activity IEP HCCA
BP GO:0051775 response to redox state IEP HCCA
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP HCCA
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP HCCA
BP GO:0052746 inositol phosphorylation IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
MF GO:0070628 proteasome binding IEP HCCA
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEP HCCA
BP GO:0071461 cellular response to redox state IEP HCCA
CC GO:0071782 endoplasmic reticulum tubular network IEP HCCA
BP GO:0071786 endoplasmic reticulum tubular network organization IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
BP GO:0072337 modified amino acid transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0098827 endoplasmic reticulum subcompartment IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 37 197
PLAZA 3.0 Dicots AT2G38730