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Description : component eL33 of LSU proteome component
Gene families : OG_01_0000895 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000895_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zci_06353.1 | |
| Cluster | HCCA: Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G07070 | No alias | Ribosomal protein L35Ae family protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G41880 | No alias | Ribosomal protein L35Ae family protein | 0.1 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G74270 | No alias | Ribosomal protein L35Ae family protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G55750 | No alias | Ribosomal protein L35Ae family protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Cre10.g459250 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp1g11470.1 | No alias | component RPL35a of LSU proteome component | 0.13 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c11_9630V3.1 | No alias | Ribosomal protein L35Ae family protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c13_8360V3.1 | No alias | Ribosomal protein L35Ae family protein | 0.11 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c1_4030V3.1 | No alias | Ribosomal protein L35Ae family protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c3_3480V3.1 | No alias | Ribosomal protein L35Ae family protein | 0.11 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c4_29970V3.1 | No alias | Ribosomal protein L35Ae family protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c7_17970V3.1 | No alias | Ribosomal protein L35Ae family protein | 0.1 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
| BP | GO:0065008 | regulation of biological quality | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001780 | Ribosomal_L35A | 6 | 83 |
| No external refs found! |